CB290361
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_MOUSE (60S ribosomal protein L3 OS=Mus musculus GN=Rpl3 PE=2 SV=2) HSP 1 Score: 326.25 bits (835), Expect = 1.225e-88 Identity = 156/250 (62.40%), Postives = 194/250 (77.60%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 788 MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V++PGSK++KKE EAVTI+ETPP+ +TPRGLR+ TV+A+H+++E +RRFYKNW + D GKK ++ MKKYC VIR++AHTQ+R + L+QKKAHLMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLR Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLR 249
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_BOVIN (60S ribosomal protein L3 OS=Bos taurus GN=RPL3 PE=2 SV=2) HSP 1 Score: 325.094 bits (832), Expect = 2.730e-88 Identity = 155/250 (62.00%), Postives = 193/250 (77.20%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 788 MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V++PGSK++KKE EAVTI+ETPP+ +TPRGLR+ T++A+H+++E +RRFYKNW + DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAHLME+QVNGG+VA+K+D+A E+Q+P+ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLR Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLR 249
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_TOXCA (60S ribosomal protein L3 OS=Toxocara canis GN=RPL3 PE=2 SV=2) HSP 1 Score: 321.627 bits (823), Expect = 3.018e-87 Identity = 152/250 (60.80%), Postives = 190/250 (76.00%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 788 MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDP+KP LTAF+ +KAGMTHIVR+V+KPGSK++KKE EAVTI E PP+ TPRG R TVWA+HL+E+ R RFYKNW + +DG+K I+A L KMKKYC+ IRV+AHTQ++ MK ++KKAH+MEIQ+NGG+VA+KVD+A EKQ+P+D+VF +DEMID IGVTKGKG++GV +RW +LPRKTH+GLR Sbjct: 1 MSHRKFSAPRHGSMGFTPKKRSKRHRGKVKAFPKDDPTKPIHLTAFIAFKAGMTHIVREVDKPGSKVNKKEVVEAVTIFEAPPMVIVGIVGYIDTPRGPRQFKTVWAEHLSEDCRGRFYKNWHTSKKKAFQKHAKKWQDEDGRKSIEADLNKMKKYCSKIRVIAHTQMKVMKH-REKKAHIMEIQINGGTVAEKVDWAREHLEKQVPVDSVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKLPRKTHKGLR 249
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_DICDI (60S ribosomal protein L3 OS=Dictyostelium discoideum GN=rpl3 PE=1 SV=2) HSP 1 Score: 313.923 bits (803), Expect = 6.294e-85 Identity = 150/251 (59.76%), Postives = 192/251 (76.49%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWC-XXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 788 MSHRKFE PRHG+LGF PRKRA+RH+GKVK+FPKDD ++ LTAF+GYKAGMTH+VRD+EKPGSK+HKKE EAVTIIE PP+ +T +GL++ TVWAQHL++ RRR YKNW ET++GKK I+A L+ +KK C+V+RV+AHTQ+ K+K L QKKAH++EIQVNGGS+ +KV+FA FEK + + VF ++E+ID+IGVTKGKG+ GV+ RWGV +LPRKTH+GLR Sbjct: 1 MSHRKFEAPRHGNLGFRPRKRAARHQGKVKSFPKDDRTQKVHLTAFMGYKAGMTHVVRDLEKPGSKMHKKEIVEAVTIIECPPMYIVGLVGYVETAQGLKTYKTVWAQHLSDNFRRRLYKNWYKSKSKKAFTKYVKQYETEEGKKSIEASLQAIKKRCSVVRVIAHTQVHKLK-LTQKKAHVLEIQVNGGSIVEKVNFAVANFEKTVNVTGVFAENELIDVIGVTKGKGFNGVIKRWGVRKLPRKTHKGLR 250
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_CAEBR (60S ribosomal protein L3 OS=Caenorhabditis briggsae GN=rpl-3 PE=3 SV=2) HSP 1 Score: 311.612 bits (797), Expect = 3.124e-84 Identity = 148/250 (59.20%), Postives = 187/250 (74.80%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 788 MSHRKF PRHG +GF P+KR+ +RG++KAFPKDD SKP LTAFLGYKAGMTHIVRDV+KPGSK++KKE EAV+IIETPP+ TP+G R+L T+WA+HL+EE RRRFY NW + +DGKK I+A K+KKYC+ IRV+AHTQ++ ++ +QKKAHL+EIQ+NGG++ QKVD+A EKQI +D VF +DEMID IGVTKG G++GV +RW +LPRKTH+GLR Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDASKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVSIIETPPMVIAGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILR-RRQKKAHLVEIQINGGTIEQKVDWAREHLEKQIQVDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKKLPRKTHKGLR 249
