CB290343
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 192.2 bits (487), Expect = 1.516e-48 Identity = 86/168 (51.19%), Postives = 114/168 (67.86%), Query Frame = 3 Query: 66 WTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAGSIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 W D ATFY YG+L+ +GYG TAALSTALFN G +CGAC++I CV+DP+WC G+I +TATNFC + + G WCN Q+HFDLS P+F +IAQYKAG+VPV YRR+ C+R GG++F G+ YF ++L NVGG GD++ + +KG +T W Sbjct: 55 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPGTIKITATNFCPPDYS--KTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGW 220
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 192.2 bits (487), Expect = 1.516e-48 Identity = 90/171 (52.63%), Postives = 117/171 (68.42%), Query Frame = 3 Query: 63 GWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVN--DPRWCRAG-SIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTD 566 GW+ ATFY YGNLY GYGTNTAALS+ALFN+G SCG C++I C + +PRWC G ++ +T TN C N AL +N GGWCN + HFD+++P + QI YKAGIVPV Y+RVPC ++GG+RFT+ G +YF LVLI+NV G G +++V +KG TD Sbjct: 31 GWSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTD 201
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 5.759e-48 Identity = 91/174 (52.30%), Postives = 114/174 (65.52%), Query Frame = 3 Query: 57 AQGWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDP--RWCRA-GSIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 A W ATFY YGNLY +GYG AALSTALFN+G +CG C+ I C D RWC+ G++ VTATN C N ALP++ GGWCN ++HFD+SQP +E+I Y+AGIVPV YRRV C R+GG+RFT+ G +F LVL+ NV G G V AVS++G+ T W Sbjct: 24 ADDWIPATATFYGGNDGSGTMGGACGYGNLYDQGYGLENAALSTALFNDGAACGQCYLIVCDTDKAGRWCKPRGAVTVTATNLCPPNWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGW 197
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 189.119 bits (479), Expect = 1.283e-47 Identity = 92/171 (53.80%), Postives = 114/171 (66.67%), Query Frame = 3 Query: 66 WTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVND--PRWCRAGS-IFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 W+ ATFY YGNLY +GYG + AALS ALFN+G SCG C+ I C P+WC+AG+ + VTATN C N ALP++ GGWCN + HFD+SQP +EQI Y+AGIVPV Y+RV C R+GG+RFT+ G +YF LVLITNV G G V + IKG+ T W Sbjct: 28 WSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGTAVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGW 198
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.189e-47 Identity = 90/171 (52.63%), Postives = 111/171 (64.91%), Query Frame = 3 Query: 66 WTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAGS--IFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGS-RTDW 569 W HATFY Y + EGYG T A+ST LF G CGAC+E+KCV+ P C+ G+ + VTATN C N N+ GGWCN ++HFDLS P F QIAQ KAGIVP+SYRRVPC + GGIR+TI G+ YFNLV+++NVGG GDV +S+KG+ R W Sbjct: 42 WKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKW 212
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 6.368e-47 Identity = 83/168 (49.40%), Postives = 111/168 (66.07%), Query Frame = 3 Query: 66 WTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAGSIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 W HATFY YGNL++ GYG +TAALST LFN+G CG CF+I C P S VTATN C N +NAGGWCN + HFD+++P F ++A ++AGI+PV+YRRVPC R GG+RF G+SY+ L+ + NVGG GD++++++KGSRT+W Sbjct: 37 WRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNW 204
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 185.652 bits (470), Expect = 1.419e-46 Identity = 96/188 (51.06%), Postives = 113/188 (60.11%), Query Frame = 3 Query: 15 LMLLGIXYLVXCVYAQGWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVND--PRWCRAGS-IFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 L LL I L GW ATFY YGNLY +GYG N AALST LFNNG SCG C+ I C D P CR G+ I VT TNFC N LP GGWCN + HFD+SQP +E I Y AGIVP+ Y++V C R GG+RFTI G +YF LVL+TN+ G G + ++S+KGS T W Sbjct: 6 LQLLAILALCIAPARSGWLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGTAITVTGTNFCPPNYDLPY--GGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGW 191
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.048e-45 Identity = 91/188 (48.40%), Postives = 113/188 (60.11%), Query Frame = 3 Query: 15 LMLLGIXYLVXCVYAQGWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWCRAG-SIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 L LL + L W ATFY YGNLY +GYG N AALST LFN+G SCG C+ I C P WC+ G +I VT TN+C N LP GGWCN + HFD+SQP +E I Y AGI+P+ Y++V C R GG+RFTING +YF LVL+TN+ G G + ++S+KGS T W Sbjct: 6 LQLLAVVALCIAPARSDWLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYCPPNYDLPY--GGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGW 191
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.048e-45 Identity = 87/170 (51.18%), Postives = 108/170 (63.53%), Query Frame = 3 Query: 66 WTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAGS--IFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 W ATFY YGN+Y GYG T ALSTALFN G +CG CF++KCV+ P C GS VTATN C N +N GGWCN + HFDL++P F +IA +KAGI+PVSYRRV C + GGIRF G+ Y+ LV + NVGG GD++ +++KGSRT W Sbjct: 31 WRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGW 199
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.374e-41 Identity = 84/172 (48.84%), Postives = 111/172 (64.53%), Query Frame = 3 Query: 57 AQGWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWC-RAGSIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQY-KAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSR 560 + GW HAT+Y Y N Y G+G +TAALS LF +G SCG C++++C DP+WC R ++ VTATNFC NN NN GWCNL + HFD+S P F +IA+ GIVPV YRRV C R+GG+RFT+ G FN+V+I+NVGG G VR+V+++GS+ Sbjct: 24 SNGWIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTATNFCPTNN---NN--GWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSK 190 The following BLAST results are available for this feature:
BLAST of CB290343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290343 ID=CB290343; Name=CB290343; organism=Citrus sinensis; type=EST; length=569bpback to top |