CB290379

Overview
NameCB290379
Unique NameCB290379
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig129 contig Csv1_Contig129:181..1027. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB290379 vs. ExPASy Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.077e-12
Identity = 31/60 (51.67%), Postives = 36/60 (60.00%), Query Frame = -3 
Query:  663 FRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCP 842
            F+  QYCCN       +C P+ YS+ FK  CP AYSY  DD  STFTC  G DY + FCP
Sbjct:  148 FKTDQYCCNSG-----SCGPTDYSRFFKQRCPDAYSYPKDDPPSTFTCNGGTDYRVVFCP 202
[Close]
BLAST of CB290379 vs. ExPASy Swiss-Prot
Match: IAAT_MAIZE (Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.713e-12
Identity = 30/60 (50.00%), Postives = 40/60 (66.67%), Query Frame = -3 
Query:  663 FRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCP 842
            F++ +YCC G  S  + C P+ YS+ FK  CP AYSY  DD +STFTC +G +Y + FCP
Sbjct:  149 FKKDEYCCVG--SAANNCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206
[Close]
BLAST of CB290379 vs. ExPASy Swiss-Prot
Match: ZEAM_MAIZE (Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.543e-12
Identity = 30/60 (50.00%), Postives = 40/60 (66.67%), Query Frame = -3 
Query:  663 FRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCP 842
            F++ +YCC G  S  + C P+ YS+ FK  CP AYSY  DD +STFTC +G +Y + FCP
Sbjct:  170 FKKDEYCCVG--SAANDCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 227
[Close]
BLAST of CB290379 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.759e-11
Identity = 28/56 (50.00%), Postives = 38/56 (67.86%), Query Frame = -3 
Query:  663 QYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCP 830
            +YCC G +++P  C+P+ +S +FK+ CP AYSYAYDD +S   C     Y ITFCP
Sbjct:  195 RYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDDATSLNRC-HAKRYLITFCP 249
The following BLAST results are available for this feature:
BLAST of CB290379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
P21_SOYBN2.077e-1251.67Protein P21 OS=Glycine max PE=1 SV=1[more]
IAAT_MAIZE2.713e-1250.00Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 S... [more]
ZEAM_MAIZE3.543e-1250.00Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2[more]
TLPH_ORYSJ1.759e-1150.00Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01bb03_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01bb03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290379 ID=CB290379; Name=CB290379; organism=Citrus sinensis; type=EST; length=844bp
TTTTTTTTTTTTTTTAAAAAAAATCATTTATTGGATACCCAATGAGCGGT
GGTTACATGTAAGGAGAAGAACCAACAAATGAATAATAAATCCTACTCCC
CTACTCCAATAATAATATATAAAACTCATTGCATATTCAAAAAAAAAAAA
CTAATAATCCTAAATTCTAAAATAATAAATCCTATTTCCCCCCTTTTTCG
TTTTTGGCGTTTGGCCCCAAAGTAGGCATCAATTATCAACGGGTGAGCTT
TTCCATCACCACAGACTTTAAGGTGGCATGGCCCAGGCATCGAAGAATTA
TCTATTACAACAACGGTAGAGGGTCCACACTCGAAACGACAAGGCAACCT
CCGTTTCCAGGCCAAAAAGTTGTATGGGTAATGTATTTTTCTGTATGATT
GTATGCCCGTGGGCCTATCCTAAGTTAGTGAATATCGAAGAAATTAAAAG
AGTTGCCATGCCCTCCAGACGGCGAATGTGATGCTGACTATACCCGCAAT
GCCATTGCCATGCGATCCCAGCACGTAGGTATACGTGGAAGGTGACGCGC
TGCTTTGGTCCAACGCACCTTCGTACACCATTGTGCTATCGATGGTCCCT
GTGTTGGGCGCATTGCTTCCACTGTTTCCACCTTGTGAGGATTTCTGGCT
GGTGTTGGGGGAAGGACAGAAGGTTATGGTGTAGTCGGGCCCCGAACCGC
ATGTAAAGGTGCTGGATTTGTCATCGTACGCATAGCTGTAAGCGTGAGGA
CACGCGCTTTTGAAGATCTGAGAATAAGTAGATGGCTTGCATGTATCGGG
AGTACTAAACGCGCCATTACAACAGTACTGCGGCTGCCTAAAGG
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