CB290341
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL221_DICDI (60S ribosomal protein L22 1 OS=Dictyostelium discoideum GN=rpl22 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.955e-15 Identity = 43/105 (40.95%), Postives = 64/105 (60.95%), Query Frame = 1 Query: 106 FVIHCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEE 420 FVI C P KI+D+A+ EK+L +RIKV K G LG +V ++++K+KI + + FS +RD+LRV+A+ K + YELRYFNI ++E +E Sbjct: 15 FVIDCTAPA-GKIVDVAAFEKYLHDRIKVDNKVGNLGSTVVISKDKSKIIINTTIPFSKRYLKYLTKKFLKFKQIRDFLRVVATTK--NTYELRYFNIGDSESQE 116
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL222_DICDI (60S ribosomal protein L22 2 OS=Dictyostelium discoideum GN=rpl22a PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.466e-14 Identity = 42/105 (40.00%), Postives = 63/105 (60.00%), Query Frame = 1 Query: 106 FVIHCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEE 420 FVI C P KI+D+A+ EK+L +RIKV K LG +V ++++K+KI + + FS +RD+LRV+A+ K + YELRYFNI ++E +E Sbjct: 15 FVIDCTAPA-GKIVDVAAFEKYLHDRIKVDNKVSNLGSNVVISKDKSKIIINTTIPFSKRYLKYLTKKFLKFKQIRDFLRVVATTK--NTYELRYFNIGDSESQE 116
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL22_CAEEL (60S ribosomal protein L22 OS=Caenorhabditis elegans GN=rpl-22 PE=1 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 3.267e-14 Identity = 46/106 (43.40%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 106 FVIHCGKPVEDKIMDIASLEKFLQERIKVGGKAGAL-GDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEE 420 F + C PVED I+ I LE FL E+IKV GK G L ++V V K+K++V S+ FS +++RDWLRV+A NK + YE+RYF+I N+GE+ Sbjct: 23 FNVECKNPVEDGILRIEDLEAFLNEKIKVNGKTGHLAANNVKVEVAKSKVSVVSEVPFSKRYLKYLTKKYLKRNSLRDWLRVVAVNK--NTYEVRYFHI--NDGED 124
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL22A_YEAST (60S ribosomal protein L22-A OS=Saccharomyces cerevisiae GN=RPL22A PE=1 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 2.341e-12 Identity = 37/108 (34.26%), Postives = 57/108 (52.78%), Query Frame = 1 Query: 103 TFVIHCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 426 TF + P E+ + D AS K+L + IKV G G LG++VTVT + T +TV S + FS + +RDW+R +++ + Y L ++ + E EEED Sbjct: 14 TFTVDVSSPTENGVFDPASYAKYLIDHIKVEGAVGNLGNAVTVTEDGTVVTVVSTAKFSGKYLKYLTKKYLKKNQLRDWIRFVSTKTNE--YRLAFYQVTPEEDEEED 119 The following BLAST results are available for this feature:
BLAST of CB290341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290341 ID=CB290341; Name=CB290341; organism=Citrus sinensis; type=EST; length=661bpback to top |