CB290397

Overview
NameCB290397
Unique NameCB290397
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290397 vs. ExPASy Swiss-Prot
Match: LGMN_RAT (Legumain OS=Rattus norvegicus GN=Lgmn PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 5.471e-59
Identity = 107/199 (53.77%), Postives = 145/199 (72.86%), Query Frame = 2
Query:  158 GGGGAKVN-DDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATT 748
            G G   +  DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE IIV MYDDIA NEENP PGV+IN P+G DVYKGVPKDYTGEDVT ENF AV+ G++ A+ G GSGKV+ SGP DH+F++++DHG  G+L  P +  ++  +L   ++  +    Y+ +VFY+EACESGS+    LP+ +++YATT
Sbjct:   14 GAGAVHIGVDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIIVMMYDDIANNEENPTPGVVINRPNGTDVYKGVPKDYTGEDVTPENFLAVLRGDEEAVKGKGSGKVLKSGPRDHVFVYFTDHGATGILVFP-NEDLHVKDLNKTIRYMYEHKMYQKMVFYIEACESGSMMNH-LPDDIDVYATT 210          
BLAST of CB290397 vs. ExPASy Swiss-Prot
Match: LGMN_HUMAN (Legumain OS=Homo sapiens GN=LGMN PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 9.332e-59
Identity = 104/197 (52.79%), Postives = 145/197 (73.60%), Query Frame = 2
Query:  161 GGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATT 748
            G GA   DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE I+V MYDDIA++E+NP PG++IN P+G DVY+GVPKDYTGEDVT +NF AV+ G+  A+ G GSGKV+ SGP DH+FI+++DHG  G+L  P +  ++  +L + +   +    Y+ +VFY+EACESGS+    LP+ +N+YATT
Sbjct:   14 GIGAVPIDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGPQDHVFIYFTDHGSTGILVFP-NEDLHVKDLNETIHYMYKHKMYRKMVFYIEACESGSMMNH-LPDNINVYATT 208          
BLAST of CB290397 vs. ExPASy Swiss-Prot
Match: LGMN_MACFA (Legumain OS=Macaca fascicularis GN=LGMN PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.592e-58
Identity = 103/197 (52.28%), Postives = 145/197 (73.60%), Query Frame = 2
Query:  161 GGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATT 748
            G GA   DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE I+V MYDDIA++E+NP PG++IN P+G DVY+GVPKDYTGEDVT +NF AV+ G+  A+ G GSGKV+ SGP DH+F++++DHG  G+L  P +  ++  +L + +   +    Y+ +VFY+EACESGS+    LP+ +N+YATT
Sbjct:   14 GIGAVPIDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGPQDHVFVYFTDHGSTGILVFP-NEDLHVKDLNETIYYMYKHKMYRKMVFYIEACESGSMMNH-LPDNINVYATT 208          
BLAST of CB290397 vs. ExPASy Swiss-Prot
Match: LGMN_PONAB (Legumain OS=Pongo abelii GN=LGMN PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.546e-58
Identity = 102/195 (52.31%), Postives = 144/195 (73.85%), Query Frame = 2
Query:  167 GAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATT 748
            GA   DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE I+V MYDDIA++E+NP PG++IN P+G DVY+GVPKDYTGEDVT +NF AV+ G+  A+ G GSGKV+ SGP DH+F++ +DHG  G+L  P +  ++ ++L + +   +    Y+ +VFY+EACESGS+    LP+ +N+YATT
Sbjct:   16 GAVPIDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGPQDHVFVYSTDHGSTGILVFP-NEDLHVEDLNETIHYMYKHKMYRKMVFYIEACESGSMMNH-LPDNINVYATT 208          
BLAST of CB290397 vs. ExPASy Swiss-Prot
Match: LGMN_MOUSE (Legumain OS=Mus musculus GN=Lgmn PE=1 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 7.900e-58
Identity = 108/199 (54.27%), Postives = 142/199 (71.36%), Query Frame = 2
Query:  158 GGGGAKVN-DDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATT 748
