CB290400

Overview
NameCB290400
Unique NameCB290400
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290400 vs. ExPASy Swiss-Prot
Match: ERFB_ASHGO (Palmitoyltransferase ERF2 OS=Ashbya gossypii GN=ERF2 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.769e-11
Identity = 26/62 (41.94%), Postives = 35/62 (56.45%), Query Frame = -1
Query:  519 IRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLGNHCRFWWYICEETALCLW 704
            +R   C+ C + +PPRA HC  CD C+L FDHHC WL  C+G  NH  F  ++       +W
Sbjct:  182 VRLKYCTTCRIWRPPRASHCAVCDSCILSFDHHCDWLNNCIGQRNHRYFLAFLFSSVLSSIW 243          
BLAST of CB290400 vs. ExPASy Swiss-Prot
Match: ZDHC6_ARATH (Probable S-acyltransferase At3g09320 OS=Arabidopsis thaliana GN=At3g09320 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.311e-11
Identity = 28/66 (42.42%), Postives = 40/66 (60.61%), Query Frame = -1
Query:  492 CSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLGNHCRFWWYICEETALCLWTGVLYVAYL 689
            C  C+  +PPRA HC  C RCVL+ DHHC+W+  CVG  N+  F+ ++      C+++ VL V  L
Sbjct:   99 CQKCSHFKPPRAHHCRVCKRCVLRMDHHCIWINNCVGHTNYKVFFVFVVYAVTACVYSLVLLVGSL 164          
BLAST of CB290400 vs. ExPASy Swiss-Prot
Match: PFA3_NEUCR (Palmitoyltransferase PFA3 OS=Neurospora crassa GN=pfa-3 PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.311e-11
Identity = 27/55 (49.09%), Postives = 32/55 (58.18%), Query Frame = -1
Query:  525 CSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLGNHCRFWWYICEETALC 689
            C  C   +P RA HC  C RCVL+ DHHC WL TCVGL NH  F  ++   +  C
Sbjct:  110 CKKCQARKPDRAHHCSTCRRCVLKMDHHCPWLATCVGLRNHKAFLLFLIYTSVFC 164          
BLAST of CB290400 vs. ExPASy Swiss-Prot
Match: AKR1_EMENI (Palmitoyltransferase akr1 OS=Emericella nidulans GN=akr1 PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.311e-11
Identity = 30/69 (43.48%), Postives = 40/69 (57.97%), Query Frame = -1
Query:  483 CSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLGNHCRFWWYICEETALCLWTGVLYVAYLKAN 689
            C YC + +P R+KHC  C RCV + DHHC W+  CVG+ N  +F  YI     LCL  G++   +L  N
Sbjct:  458 CVYCMIRRPLRSKHCRRCSRCVAKHDHHCPWIDNCVGVNNLRQFVLYI-----LCLEIGIILFLHLTFN 521          
BLAST of CB290400 vs. ExPASy Swiss-Prot
Match: ZDH13_MOUSE (Probable palmitoyltransferase ZDHHC13 OS=Mus musculus GN=Zdhhc13 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.018e-11
Identity = 24/66 (36.36%), Postives = 42/66 (63.64%), Query Frame = -1
Query:  492 CSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLGNHCRFWWYICEETALCLWTGVLYVAYL 689
            C+ C + +P R+ HCH C+ CV +FD HC W G C+G GNH  + +++   + +C W  ++Y +++
Sbjct:  428 CTSCLIRKPLRSLHCHVCNSCVARFDQHCFWTGRCIGFGNHHHYIFFLLSLSMVCDW--IIYGSFV 491          
BLAST of CB290400 vs. ExPASy Swiss-Prot
Match: ERFB_ASPFU (Palmitoyltransferase erf2 OS=Aspergillus fumigatus GN=erf2 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.941e-11
Identity = 27/57 (47.37%), Postives = 34/57 (59.65%), Query Frame = -1
Query:  519 CSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLGNHCRFWWYICEETALCLW 689
            C  CN+ +PPR  HC  CD CV   DHHCVWL  CVG  N+  F+ ++   T L L+
Sbjct:  407 CKTCNIWRPPRCYHCRVCDNCVETLDHHCVWLNNCVGRRNYRYFFAFVSSATLLALF 463          
BLAST of CB290400 vs. ExPASy Swiss-Prot
Match: ZDHC4_DICDI (Putative ZDHHC-type palmitoyltransferase 4 OS=Dictyostelium discoideum GN=DDB_G0274251 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.148e-11
