CB290400

Overview
NameCB290400
Unique NameCB290400
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290400 vs. ExPASy Swiss-Prot
Match: ZDHC5_MOUSE (Probable palmitoyltransferase ZDHHC5 OS=Mus musculus GN=Zdhhc5 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.355e-11
Identity = 30/76 (39.47%), Postives = 42/76 (55.26%), Query Frame = -1
Query:  495 GTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLGNHCRFWWYICEETALCLWT---GVLYVAY 713
            G  +R   C+ C   +PPR  HC  CD CV +FDHHC W+  C+G  N+  F+ ++   TA  +     G+LYV Y
Sbjct:   98 GIQVRMKWCATCRFYRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFFLFLLSLTAHIMGVFGFGLLYVLY 173          
BLAST of CB290400 vs. ExPASy Swiss-Prot
Match: ZDHC5_HUMAN (Probable palmitoyltransferase ZDHHC5 OS=Homo sapiens GN=ZDHHC5 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.355e-11
Identity = 30/76 (39.47%), Postives = 42/76 (55.26%), Query Frame = -1
Query:  495 GTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLGNHCRFWWYICEETALCLWT---GVLYVAY 713
            G  +R   C+ C   +PPR  HC  CD CV +FDHHC W+  C+G  N+  F+ ++   TA  +     G+LYV Y
Sbjct:   98 GIQVRMKWCATCRFYRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFFLFLLSLTAHIMGVFGFGLLYVLY 173          
BLAST of CB290400 vs. ExPASy Swiss-Prot
Match: ZDHC5_CANFA (Probable palmitoyltransferase ZDHHC5 OS=Canis familiaris GN=ZDHHC5 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.355e-11
Identity = 30/76 (39.47%), Postives = 42/76 (55.26%), Query Frame = -1
Query:  495 GTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLGNHCRFWWYICEETALCLWT---GVLYVAY 713
            G  +R   C+ C   +PPR  HC  CD CV +FDHHC W+  C+G  N+  F+ ++   TA  +     G+LYV Y
Sbjct:   98 GIQVRMKWCATCRFYRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFFLFLLSLTAHIMGVFGFGLLYVLY 173          
BLAST of CB290400 vs. ExPASy Swiss-Prot
Match: ZDHC1_DICDI (Putative ZDHHC-type palmitoyltransferase 1 OS=Dictyostelium discoideum GN=DDB_G0276997 PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.355e-11
Identity = 27/66 (40.91%), Postives = 40/66 (60.61%), Query Frame = -1
Query:  492 CSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLGNHCRFWWYICEETALCLWTGVLYVAYL 689
            C  C + +PPRA HC  C+ CV +FDHHC W+G C+G  N+  F +++     LC+W     VA++
Sbjct:  117 CETCCLYRPPRANHCGICNNCVERFDHHCPWVGNCIGRRNYQTFLYFLYSLGFLCIWIMGFCVAHI 182          
BLAST of CB290400 vs. ExPASy Swiss-Prot
Match: ZDHC9_PONAB (Palmitoyltransferase ZDHHC9 OS=Pongo abelii GN=ZDHHC9 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.769e-11
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = -1
Query:  492 CSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLGNHCRFWWYICEETALCLWTGVLYVAYL 689
            C  C + +PPRA HC  CD CV +FDHHC W+G CVG  N+  F+ +I   + L ++     + Y+
Sbjct:  141 CYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRYFYLFILSLSLLTIYVFAFNIVYV 206          
BLAST of CB290400 vs. ExPASy Swiss-Prot
Match: ZDHC9_MOUSE (Palmitoyltransferase ZDHHC9 OS=Mus musculus GN=Zdhhc9 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.769e-11
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = -1
Query:  492 CSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLGNHCRFWWYICEETALCLWTGVLYVAYL 689
            C  C + +PPRA HC  CD CV +FDHHC W+G CVG  N+  F+ +I   + L ++     + Y+
Sbjct:  141 CYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRYFYLFILSLSLLTIYVFAFNIVYV 206          
BLAST of CB290400 vs. ExPASy Swiss-Prot
Match: ZDHC9_HUMAN (Palmitoyltransferase ZDHHC9 OS=Homo sapiens GN=ZDHHC9 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.769e-11
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = -1
Query:  492 CSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLGNHCRFWWYICEETALCLWTGVLYVAYL 689
            C  C + +PPRA HC  CD CV +FDHHC W+G CVG  N+  F+ +I   + L ++     + Y+
