CB290389

Overview
NameCB290389
Unique NameCB290389
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB290389 vs. ExPASy Swiss-Prot
Match: KIN10_ARATH (SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana GN=KIN10 PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 9.277e-33
Identity = 72/170 (42.35%), Postives = 105/170 (61.76%), Query Frame = 1 
Query:  268 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 774
            Y++GR LG G+F +V   +  +TG  VAIK++N+ ++K   M E+++REI ++RL  HP+++ L EV+ T   I++ MEYV  GELF   V +GRL+ED AR +FQQ+IS V++CH   V HR                I+DFGLS +   +R+   L T CG+P Y AP
Sbjct:   42 YKLGRTLGIGSFGRVKIAEHALTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYLVMEYVNSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIADFGLSNI---MRDGHFLKTSCGSPNYAAP 208
[Close]
BLAST of CB290389 vs. ExPASy Swiss-Prot
Match: AAPK1_RAT (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Rattus norvegicus GN=Prkaa1 PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 9.277e-33
Identity = 77/196 (39.29%), Postives = 118/196 (60.20%), Query Frame = 1 
Query:  202 RQNSNFLRERHMEEERH---VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG-LLHTQCGTPAYVAP 774
            R+ S++ +    E+++H   V  G Y +G  LG GTF KV  GK  +TG  VA+K++N+ +++   ++ +I+REI  ++L RHP++++L +V++T   IF+ MEYV GGELF  + + GRL E  +R+ FQQ++S VD+CH   V HR                I+DFGLS     + +DG  L T CG+P Y AP
Sbjct:    2 RRLSSWRKMATAEKQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAP 193
[Close]
BLAST of CB290389 vs. ExPASy Swiss-Prot
Match: AAPK1_MOUSE (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Mus musculus GN=Prkaa1 PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 9.277e-33
Identity = 77/196 (39.29%), Postives = 118/196 (60.20%), Query Frame = 1 
Query:  202 RQNSNFLRERHMEEERH---VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG-LLHTQCGTPAYVAP 774
            R+ S++ +    E+++H   V  G Y +G  LG GTF KV  GK  +TG  VA+K++N+ +++   ++ +I+REI  ++L RHP++++L +V++T   IF+ MEYV GGELF  + + GRL E  +R+ FQQ++S VD+CH   V HR                I+DFGLS     + +DG  L T CG+P Y AP
Sbjct:    2 RRLSSWRKMATAEKQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAP 193
[Close]
BLAST of CB290389 vs. ExPASy Swiss-Prot
Match: AAPK1_HUMAN (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Homo sapiens GN=PRKAA1 PE=1 SV=4)

HSP 1 Score: 140.584 bits (353), Expect = 9.277e-33
Identity = 77/196 (39.29%), Postives = 118/196 (60.20%), Query Frame = 1 
Query:  202 RQNSNFLRERHMEEERH---VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG-LLHTQCGTPAYVAP 774
            R+ S++ +    E+++H   V  G Y +G  LG GTF KV  GK  +TG  VA+K++N+ +++   ++ +I+REI  ++L RHP++++L +V++T   IF+ MEYV GGELF  + + GRL E  +R+ FQQ++S VD+CH   V HR                I+DFGLS     + +DG  L T CG+P Y AP
Sbjct:    2 RRLSSWRKMATAEKQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAP 193
[Close]
BLAST of CB290389 vs. ExPASy Swiss-Prot
Match: AAPK2_RAT (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Rattus norvegicus GN=Prkaa2 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.067e-32
Identity = 75/184 (40.76%), Postives = 112/184 (60.87%), Query Frame = 1 
Query:  238 EEERH---VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG-LLHTQCGTPAYVAP 774
            E+++H   V  G Y +G  LG GTF KV  G+  +TG  VA+K++N+ +++   ++ +IKREI  ++L RHP++++L +V++T    F+ MEYV GGELF  + + GR+ E  AR+ FQQ++SAVD+CH   V HR                I+DFGLS     + +DG  L T CG+P Y AP
Sbjct:    3 EKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEVEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAP 182
[Close]
BLAST of CB290389 vs. ExPASy Swiss-Prot
Match: AAPK2_PONAB (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Pongo abelii GN=PRKAA2 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.067e-32
Identity = 75/184 (40.76%), Postives = 112/184 (60.87%), Query Frame = 1 
Query:  238 EEERH---VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG-LLHTQCGTPAYVAP 774
            E+++H   V  G Y +G  LG GTF KV  G+  +TG  VA+K++N+ +++   ++ +IKREI  ++L RHP++++L +V++T    F+ MEYV GGELF  + + GR+ E  AR+ FQQ++SAVD+CH   V HR                I+DFGLS     + +DG  L T CG+P Y AP
Sbjct:    3 EKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NIMSDGEFLRTSCGSPNYAAP 182
[Close]
BLAST of CB290389 vs. ExPASy Swiss-Prot
Match: AAPK2_PIG (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Sus scrofa GN=PRKAA2 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.067e-32
