CB290361
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_SULSO (50S ribosomal protein L3P OS=Sulfolobus solfataricus GN=rpl3p PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.431e-28 Identity = 85/262 (32.44%), Postives = 130/262 (49.62%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCT-VWAQHLNE--EVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQ----AQLEKMKKYCTVI---RVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLR 788 M HRK PR GS G PRKR+S + +P+ + P +L F+GYK GMTH+ + P S + KE VT++E PP+ +G ++ T W+ + ++ RR + + D+ KK +L+ +K I R+L TQ RK+ L +K L+EIQ+ GG ++D+A K+I I VF++ ++ID++GVTKGKG+ GV+ R+ V LPR K +G R Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSQNP-KLLGFVGYKVGMTHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAIDGKGEPNVITEYWSSSSLQFLDITRRIHS------------ISSFLKDDESKKKFDERFNTKLDLIKSNLDRIVYFRLLVSTQPRKIPSLGKKAPDLVEIQIGGGEKKSQLDYALNILGKEITIRDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSR 249
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_PYRAE (50S ribosomal protein L3P OS=Pyrobaculum aerophilum GN=rpl3p PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.175e-28 Identity = 84/245 (34.29%), Postives = 126/245 (51.43%), Query Frame = 3 Query: 51 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRG--LRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTV---IRVLAHTQIRKMKGLKQKKAHLMEIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 767 K PR GS+G PRKRA+ +V+ +P+ + KP L F YKAGM H V ++P S L+ KE +AVT+++ PPL P R++ VWA L + + R T K D+ QL+K++++ V +R L TQ + G+ +K L+EI + G SV ++++FA K + VF +++D+I VTKGKGY+GV+ R+GVT LPR Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPA-LLGFAAYKAGMLHAVVVDDRPTSPLYGKEVVKAVTVLDAPPLYVWGFRLYTLDPTNGYKRAVAEVWASELPKFLHRVL--------------------TLPEKLDVDKQLKKVEEFRDVAVDVRALVATQPH-LSGIGKKTPELLEIPIGGVPSVDERINFAISLLGKTVSPKDVFTPGQLVDVIAVTKGKGYQGVIKRFGVTILPR 226
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_SULIA (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain M.16.27) GN=rpl3p PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.415e-28 Identity = 86/264 (32.58%), Postives = 134/264 (50.76%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCT-VWA----QHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQ----AQLEKMKKYCTVI---RVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLR 788 M HRK PR GS G PRKR+S + +P+ + P +L F+GYK GM+H+ + P S + KE VT++E PP+ +G ++ T W+ Q L+ R R + ++ + D+ KK + ++L+ +K I R+L TQ RK+ L +K L+EIQ+ GG ++D+A K+I I VF++ ++ID++GVTKGKG+ GV+ R+ V LPR K +G R Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRRIRSFSSFL--------------KNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVATQPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSR 249
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_METTP (50S ribosomal protein L3P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl3p PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.415e-28 Identity = 75/239 (31.38%), Postives = 120/239 (50.21%), Query Frame = 3 Query: 63 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 779 PR GSL F PRKRA +++++ D+ + + F GYKAGMTH++ ++P S E VT++E PP+ G+R +WA++L++++ R +DI+++++++ + IRVLAHT R + G+ +K +MEI V G SV +++ A G Q+ + +F E ID+ VTKGKG +G V RWG+ RK R Sbjct: 7 PRRGSLAFSPRKRAKSEVPRIRSWVADERAG---MAGFAGYKAGMTHVIMIDDRPRSLTEGMEISVPVTVVEVPPMSVAALRVYEPYNGGIRPAGELWAENLSQDLERAI--------------TIPKARRGASLEDIESRVDELCE----IRVLAHTNPRLLTGVPKKVPDIMEIPVTGRSVEEQLKAAEGLLGSQVAVSNIFNVGEWIDVSAVTKGKGTQGPVKRWGIMLQKRKHSR 224
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_SULIY (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.073e-28 Identity = 84/262 (32.06%), Postives = 132/262 (50.38%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCT-VWAQHLNE--EVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQ----AQLEKMKKYCTVI---RVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLR 788 M HRK PR GS G PRKR+S + +P+ + P +L F+GYK GM+H+ + P S + KE VT++E PP+ +G ++ T W+ + ++ RR + + D+ KK + ++L+ +K I R+L TQ RK+ L +K L+EIQ+ GG ++D+A K+I I VF++ ++ID++GVTKGKG+ GV+ R+ V LPR K +G R Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRRIHS------------LSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVATQPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSR 249