Sbjct:  141 CYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRYFYLFILSLSLLTIYVFAFNIVYV 206          
BLAST of CB290400 vs. ExPASy Swiss-Prot
Match: ZDHC9_BOVIN (Palmitoyltransferase ZDHHC9 OS=Bos taurus GN=ZDHHC9 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.769e-11
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = -1
Query:  492 CSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLGNHCRFWWYICEETALCLWTGVLYVAYL 689
            C  C + +PPRA HC  CD CV +FDHHC W+G CVG  N+  F+ +I   + L ++     + Y+
Sbjct:  141 CYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRYFYLFILSLSLLTIYVFAFNIVYV 206          
BLAST of CB290400 vs. ExPASy Swiss-Prot
Match: ZDH14_MOUSE (Probable palmitoyltransferase ZDHHC14 OS=Mus musculus GN=Zdhhc14 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.769e-11
Identity = 28/74 (37.84%), Postives = 43/74 (58.11%), Query Frame = -1
Query:  492 GTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLGNHCRFWWYICEETALCLWTGVLYVAYL 713
            G +++   C  C + +PPRA HC  CD CV QFDHHC W+G CVG  N+  F+ +I   + L ++     + ++
Sbjct:  159 GQTVKLKYCFTCKIFRPPRASHCSLCDNCVEQFDHHCPWVGNCVGKRNYRFFYMFILSLSFLTVFIFAFVITHV 232          
BLAST of CB290400 vs. ExPASy Swiss-Prot
Match: SWF1_YEAST (Palmitoyltransferase SWF1 OS=Saccharomyces cerevisiae GN=SWF1 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.769e-11
Identity = 23/51 (45.10%), Postives = 37/51 (72.55%), Query Frame = -1
Query:  546 SLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLGNHCRFWWYI 698
            ++ CS C + +P R+KHC  C+RCVL  DHHC+W+  C+G GN+ +F+ ++
Sbjct:  133 AIKCSTCRIVKPARSKHCSICNRCVLVADHHCIWINNCIGKGNYLQFYLFL 183          
The following BLAST results are available for this feature:
BLAST of CB290400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
ZDHC5_MOUSE1.355e-1139.47Probable palmitoyltransferase ZDHHC5 OS=Mus muscul... [more]
ZDHC5_HUMAN1.355e-1139.47Probable palmitoyltransferase ZDHHC5 OS=Homo sapie... [more]
ZDHC5_CANFA1.355e-1139.47Probable palmitoyltransferase ZDHHC5 OS=Canis fami... [more]
ZDHC1_DICDI1.355e-1140.91Putative ZDHHC-type palmitoyltransferase 1 OS=Dict... [more]
ZDHC9_PONAB1.769e-1140.91Palmitoyltransferase ZDHHC9 OS=Pongo abelii GN=ZDH... [more]
ZDHC9_MOUSE1.769e-1140.91Palmitoyltransferase ZDHHC9 OS=Mus musculus GN=Zdh... [more]
ZDHC9_HUMAN1.769e-1140.91Palmitoyltransferase ZDHHC9 OS=Homo sapiens GN=ZDH... [more]
ZDHC9_BOVIN1.769e-1140.91Palmitoyltransferase ZDHHC9 OS=Bos taurus GN=ZDHHC... [more]
ZDH14_MOUSE1.769e-1137.84Probable palmitoyltransferase ZDHHC14 OS=Mus muscu... [more]
SWF1_YEAST1.769e-1145.10Palmitoyltransferase SWF1 OS=Saccharomyces cerevis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01bc04_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01bc04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290400 ID=CB290400; Name=CB290400; organism=Citrus sinensis; type=EST; length=845bp
TTTTTTTTTTTTTCACAGAACCTTTTGTGTTGCCATAACTTTTAACAAGA
CCAAATGAATGTACAACCATGGGTTTCAACATAACTCACTGTAAAATTTA
GGGGAAAGCACTAAAGTCAATGATACAATGCTCCCTGATGTCAACAGCAG
CAACGACAGGTTAAAAAATCTAAGCATGTGTAAGGTCTAGACTTTTCTTC
AATTTCCTGTGCAGTGGGCAACCTTTCCAAATTGTATACGCTAGCTTTAA
CACAACATAATTTGTAAAGGTTTCTGCAAACTCCATCACTAAAGGGATAC
ACTCGTTCAGGAATCCCCCTCAAATACGGGATGCGTCTACGTCTTACGAG
CTCATAGGTAGTCTGATTTGTCAGGATAAGATAACTATGAAAAAGGAGGA
GGAGGAGCAAAAATATCAAGAAAATTGCCAAAATAATCAGTAGCACAATC
ATGATTACATCCTTCCACCAAGCCAGTGCTATATTAGCCTTCAAGTATGC
AACATACAAGACGCCAGTCCAAAGGCATAGTGCTGTTTCTTCACAAATGT
ACCACCAAAATCGACAATGATTACCCAGGCCAACACATGTTCCCAGCCAA
ACACAATGATGATCAAACTGAAGAACACATCTGTCACAATCATGGCAATG
CTTTGCCCGTGGAGGCTGTTCGACATTACAGTACGAGCAAGTTAAACTTC
TAATGGATGTTCCAGGAGGATACAGGTCCAGGACTAGCTTTGTCCAAGAT
GTTGCATTACTTCCTGAAAAACTTCTTCCTGGCCGACTTCCCTCCATGGT
AATGACCATGTTTCCATTTTTGCTTGAACCCGGCTGTTTTGAGGT
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