CB290343
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 2.762e-50 Identity = 93/174 (53.45%), Postives = 119/174 (68.39%), Query Frame = 3 Query: 57 AQGWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWCRAGS-IFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 A GW ATFY YGNLY+ GYGTNTAALS+ LFN+G SCG C+ I C P+WCRAG+ + +TATN C N ALP+N+GGWCN + HFD+++P + QI YKAGI+PV Y++V C R+GGIRFT+ G ++F LVL++NV G G VR+VS+KG T W Sbjct: 24 AHGWNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAGAAVTITATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGW 197
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 197.593 bits (501), Expect = 3.607e-50 Identity = 93/172 (54.07%), Postives = 119/172 (69.19%), Query Frame = 3 Query: 66 WTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVND--PRWCRAG-SIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSR-TDW 569 W HATFY Y +LYS+GYGT AALSTALFN+G SCG C++I C P+WC+ G ++ VTATNFC N LP++ GGWCN + HFD++QP +E+I Y+AGI+PV Y+RVPC +KGG+RFTINGH YFNLVL+TNV G ++++ I GS TDW Sbjct: 50 WLKAHATFYGGADASGTMGGACGYVDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTVTATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDW 221
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 197.208 bits (500), Expect = 4.711e-50 Identity = 92/169 (54.44%), Postives = 117/169 (69.23%), Query Frame = 3 Query: 63 GWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAGSIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 GW ATFY YG+L+ +GYG TAALSTALFNNG CGAC+EI C + P+WC GSI +TATNFC + PN+ WCN Q+HFDLSQP+F +IA+YKAG+VPV +RRVPC++ GG++F I G+ +F ++L NVGG G VRA+ IKG+RT W Sbjct: 89 GWGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPGSIKITATNFCPPDFTKPND--NWCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQW 255
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 8.036e-50 Identity = 94/174 (54.02%), Postives = 117/174 (67.24%), Query Frame = 3 Query: 57 AQGWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWCRAGS-IFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 A GW ATFY YGNLY++GYG AALSTALFN G SCG C+ I C P WC+AG+ + +TATN C N AL N+ GGWCN + HFD+SQP +E I Y+AGIVPV Y++V C R+GG+RFT++G +YF LVLITNV G G V+A+S+KGS+T W Sbjct: 24 AGGWVSGTATFYGGKDASGTMGGACGYGNLYTQGYGVYNAALSTALFNGGASCGQCYLIMCDASKTPEWCKAGTAVTITATNLCPPNWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVKGSKTGW 197
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 196.052 bits (497), Expect = 1.050e-49 Identity = 89/168 (52.98%), Postives = 115/168 (68.45%), Query Frame = 3 Query: 66 WTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAGSIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 W D ATFY YGNL+ +GYG TAALSTALFN+G +CGAC+EI C DP+WC GS+ +TATNFC N + + WCN Q+HFDLS +F +IA+YKAG+VPV YRR+PCS+ GG++F G+ YF +VLI NVGG GD++ V +KG++T W Sbjct: 52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGW 217
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.371e-49 Identity = 100/187 (53.48%), Postives = 123/187 (65.78%), Query Frame = 3 Query: 15 LMLLGIXYLVXCVYAQGWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC-VNDPRWCRAG-SIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 L+L + Y V AQ WT ATFY YGNLY+ GYG N AALS+ALFN+G CGAC+ I C + WC+ G SI +TATN C N A ++AGGWCN ++HFD+SQP + IA Y+AGIVPV+++RVPC + GGIRFTI+G YF LV + NVGG G V VSIKGS+TDW Sbjct: 9 LLLCALAY--QAVDAQ-WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGTSITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIKGSKTDW 192
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.371e-49 Identity = 94/171 (54.97%), Postives = 118/171 (69.01%), Query Frame = 3 Query: 63 GWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWCRAG-SIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTD 566 GW HATFY YGNLY++GY TNTAALSTALFN+G SCG C++I C P+WC G SI +TATNFC N A ++ GGWCN + HFD++QP F IA+YKAGIVP+ Y++V C R GG+RFTING +YF LVLI+NV G G++ V IKGS+++ Sbjct: 27 GWLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAALSTALFNDGKSCGGCYQILCDATKVPQWCLKGKSITITATNFCPPNFAQASDNGGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGEISKVWIKGSKSN 197
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 194.897 bits (494), Expect = 2.338e-49 Identity = 87/168 (51.79%), Postives = 114/168 (67.86%), Query Frame = 3 Query: 66 WTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAGSIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 W D ATFY YG+L+ +GYG TAALSTALFN G +CGAC++I CVNDP+WC GS+ +TATNFC + + G WCN Q+HFDLS P+F +IAQYKAG+VPV YRR+ C+R GG++F G+ YF ++L NVGG GD++ + +KG +T W Sbjct: 48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFCPPDYS--KTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGW 213
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 8.885e-49 Identity = 93/173 (53.76%), Postives = 114/173 (65.90%), Query Frame = 3 Query: 57 AQGWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC-VNDPRWCRAG-SIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 AQ WT ATFY YGN+YS GYGTNT ALS+AL+ +G SCGAC+ + C + RWC+ G S+ VTATN+C N + +AGGWCN ++HFD+SQP +E IA Y +GIVPV Y R PC R GGIRF I GH Y+ LVL+TNV G G V A +KGS T+W Sbjct: 24 AQQWTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGTSVTVTATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEW 196
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 8.885e-49 Identity = 88/168 (52.38%), Postives = 114/168 (67.86%), Query Frame = 3 Query: 66 WTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAGSIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 W D ATFY YGNL+ +GYG TAALSTALFN+G +CGAC+EI C DP+WC GS+ +TATNFC N + + WCN Q+HFDLS +F +IA+YKAG+VPV YRR+PCS+ GG++F G+ YF +VLI NVGG GD++ V +K ++T W Sbjct: 58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGW 223 The following BLAST results are available for this feature:
BLAST of CB290343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290343 ID=CB290343; Name=CB290343; organism=Citrus sinensis; type=EST; length=569bpback to top |