CB290361
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_YEAST (60S ribosomal protein L3 OS=Saccharomyces cerevisiae GN=RPL3 PE=1 SV=4) HSP 1 Score: 302.368 bits (773), Expect = 1.895e-81 Identity = 149/250 (59.60%), Postives = 185/250 (74.00%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 788 MSHRK+E PRHG LGFLPRKRA+ R +VKAFPKDD SKP LT+FLGYKAGMT IVRD+++PGSK HK+E EAVT+++TPP+ +TPRGLRSL TVWA+HL++EV+RRFYKNW D I+ +L ++KKY +V+RVL HTQIRK L QKKAHL EIQ+NGGS+++KVD+A FEK + +D+VF+++EMID I VTKG G+EGV RWG +LPRKTHRGLR Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDLDRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYSAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTP-LAQKKAHLAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLR 247
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_KLULA (60S ribosomal protein L3 OS=Kluyveromyces lactis GN=RPL3 PE=3 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 7.201e-81 Identity = 145/250 (58.00%), Postives = 186/250 (74.40%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 788 MSHRK+E PRHG LGFLPRKRA+ RG+VK+FPKDD +KP LT+FLGYKAGM+ IVRD+++PGSK HK+E EAVT+++TPP+ +TPRGLRSL TVWA+HL++EV+RRFYKNW + + D +L ++KKY +V+RVL HTQ+RK L QKKAHL EIQ+NGGSV+ KVD+A FEK + +D+VF+++EMID++ VTKG G+EGV RWG +LPRKTHRGLR Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDLDRPGSKFHKREVVEAVTVVDTPPIVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYSAKYAENGAQVD--RELARIKKYASVVRVLVHTQVRKTP-LSQKKAHLAEIQLNGGSVSDKVDWAKEHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKLPRKTHRGLR 247
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3L_HUMAN (60S ribosomal protein L3-like OS=Homo sapiens GN=RPL3L PE=1 SV=3) HSP 1 Score: 295.819 bits (756), Expect = 1.774e-79 Identity = 142/250 (56.80%), Postives = 179/250 (71.60%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 788 MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V +PG K+ K+E EAVTI+ETPPL TPRGLRS T++A+HL++E RRRFYK+W DGKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH+MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +LPRKTH+GLR Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVHRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKDWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLR 249
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3L_BOVIN (60S ribosomal protein L3-like OS=Bos taurus GN=RPL3L PE=2 SV=3) HSP 1 Score: 295.434 bits (755), Expect = 2.317e-79 Identity = 141/250 (56.40%), Postives = 180/250 (72.00%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 788 MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V +PG K+ K+E EAVTI+ETPPL TPRGLRS T++A+HL++E RRRFYK+W DGKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH+ME+Q+NGG+VA+KV +A EKQ+P+ +VF ++E+ID+I VTKG+G +GV +RW +LPRKTH+GLR Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVHRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKDWHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAHIMEVQLNGGTVAEKVAWAQARLEKQVPVHSVFSQNEIIDVIAVTKGRGIKGVTSRWHTKKLPRKTHKGLR 249
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_ENCCU (60S ribosomal protein L3 OS=Encephalitozoon cuniculi GN=RPL3-1 PE=1 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 8.036e-48 Identity = 109/251 (43.43%), Postives = 148/251 (58.96%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD-VEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 788 MS RKF PRHGSL F PRKR+ R AFP DD S+P LT F+ YKAGMTH+VR + +K +E +AVT++E PP+ KT GLR L V A ++++ V RR + N ++++E +K+ +RVL TQ +KGL KKAH+ EIQVNGGS+++KV++A G EK+I I VF +E ID IGVTKGKG++G V R+GV + PRK+ +G+R Sbjct: 1 MSCRKFNAPRHGSLQFCPRKRSKTIRPAAGAFPADDRSQPVHLTGFMAYKAGMTHVVRTKTQVAKNKQLSREIMDAVTVLEAPPMVVYGIVGYEKTVTGLRRLPIVTAAYVSDGVLRRMFGNRYASKESAGQFCKGSV--------CESRVEMIKERAHCVRVLVQTQPTLIKGLGLKKAHIAEIQVNGGSISEKVEWALGRLEKEIAIGEVFGVNENIDTIGVTKGKGFQGTVKRFGVRKQPRKSRKGIR 243