            G G   V  DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE IIV MYDDIA +EENP PGV+IN P+G DVYKGV KDYTGEDVT ENF AV+ G+  A+ G GSGKV+ SGP DH+FI+++DHG  G+L  P    ++  +L   ++  +    Y+ +VFY+EACESGS+    LP+ +N+YATT
Sbjct:   14 GAGAVPVGVDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIIVMMYDDIANSEENPTPGVVINRPNGTDVYKGVLKDYTGEDVTPENFLAVLRGDAEAVKGKGSGKVLKSGPRDHVFIYFTDHGATGILVFPNDD-LHVKDLNKTIRYMYEHKMYQKMVFYIEACESGSMMNH-LPDDINVYATT 210          
BLAST of CB290397 vs. ExPASy Swiss-Prot
Match: LGMN_BOVIN (Legumain OS=Bos taurus GN=LGMN PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.946e-56
Identity = 102/197 (51.78%), Postives = 144/197 (73.10%), Query Frame = 2
Query:  161 GGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATT 748
            G GA   +D +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE IIV MYDDIA +E+NP PG++IN P+G DVY+GV KDYTGEDVT +NF AV+ G+  A+ G GSGKV+ SGP DH+F++++DHG  G+L  P +  ++  +L + ++  +    Y+ +VFY+EACESGS+   L P+ +N+YATT
Sbjct:   14 GTGAVPLEDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIVHRNGIPDEQIIVMMYDDIANSEDNPTPGIVINRPNGSDVYQGVLKDYTGEDVTPKNFLAVLRGDAEAVKGVGSGKVLKSGPRDHVFVYFTDHGATGILVFP-NEDLHVKDLNETIRYMYEHKMYQKMVFYIEACESGSMMNHLPPD-INVYATT 208          
BLAST of CB290397 vs. ExPASy Swiss-Prot
Match: HGLB_SCHJA (Hemoglobinase OS=Schistosoma japonicum GN=HAEM PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.930e-49
Identity = 98/181 (54.14%), Postives = 121/181 (66.85%), Query Frame = 2
Query:  206 RWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATT 748
            +WAVL+AGSNGF NYRHQAD+CHAY +L   G+K E+II FMYDDIA N+ENP PG I N     D YKGV  DY G+ V  + F  V+ G+K A     GKV+ SG ND +FI+++DHG PG+L  P    ++A   I+ LK       Y  LV Y+EACESGS+F GLLP  +NIYATT
Sbjct:   31 KWAVLVAGSNGFENYRHQADVCHAYHVLLSKGVKPEHIITFMYDDIAHNKENPFPGKIFNDYRHKDYYKGVVIDYKGKKVNPKTFLQVLKGDKRA----GGKVLKSGKNDDVFIYFTDHGAPGILAFPDDD-LHAKPFINTLKYLRQHRRYSKLVIYVEACESGSMFAGLLPTDINIYATT 206          
BLAST of CB290397 vs. ExPASy Swiss-Prot
Match: HGLB_SCHMA (Hemoglobinase OS=Schistosoma mansoni PE=1 SV=3)

HSP 1 Score: 192.971 bits (489), Expect = 1.493e-48
Identity = 95/192 (49.48%), Postives = 130/192 (67.71%), Query Frame = 2
Query:  173 KVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATT 748
            +V+D+  S   +WAVL+AGSNG+ NYRHQAD+CHAY +LR  G+K E+II  MYDDIA+N  NP PG + N  +  D Y+GV  DY G++V  + F  V+ G+K+A     GKV+ SG ND +FI+++DHG PG++  P    +YA E +  LK  H+   Y  LV Y+EA ESGS+F+ +LP  L+IYATT
Sbjct:   26 EVSDETVSDNNKWAVLVAGSNGYPNYRHQADVCHAYHVLRSKGIKPEHIITMMYDDIAYNLMNPFPGKLFNDYNHKDWYEGVVIDYRGKNVNSKTFLKVLKGDKSA----GGKVLKSGKNDDVFIYFTDHGAPGLIAFPDDE-LYAKEFMSTLKYLHSHKRYSKLVIYIEANESGSMFQQILPSNLSIYATT 212          
BLAST of CB290397 vs. ExPASy Swiss-Prot
Match: GPI8_DROME (Putative GPI-anchor transamidase OS=Drosophila melanogaster GN=CG4406 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.837e-23
Identity = 62/174 (35.63%), Postives = 97/174 (55.75%), Query Frame = 2
Query:  209 WAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHP------HGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTGGSGKVV-DSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFE 709