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_CAEEL (60S ribosomal protein L3 OS=Caenorhabditis elegans GN=rpl-3 PE=1 SV=1) HSP 1 Score: 311.227 bits (796), Expect = 4.080e-84 Identity = 147/250 (58.80%), Postives = 187/250 (74.80%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 788 MSHRKF PRHG +GF P+KR+ +RG++KAFPKDD SKP LTAFLGYKAGMTHIVRDV+KPGSK++KKE EAVTI+ETPP+ TP+G R+L T+WA+HL+EE RRRFY NW + +DGKK I+A K+KKYC+ IRV+AHTQ++ ++ +QKKAHL+EIQVNGG++ QKVD+A EKQ+ +D VF +DEMID IGVT+G G++GV +RW +LPRKTH+GLR Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILR-RRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLR 249
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_DEBHA (60S ribosomal protein L3 OS=Debaryomyces hansenii GN=RPL3 PE=3 SV=1) HSP 1 Score: 308.916 bits (790), Expect = 2.025e-83 Identity = 151/250 (60.40%), Postives = 187/250 (74.80%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 788 MSHRK+E PRHGSLGFLPRKR++ RG+VK+FPKD SKP LTAFLGYKAGMT +VRD+++PGSK+HK+E EA T+++TPPL +TPRGLRSL TVWA+HL+EEVRRRFYKNW D + ++ +L ++KKY +V+RVLAHTQI+K L QKKAHL EIQVNGGSV+ KVD+A FEK + +D+VF+KDEM+D+ VTKG G+EGV RWG +LPRKTHRGLR Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRSANIRGRVKSFPKDVKSKPVALTAFLGYKAGMTTVVRDLDRPGSKMHKREIVEAATVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYKNWYKSKKKAFTKYSAKYAQDGAQ--VERELARIKKYASVVRVLAHTQIKKTP-LAQKKAHLAEIQVNGGSVSDKVDWAKEHFEKTVSVDSVFEKDEMVDVAAVTKGHGFEGVTHRWGTKKLPRKTHRGLR 247
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_ASHGO (60S ribosomal protein L3 OS=Ashbya gossypii GN=RPL3 PE=3 SV=1) HSP 1 Score: 308.916 bits (790), Expect = 2.025e-83 Identity = 150/250 (60.00%), Postives = 189/250 (75.60%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 788 MSHRK+E PRHG LGFLPRKRA+ RG+VKAFPKDD SKP LT+FLGYKAGMT IVRD+++PGSK HK+E EAV++++TPP+ +TPRGLRSL TVWA+HL++E++RRFYKNW DG I+ +L ++KKY +V+RVLAHTQ+RK L QKKAHL EIQ+NGGSV++KVD+A FEK + +D+VF+++EMID+I VTKG G+EGV RWG +LPRKTHRGLR Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRGRVKAFPKDDKSKPVALTSFLGYKAGMTTIVRDLDRPGSKFHKREIVEAVSVVDTPPMVVVGVVGYIETPRGLRSLTTVWAEHLSDEIKRRFYKNWYKSKKKAFTQVPPPSTAQDGAA-IERELARIKKYASVVRVLAHTQVRKTP-LVQKKAHLAEIQLNGGSVSEKVDWAREHFEKTVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLPRKTHRGLR 248
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_DROME (60S ribosomal protein L3 OS=Drosophila melanogaster GN=RpL3 PE=1 SV=3) HSP 1 Score: 303.523 bits (776), Expect = 8.506e-82 Identity = 147/250 (58.80%), Postives = 181/250 (72.40%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 788 MSHRKF PRHGS+ F P+KR++RHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+ ++PGSK++KKE EAVT++ETPP+ +TP GLR+L VWAQHL+EE RRRFYKNW D GKK I+ KM +YC VIRV+AH+QIR +K +QKKAH+MEIQ+NGGS+ KV +A EK I + VF +DEMID +GVTKGKG++GV +RW +LPRKTH+GLR Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIK-QRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLR 249
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_CANGA (60S ribosomal protein L3 OS=Candida glabrata GN=RPL3 PE=3 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 8.506e-82 Identity = 148/250 (59.20%), Postives = 187/250 (74.80%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 788 MSHRK+E PRHG LGFLPRKRA+ RG+VK+FPKDD SKP LT+FLGYKAGMT IVRD+++PGSK HK+E EAVT+++TPP+ +TPRGLRSL TVWA+HL++EV+RRFYKNW + +I+ +L ++KKY TV+RVL HTQ+RK L QKKAHL EIQ+NGGS+++KVD+A FEK + +D+VF+++EMID I VTKG G+EGV RWG +LPRKTHRGLR Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDKSKPVALTSFLGYKAGMTTIVRDLDRPGSKFHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYSAKYAQNGA--EIERELARIKKYATVVRVLVHTQVRKTP-LVQKKAHLAEIQLNGGSISEKVDWAREHFEKTVSVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLR 247 The following BLAST results are available for this feature:
BLAST of CB290361 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290361 ID=CB290361; Name=CB290361; organism=Citrus sinensis; type=EST; length=788bpback to top |