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_AERPE (50S ribosomal protein L3P OS=Aeropyrum pernix GN=rpl3p PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.216e-36 Identity = 101/255 (39.61%), Postives = 140/255 (54.90%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTP-RGLRSLCTVWAQHLNE-EVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKV-DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLR 788 M RK PR GSLGF PRKRASR +VK +P+ D KP L AFLGY+AGMTH+ ++PG KE VTI+ETPP+ P RG SL WAQ E E++RR +TD K ++ +L+K + +R++A +Q + GL +KK L+EI+V G S K+ D+A I ++ VF++ +++D+I VTKGKG++GV+ RWGV LPR K +G R Sbjct: 1 MGARKKRAPRRGSLGFSPRKRASRLVPRVKRWPEVDIGKPVPL-AFLGYRAGMTHVFMVDDRPGRPTSGKEIFVPVTIVETPPMFVAAVRLYGYDPNRGRYSLGEAWAQPPPELELQRRI-------------STLGSFDTDKMLKSLEERLDKAED----VRLIAASQPKLAGGLSKKKPDLLEIKVGGVSDVTKLFDYAKDVLGNLIAVNDVFEEGQLVDVIAVTKGKGFQGVIKRWGVKELPRWHKHRKGSR 237
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_SULTO (50S ribosomal protein L3P OS=Sulfolobus tokodaii GN=rpl3p PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.926e-31 Identity = 84/252 (33.33%), Postives = 130/252 (51.59%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLR 788 M HRK PR GS G PRKRAS +++P ++P +L F+GYK GM+HI +KP S + KE V++IETPP+ P+G + T + ++E++ + + E GK D ++ +RVL TQ + + L +KK ++E+QV GG + ++++ K + + VF++ ++IDIIGVTKGKG++GVV R+GV LPR K +G R Sbjct: 1 MGHRKLASPRRGSAGVRPRKRASEILPTPRSWPTIQSNEP-KLLGFVGYKVGMSHIFMIDDKPTSPNYGKEIYVPVSVIETPPVIPLAIRAYVMGPKGEPTTLTEYWGDISEDLLKLIQQR-------KVTRLKIDKEKMKGKLD---EINNKLNDILYLRVLIATQPKLVPSLGKKKPEIVEVQVGGGDIKSQLNYVLNILGKPLSVKDVFKEGQLIDIIGVTKGKGFQGVVKRYGVVELPRWHKHRKGSR 241
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_SULAC (50S ribosomal protein L3P OS=Sulfolobus acidocaldarius GN=rpl3p PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.926e-31 Identity = 88/254 (34.65%), Postives = 129/254 (50.79%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRG-LRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGK-KDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLR 788 M HRK PR GS G PRKRA K +P + +P +L F+GYKAGMTH+ +KP S + KE VTI+E+PP+ +G L L WA EE ++ K + D K K+ ++K T +R+L TQ + L +K+ ++EIQ+ GGS+ ++++ KQIP+ VF++ ++ DIIGVTKGKG++GV+ R+ V PR K +G R Sbjct: 1 MGHRKLSSPRRGSAGLRPRKRADEILPTPKNWPLVNLKEP-KLLGFIGYKAGMTHVYMIDDKPTSPNYGKEVYTPVTIVESPPILGLALRAYHIDSKGELSVLVDYWANF--EEGSLKYLKR-----------KITSLKVDSSKMKEKLDLIQKNLNNITYMRLLVSTQPWLVPSLGKKRPEIVEIQIGGGSIQDQLNYGLSLLGKQIPVRDVFREGQLTDIIGVTKGKGFQGVIKRYSVVEFPRWHKHRKGSR 240
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_ARCFU (50S ribosomal protein L3P OS=Archaeoglobus fulgidus GN=rpl3p PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.597e-30 Identity = 79/243 (32.51%), Postives = 126/243 (51.85%), Query Frame = 3 Query: 51 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 779 K+ PR GSL F PRKRA +++A+P+ D R+ F GYKAGMTH+V ++ S + +E VT+IETPP+ KT G++ VW+ +L++ + RR + D++ ++ + +RV+ +TQ + G+ +K +ME ++ GG+V + +D+A K+I + VF + +ID+I VTKGKG++G V RWGV L K R Sbjct: 2 KYHRPRRGSLAFSPRKRAKSIVPRIRAWPECDR---VRMQGFAGYKAGMTHVVMIDDRKNSPTYGEEVVVPVTVIETPPMKVAAVRVYKKTQYGMQIAAEVWSNNLDDFLDRRL-------------------NLPKKEPDVEKLKAAVENGASEVRVVTYTQPYLITGVPKKVPDVMEHRI-GGNVEEALDYAISKLGKEISVSEVFDEGAIIDVIAVTKGKGFQGPVKRWGVITLDAKHAR 221
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_METMP (50S ribosomal protein L3P OS=Methanococcus maripaludis GN=rpl3p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.786e-30 Identity = 79/234 (33.76%), Postives = 122/234 (52.14%), Query Frame = 3 Query: 51 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 752 K PR GSL F PRKRA + K++++P D K L AF YKAG TH + P S +E VT++ETP + KT +GL++L VWA+ L+ ++ R+ + KK + A L+ + + T +R + HT K G+ +KK ++EI++ G SVA+++ +A K + I VF+ E+ID + +TKGKG++G V RWG+ Sbjct: 4 KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPKSPNSSQEVFTPVTVLETPDVTVAGIRLYEKTTKGLKALTEVWAEQLDSDLGRKL-----------------TLAKKEEKKTVDA-LDAVLEKATEVRAIVHTN-PKTTGIPKKKPEVVEIRIGGSSVAERLAYAKEILGKTLAISDVFEAGEIIDTLAITKGKGFQGSVKRWGI 215 The following BLAST results are available for this feature:
BLAST of CB290361 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290361 ID=CB290361; Name=CB290361; organism=Citrus sinensis; type=EST; length=788bpback to top |