CB290343
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.195e-61 Identity = 108/169 (63.91%), Postives = 128/169 (75.74%), Query Frame = 3 Query: 63 GWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAGSIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 GW HATFY YGNLYS+GYGTNTAALSTALFN+G +CG+C+E++C N C GSI VTATNFC N LP++ GGWCN + HFD+++P F IAQY+AGIVPVS+RRVPC +KGG+RFT+NGHSYFNLVL+TNV G GDVR+VSIKGSRT W Sbjct: 23 GWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGW 191
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.195e-61 Identity = 108/169 (63.91%), Postives = 128/169 (75.74%), Query Frame = 3 Query: 63 GWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAGSIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 GW HATFY YGNLYS+GYGTNTAALSTALFN+G +CG+C+E++C N C GSI VTATNFC N LP++ GGWCN + HFD+++P F IAQY+AGIVPVS+RRVPC +KGG+RFT+NGHSYFNLVL+TNV G GDVR+VSIKGSRT W Sbjct: 23 GWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGW 191
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 1.561e-61 Identity = 111/170 (65.29%), Postives = 129/170 (75.88%), Query Frame = 3 Query: 63 GWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCV---NDPRWCRAGSIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRT 563 GW+ HATFY YGNLYS+GYGTNTAALSTALFNNG+SCGACFE++C C GS+ VTATNFC NNALP++ GGWCN + HFD+SQPVF++IA +KAGIVPVSYRRV C +KGGIRFTINGHSYFNLVL+TNVGG GDV AV++K R+ Sbjct: 63 GWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAGGGGSHSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKSERS 232
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 2.039e-61 Identity = 111/176 (63.07%), Postives = 129/176 (73.30%), Query Frame = 3 Query: 51 VYAQG-WTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAG--SIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 VY G W + HATFY YGNLYS+GYG NTAALSTALFNNG+SCG+CFE+KC+NDP WC G SI +TATNFC N ++ GGWCN ++HFDL+ P+F IA+YKAGIVPVSYRR+PC +KGGIRFTING YFNLVL+TNV G GDV VS+KGS T W Sbjct: 26 VYTGGPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQW 201
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 233.032 bits (593), Expect = 7.748e-61 Identity = 105/171 (61.40%), Postives = 128/171 (74.85%), Query Frame = 3 Query: 63 GWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAGS--IFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 GW HATFY YGNLYS+GYG NTAALSTALFNNG SCGACFE+KC +DP+WC +GS IF+TATNFC N A P++ GGWCN + HFDL+ P+F +IA+Y+AGIVPVS+RRVPC ++GGIRFTING YFNLVL+TNV G G++ + +KG+ T W Sbjct: 30 GWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSW 200
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 3.255e-59 Identity = 108/172 (62.79%), Postives = 123/172 (71.51%), Query Frame = 3 Query: 66 WTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDP--RWCRAGS--IFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 W HATFY YGNLYS+GYG N AALSTALFN+G SCGACFEIKCVN P WC GS I +TATNFC N ALP++ GGWCN + HFDL+ P+F IA+Y+AGIVPVSYRRVPC +KGG+RFTING YFNLVLITNV G GD+ S+KG+ T W Sbjct: 36 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGW 207
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 221.09 bits (562), Expect = 3.047e-57 Identity = 104/169 (61.54%), Postives = 124/169 (73.37%), Query Frame = 3 Query: 63 GWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAGSIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 GW+ ATFY YGNLYS GYGT+TAALSTALFNNG SCGACFE++C C AG++ VTATN C N AL +AGGWCN + HFD+++P F +IAQ +AG+VPV YRRV C+++GGIRFTI GHSYFNLVL+TNVGG GDV AVS+KGSR+ W Sbjct: 26 GWSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGS-CLAGTVAVTATNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVKGSRSGW 193
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 3.979e-57 Identity = 107/169 (63.31%), Postives = 122/169 (72.19%), Query Frame = 3 Query: 66 WTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAG-SIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 W + HATFY YGNLYS+GYG TAALSTALF+ G+SCGACFE+ CVNDP+WC G SI VTATNFC GG C+ HFDLSQP++E+IA YK+GI+PV YRRV C R GGIRFTINGHSYFNLVL+TNVGG GDV +VS+KGSRT W Sbjct: 38 WINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGRSIVVTATNFCP--------PGGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKW 198
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 3.369e-56 Identity = 107/189 (56.61%), Postives = 136/189 (71.96%), Query Frame = 3 Query: 15 LMLLGIXYLVXCVYAQG-----WTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRW-CRAG--SIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGS 557 L+LL LV A G W HATFY YGNLYS+GYGT+TAALSTALFN G+SCG+C+E++C D R C G ++ VTATNFC N ALP++ GGWCN ++HFDL++P F +IA++ AGIVPVS+RRV C+RKGG+RFT+NGH+YFNLVL+TNVGG GDVR++++KGS Sbjct: 6 LLLLASLLLVAARRALGLGLGQWQPGHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHRRSCLPGGATVTVTATNFCPPNYALPSDGGGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKGS 194
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 2.852e-55 Identity = 107/187 (57.22%), Postives = 124/187 (66.31%), Query Frame = 3 Query: 15 LMLLGIXYLVXCVYAQGWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC-VNDPRWCRAG-SIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 ++L + L+ A WT ATFY YG+LY GYGT TAALSTALFN G SCGACF I C +WC+ G SI VTATNFC N AL +AGGWCN ++HFD+SQP +E IA Y+AGIVPV+YRRVPC R GGIRF +NGHSYF LVL+TNVGG G V + IKGS T W Sbjct: 8 VLLASLCALLLTASAAKWTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGTSITVTATNFCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKGSGTGW 194 The following BLAST results are available for this feature:
BLAST of CB290343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290343 ID=CB290343; Name=CB290343; organism=Citrus sinensis; type=EST; length=569bpback to top |