Identity = 75/184 (40.76%), Postives = 112/184 (60.87%), Query Frame = 1 
Query:  238 EEERH---VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG-LLHTQCGTPAYVAP 774
            E+++H   V  G Y +G  LG GTF KV  G+  +TG  VA+K++N+ +++   ++ +IKREI  ++L RHP++++L +V++T    F+ MEYV GGELF  + + GR+ E  AR+ FQQ++SAVD+CH   V HR                I+DFGLS     + +DG  L T CG+P Y AP
Sbjct:    3 EKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAP 182
[Close]
BLAST of CB290389 vs. ExPASy Swiss-Prot
Match: AAPK2_MOUSE (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Mus musculus GN=Prkaa2 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.067e-32
Identity = 75/184 (40.76%), Postives = 112/184 (60.87%), Query Frame = 1 
Query:  238 EEERH---VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG-LLHTQCGTPAYVAP 774
            E+++H   V  G Y +G  LG GTF KV  G+  +TG  VA+K++N+ +++   ++ +IKREI  ++L RHP++++L +V++T    F+ MEYV GGELF  + + GR+ E  AR+ FQQ++SAVD+CH   V HR                I+DFGLS     + +DG  L T CG+P Y AP
Sbjct:    3 EKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEVEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAP 182
[Close]
BLAST of CB290389 vs. ExPASy Swiss-Prot
Match: AAPK2_HUMAN (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Homo sapiens GN=PRKAA2 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.067e-32
Identity = 75/184 (40.76%), Postives = 112/184 (60.87%), Query Frame = 1 
Query:  238 EEERH---VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG-LLHTQCGTPAYVAP 774
            E+++H   V  G Y +G  LG GTF KV  G+  +TG  VA+K++N+ +++   ++ +IKREI  ++L RHP++++L +V++T    F+ MEYV GGELF  + + GR+ E  AR+ FQQ++SAVD+CH   V HR                I+DFGLS     + +DG  L T CG+P Y AP
Sbjct:    3 EKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAP 182
[Close]
BLAST of CB290389 vs. ExPASy Swiss-Prot
Match: AAPK1_PONAB (5'-AMP-activated protein kinase catalytic subunit alpha-1 (Fragment) OS=Pongo abelii GN=PRKAA1 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.067e-32
Identity = 75/184 (40.76%), Postives = 112/184 (60.87%), Query Frame = 1 
Query:  238 EEERH---VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG-LLHTQCGTPAYVAP 774
            E+++H   V  G Y +G  LG GTF KV  GK  +TG  VA+K++N+ +++   ++ +I+REI  ++L RHP++++L +V++T   IF+ MEYV GGELF  + + GRL E  +R+ FQQ++S VD+CH   V HR                I+DFGLS     + +DG  L T CG+P Y AP
Sbjct:    9 EKQKHDGRVRIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAP 188
The following BLAST results are available for this feature:
BLAST of CB290389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KIN10_ARATH9.277e-3342.35SNF1-related protein kinase catalytic subunit alph... [more]
AAPK1_RAT9.277e-3339.295'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_MOUSE9.277e-3339.295'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_HUMAN9.277e-3339.295'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_RAT2.067e-3240.765'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_PONAB2.067e-3240.765'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_PIG2.067e-3240.765'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_MOUSE2.067e-3240.765'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_HUMAN2.067e-3240.765'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_PONAB2.067e-3240.765'-AMP-activated protein kinase catalytic subunit ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01bb08_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01bb08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290389 ID=CB290389; Name=CB290389; organism=Citrus sinensis; type=EST; length=776bp
CGTAAACACAAACCAGACACAAAACCAAGTGCCCAAAAATCAACACCCCA
TTGAAAAGGAAGAGAAAAGCTTTGATCAAACACCCACTTCATGGAATCAA
TTCAAATCTGCATAACCGCAGTCCTTTCTTGGATCCCCTTATCGCAGTAT
TATTATCATAATTGATAATTCATAGGGATACAATTATAGTCCTGATTCAA
AAGACAAAATTCTAATTTCTTGAGAGAGAGACACATGGAAGAGGAGAGGC
ATGTTCTTTTCGGAAAGTACGAGATGGGGAGGTTATTAGGCAAGGGCACG
TTCGCGAAAGTGTATTACGGGAAGCAGCTGATGACAGGGGAGAGCGTGGC
GATCAAAGTGATCAACAAGGATCAATTGAAGAAGGAATTCATGATGGAGC
AGATCAAGCGAGAAATCTCTGTCATGAGATTAGTCCGCCACCCGAATGTC
GTCGAGTTGAGAGAAGTTATGGCCACCAAGAAGAAGATCTTTGTTGCCAT
GGAGTACGTCAAAGGTGGCGAGCTCTTCGCCAAAGTCGCCAGAGGCAGGC
TAAGGGAGGATCTCGCGAGGAAGTATTTCCAACAACTCATCAGTGCCGTC
GATTTCTGCCACAGCAGGGGAGTCTCTCACCGTGACCTGAAGCCGGAGAA
TCTGTTGTTGGACGAGAATGAGGATCTAAAGATCTCTGACTTTGGCCTCT
CTGCTCTCCCCGAGCAGCTGCGAAACGACGGCCTTCTGCACACCCAGTGT
GGGACTCCTGCTTACGTGGCGCCGGA
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