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_SULIN (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl3p PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.073e-28 Identity = 84/262 (32.06%), Postives = 132/262 (50.38%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCT-VWAQHLNE--EVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQ----AQLEKMKKYCTVI---RVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLR 788 M HRK PR GS G PRKR+S + +P+ + P +L F+GYK GM+H+ + P S + KE VT++E PP+ +G ++ T W+ + ++ RR + + D+ KK + ++L+ +K I R+L TQ RK+ L +K L+EIQ+ GG ++D+A K+I I VF++ ++ID++GVTKGKG+ GV+ R+ V LPR K +G R Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRRIHS------------LSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVATQPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSR 249
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_SULIM (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.073e-28 Identity = 84/262 (32.06%), Postives = 132/262 (50.38%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCT-VWAQHLNE--EVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQ----AQLEKMKKYCTVI---RVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLR 788 M HRK PR GS G PRKR+S + +P+ + P +L F+GYK GM+H+ + P S + KE VT++E PP+ +G ++ T W+ + ++ RR + + D+ KK + ++L+ +K I R+L TQ RK+ L +K L+EIQ+ GG ++D+A K+I I VF++ ++ID++GVTKGKG+ GV+ R+ V LPR K +G R Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRRIHS------------FSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVATQPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSR 249
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_SULIL (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.073e-28 Identity = 84/262 (32.06%), Postives = 132/262 (50.38%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCT-VWAQHLNE--EVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQ----AQLEKMKKYCTVI---RVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLR 788 M HRK PR GS G PRKR+S + +P+ + P +L F+GYK GM+H+ + P S + KE VT++E PP+ +G ++ T W+ + ++ RR + + D+ KK + ++L+ +K I R+L TQ RK+ L +K L+EIQ+ GG ++D+A K+I I VF++ ++ID++GVTKGKG+ GV+ R+ V LPR K +G R Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRRIHS------------LSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVATQPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSR 249
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_SULIK (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl3p PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.073e-28 Identity = 84/262 (32.06%), Postives = 132/262 (50.38%), Query Frame = 3 Query: 39 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCT-VWAQHLNE--EVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQ----AQLEKMKKYCTVI---RVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLR 788 M HRK PR GS G PRKR+S + +P+ + P +L F+GYK GM+H+ + P S + KE VT++E PP+ +G ++ T W+ + ++ RR + + D+ KK + ++L+ +K I R+L TQ RK+ L +K L+EIQ+ GG ++D+A K+I I VF++ ++ID++GVTKGKG+ GV+ R+ V LPR K +G R Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRRIHS------------FSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVATQPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSR 249
BLAST of CB290361 vs. ExPASy Swiss-Prot
Match: RL3_PYRAR (50S ribosomal protein L3P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rpl3p PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.576e-27 Identity = 83/245 (33.88%), Postives = 124/245 (50.61%), Query Frame = 3 Query: 51 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRG--LRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTV---IRVLAHTQIRKMKGLKQKKAHLMEIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 767 K PR GS+G PRKRA+ +V+ +P + KP L F YKAGM H V ++P S L+ KE +AVT+++ PPL P LRS VWA L + + R T K D+ Q++++++Y V +R L TQ + G+ +K L+EI + G ++ +++ FA K + VF +++D+I VTKGKG++GVV R+GVT LPR Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRTWPDVNLGKPA-LLGFAAYKAGMLHAVVVDDRPTSPLYGKEVVKAVTVLDAPPLFVWGFRLYTLDPTNGYLRSAAEVWAGELPKHLSRVL--------------------TLPEKVDVDKQMKQVEEYRDVAVEVRALVATQPH-LSGIGKKTPELLEIPIGGVPNIDERIKFAISLLGKTVSPKDVFSPGQLVDVIAVTKGKGWQGVVKRFGVTILPR 226 The following BLAST results are available for this feature:
BLAST of CB290361 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290361 ID=CB290361; Name=CB290361; organism=Citrus sinensis; type=EST; length=788bpback to top |