CB290343
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 5.946e-53 Identity = 94/180 (52.22%), Postives = 126/180 (70.00%), Query Frame = 3 Query: 42 VXCVYAQGWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWCRAG-SIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRT-DW 569 V + GW HATFY YGNLY++GYGT TAALSTALFN+G++CG C+++ C D WC+ G S+ +TATNFC N LP+++GGWCN + HFD++QP +E+I Y+ GI+PV Y+RVPC +KGG+RFTINGH YF LVL+TNVG G ++A+ +KGS++ DW Sbjct: 26 VGALEPSGWVRAHATFYGGADASGTMGGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKLVCDRKTDRTWCKPGVSVTITATNFCPPNWDLPSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDVKGSKSPDW 205
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.014e-52 Identity = 94/165 (56.97%), Postives = 124/165 (75.15%), Query Frame = 3 Query: 81 ATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC-VNDPRWCRAG-SIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 ATFY YGNLYS GYGTNTAALS+ALFN+G +CG C++I C ++ +WC+AG S+ +TATN C + + P+N GGWCN +QHFD++QP +EQI Y+ GIVPV+++RV C+RKGG+RFTING+SYF LVLITNVGG G +++V IKG++T W Sbjct: 29 ATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQITCDQSNSKWCKAGTSVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGW 193
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 205.682 bits (522), Expect = 1.325e-52 Identity = 98/174 (56.32%), Postives = 122/174 (70.11%), Query Frame = 3 Query: 57 AQGWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWCRAG-SIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 A GW ATFY YG+LYS GYGTNTAALST LFN+G SCG C+ I C D R+C +G S+ +TATN C N ALPN+AGGWCN +QHFD+++P + +I Y GIVPV Y+RVPC+++GG+RFTING YF LVL++NVGG G +++VSIKGSRT W Sbjct: 31 ASGWNKAFATFYGGSDASGTMGGACGYGDLYSTGYGTNTAALSTVLFNDGASCGQCYRIMCDYQADRRFCISGTSVTITATNLCPPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIKGSRTGW 204
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 1.730e-52 Identity = 103/179 (57.54%), Postives = 124/179 (69.27%), Query Frame = 3 Query: 66 WTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVN----DPRWC---RAG-SIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIK---GSRTDW 569 WTD HATFY YGN Y +GYGT+TAALS +F +G+SCGACFE++C D R C AG SI VTAT+ C N+ALP + GGWCN HFDLSQP F +IA++++GIVPVSYRRV C RKGG+RFTINGHSYFNLVL++NVGG GDV AV++K G + W Sbjct: 30 WTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARW 208
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 204.527 bits (519), Expect = 2.951e-52 Identity = 95/171 (55.56%), Postives = 121/171 (70.76%), Query Frame = 3 Query: 57 AQGWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVN--DPRWCRAG-SIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSR 560 A GW+ ATFY YGNLY++GYGT TAALSTALF++G SCG C+ + C DPRWCRAG S+ VTATNFC N ALP++ GGWCN + HFD++QP +E+I Y+ GIVPV++RRVPC R+GG+RFT+ G YF LVL+TNV G VR++ ++GSR Sbjct: 31 ASGWSKGTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRAGASVTVTATNFCPPNYALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVRGSR 201
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 2.951e-52 Identity = 102/190 (53.68%), Postives = 126/190 (66.32%), Query Frame = 3 Query: 12 GLMLLGIXYL-VXCVYAQGWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVN--DPRWCRAG-SIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 GL +L ++ V G T+ HATFY YG+LYS GYGT TAALSTALFN+G SCG C+ I C + D RWC G S+ +TATNFC N ALPNN GGWCN +HFD++QP +E+I Y+ GIVPV ++RV C +KGG+RF ING YF LV I NVGG G +++VSIKGS+T W Sbjct: 7 GLAVLAALFIAVDAFRPSGLTNGHATFYGGSDASGTMGGACGYGDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAADSRWCLKGASVVITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQRVSCYKKGGVRFRINGRDYFELVNIQNVGGAGSIKSVSIKGSKTGW 196
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 5.565e-51 Identity = 96/166 (57.83%), Postives = 115/166 (69.28%), Query Frame = 3 Query: 81 ATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC-VNDPRWCRAG--SIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 ATFY YGNLY+ GYG AALS+ALFN+G CGAC+ I C + +WC+ G SI +TATN C N ALP+N+GGWCN +QHFD+SQP +E IA Y+AGIVPV+Y+RVPC R GGIRF I+GH YF LV +TNVGG G V +SIKGS T W Sbjct: 33 ATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMSIKGSNTGW 198
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 199.519 bits (506), Expect = 9.493e-51 Identity = 93/172 (54.07%), Postives = 120/172 (69.77%), Query Frame = 3 Query: 66 WTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVND--PRWCRAG-SIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSR-TDW 569 W HATFY YG+LYS+GYGT AALSTALFN+G SCG C++I C P+WCR G ++ +TATNFC N LP++ GGWCN + HFD++QP +E+I Y+AGI+PV Y+RVPC +KGG+RFTINGH YFNLVL+TNV G ++++ + GS TDW Sbjct: 52 WLKAHATFYGGADASGTMGGACGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCRPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGLIKSMDVMGSNSTDW 223
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 199.519 bits (506), Expect = 9.493e-51 Identity = 93/172 (54.07%), Postives = 119/172 (69.19%), Query Frame = 3 Query: 66 WTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVND--PRWCRAG-SIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSR-TDW 569 W HATFY YG+LYS+GYGT AALSTALFN+G SCG C++I C P+WC+ G ++ +TATNFC N LP++ GGWCN + HFD++QP +E+I Y AGI+PV Y+RVPC +KGG+RFTINGH YFNLVL+TNV G ++++ I GS TDW Sbjct: 34 WQKAHATFYGGADASGTMGGGCGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDW 205
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 1.240e-50 Identity = 92/172 (53.49%), Postives = 118/172 (68.60%), Query Frame = 3 Query: 66 WTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVND--PRWCRAG-SIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRT-DW 569 W HATFY YGNLYS+GYGT AALSTALFN+G SCG C++I C P+WC+ G ++ +TATNFC N LP++ GGWCN + HFD++QP +E+I Y AGI+PV Y+RVPC +KGG+RFTINGH YF LVL+TNV G ++++ + GS T DW Sbjct: 39 WQKAHATFYGGADASGTMGGACGYGNLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKSMEVMGSNTADW 210 The following BLAST results are available for this feature:
BLAST of CB290343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290343 ID=CB290343; Name=CB290343; organism=Citrus sinensis; type=EST; length=569bpback to top |