            WAVL+  S  ++NYRH A++   Y+ +++ G+ D  II+ + DD+A N  NPRPG + N+       +GDD    V  DY G +VTVENF  ++ G     T  S K++ D+G N  + I+ + HGG G L    S  I + EL D +++      Y  L F ++ C++ S++E
Sbjct:   47 WAVLVDASRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMIADDMACNARNPRPGQVYNNANQHINVYGDD----VEVDYRGYEVTVENFVRLLTGRTQNGTARSKKLLSDAGSN--VLIYLTGHGGDGFLKFQDSEEITSQELADGIQQMWEKKRYNELFFMVDTCQAASLYE 214          
BLAST of CB290397 vs. ExPASy Swiss-Prot
Match: GPI8_MOUSE (GPI-anchor transamidase OS=Mus musculus GN=Pigk PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.556e-21
Identity = 70/224 (31.25%), Postives = 110/224 (49.11%), Query Frame = 2
Query:   56 ITLLVALAGIADGSRDIAGPILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHP------HGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFE 709
            +  L ALA ++ GS   AG I     +A +FF +G                WAVL+  S  ++NYRH A+    Y+ +++ G+ D +I++ + DD+A N  NP+P  + +H       +GDD    V  DY   +VTVENF  V+ G     T  S +++ S    +I I+ + HGG G L    S  I   EL D  ++      Y  L+F ++ C+  S++E
Sbjct:   11 VATLAALALLSLGS-SAAGHI---EDQAEQFFRSGHTN------------NWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNARNPKPATVFSHKNMELNVYGDD----VEVDYRSYEVTVENFLRVLTGRVPPSTPRSKRLL-SDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNELLFIIDTCQGASMYE 213          
The following BLAST results are available for this feature:
BLAST of CB290397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
LGMN_RAT5.471e-5953.77Legumain OS=Rattus norvegicus GN=Lgmn PE=2 SV=1[more]
LGMN_HUMAN9.332e-5952.79Legumain OS=Homo sapiens GN=LGMN PE=1 SV=1[more]
LGMN_MACFA1.592e-5852.28Legumain OS=Macaca fascicularis GN=LGMN PE=2 SV=1[more]
LGMN_PONAB3.546e-5852.31Legumain OS=Pongo abelii GN=LGMN PE=2 SV=1[more]
LGMN_MOUSE7.900e-5854.27Legumain OS=Mus musculus GN=Lgmn PE=1 SV=1[more]
LGMN_BOVIN1.946e-5651.78Legumain OS=Bos taurus GN=LGMN PE=1 SV=1[more]
HGLB_SCHJA3.930e-4954.14Hemoglobinase OS=Schistosoma japonicum GN=HAEM PE=... [more]
HGLB_SCHMA1.493e-4849.48Hemoglobinase OS=Schistosoma mansoni PE=1 SV=3[more]
GPI8_DROME4.837e-2335.63Putative GPI-anchor transamidase OS=Drosophila mel... [more]
GPI8_MOUSE1.556e-2131.25GPI-anchor transamidase OS=Mus musculus GN=Pigk PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01bc02_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01bc02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290397 ID=CB290397; Name=CB290397; organism=Citrus sinensis; type=EST; length=749bp
GTCCGTAAAGGAACCCCCTTNAAAAACCATGACGCGCCTTCCTTCAAGAG
TGCTAATCACGCTCCTAGTCGCTCTTGCAGGAATCGCCGATGGAAGCAGA
GACATAGCAGGTCCCATTCTGAAGCTACCATCGGAAGCCTATAGGTTCTT
CCATAATGGTGGGGGAGGGGCAAAGGTCAACGATGATGATGATTCTGTCG
GCACGAGATGGGCCGTCCTGCTTGCCGGATCTAATGGCTTCTGGAATTAC
AGGCATCAGGCTGATATTTGTCATGCTTATCAACTCTTGAGGAAAGGTGG
GCTGAAGGATGAAAATATTATTGTTTTCATGTATGATGACATCGCTTTCA
ATGAAGAGAACCCAAGGCCTGGAGTCATCATTAACCACCCCCATGGCGAT
GATGTTTACAAAGGAGTTCCAAAGGATTACACGGGGGAAGATGTTACTGT
TGAAAACTTTTTTGCTGTTGTCCTGGGAAATAAAACAGCTCTTACAGGGG
GCAGTGGGAAGGTTGTGGATAGCGGCCCCAATGATCATATTTTCATATTC
TACTCAGATCATGGTGGCCCTGGGGTGCTAGGGATGCCCACCAGTCGATA
CATATATGCTGATGAACTGATCGATGTCTTAAAAAAGAAGCATGCTTCTG
GGAACTACAAAAGCTTGGTATTTTATCTCGAAGCCTGTGAATCTGGAAGT
ATCTTTGAGGGTCTTCTTCCTGAGGGCTTAAATATCTATGCAACCACAG
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