Identity = 28/63 (44.44%), Postives = 37/63 (58.73%), Query Frame = -1
Query:  501 CSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLGNHCRFWWYICEETALCLWTGVLYV 689
            C  C+  +PPR  HC  CD+CVL+ DHHC W+G CVG  N+  F+ ++       LW  V YV
Sbjct:  129 CKKCSKAKPPRCHHCSVCDKCVLKMDHHCPWIGGCVGFYNYRYFFLFLS-----YLWVSVCYV 186          
BLAST of CB290400 vs. ExPASy Swiss-Prot
Match: ZDH20_MOUSE (Probable palmitoyltransferase ZDHHC20 OS=Mus musculus GN=Zdhhc20 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.148e-11
Identity = 29/79 (36.71%), Postives = 39/79 (49.37%), Query Frame = -1
Query:  495 LDLYPPGTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLGNHCRFWWYICEETALCLWTGVLYVAY 731
            L +Y    S     C  C + +P RA HC  CDRCVL+ DHHC W+  CVG  N+  F  ++      CL+     + Y
Sbjct:  114 LPIYTTSASKAIRYCEKCQLIKPDRAHHCSACDRCVLKMDHHCPWVNNCVGFTNYKFFMLFLLYSLLYCLFVAATVLEY 192          
BLAST of CB290400 vs. ExPASy Swiss-Prot
Match: ZDH14_HUMAN (Probable palmitoyltransferase ZDHHC14 OS=Homo sapiens GN=ZDHHC14 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.148e-11
Identity = 27/74 (36.49%), Postives = 43/74 (58.11%), Query Frame = -1
Query:  492 GTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLGNHCRFWWYICEETALCLWTGVLYVAYL 713
            G +++   C  C + +PPRA HC  CD CV +FDHHC W+G CVG  N+  F+ +I   + L ++     + ++
Sbjct:  159 GQTVKLKYCFTCKIFRPPRASHCSLCDNCVERFDHHCPWVGNCVGKRNYRFFYMFILSLSFLTVFIFAFVITHV 232          
BLAST of CB290400 vs. ExPASy Swiss-Prot
Match: ERFB_GIBZE (Palmitoyltransferase ERF2 OS=Gibberella zeae GN=ERF2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.148e-11
Identity = 26/57 (45.61%), Postives = 34/57 (59.65%), Query Frame = -1
Query:  519 CSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLGNHCRFWWYICEETALCLW 689
            C  CN+ +PPRA HC  CD C+   DHHCVWL  CVG  N+  F+ ++   T L  +
Sbjct:  470 CRTCNIWRPPRAHHCRLCDNCIETHDHHCVWLNNCVGKRNYRYFFTFVTSATVLAAY 526          
The following BLAST results are available for this feature:
BLAST of CB290400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
ERFB_ASHGO1.769e-1141.94Palmitoyltransferase ERF2 OS=Ashbya gossypii GN=ER... [more]
ZDHC6_ARATH2.311e-1142.42Probable S-acyltransferase At3g09320 OS=Arabidopsi... [more]
PFA3_NEUCR2.311e-1149.09Palmitoyltransferase PFA3 OS=Neurospora crassa GN=... [more]
AKR1_EMENI2.311e-1143.48Palmitoyltransferase akr1 OS=Emericella nidulans G... [more]
ZDH13_MOUSE3.018e-1136.36Probable palmitoyltransferase ZDHHC13 OS=Mus muscu... [more]
ERFB_ASPFU3.941e-1147.37Palmitoyltransferase erf2 OS=Aspergillus fumigatus... [more]
ZDHC4_DICDI5.148e-1144.44Putative ZDHHC-type palmitoyltransferase 4 OS=Dict... [more]
ZDH20_MOUSE5.148e-1136.71Probable palmitoyltransferase ZDHHC20 OS=Mus muscu... [more]
ZDH14_HUMAN5.148e-1136.49Probable palmitoyltransferase ZDHHC14 OS=Homo sapi... [more]
ERFB_GIBZE5.148e-1145.61Palmitoyltransferase ERF2 OS=Gibberella zeae GN=ER... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01bc04_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01bc04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290400 ID=CB290400; Name=CB290400; organism=Citrus sinensis; type=EST; length=845bp
TTTTTTTTTTTTTCACAGAACCTTTTGTGTTGCCATAACTTTTAACAAGA
CCAAATGAATGTACAACCATGGGTTTCAACATAACTCACTGTAAAATTTA
GGGGAAAGCACTAAAGTCAATGATACAATGCTCCCTGATGTCAACAGCAG
CAACGACAGGTTAAAAAATCTAAGCATGTGTAAGGTCTAGACTTTTCTTC
AATTTCCTGTGCAGTGGGCAACCTTTCCAAATTGTATACGCTAGCTTTAA
CACAACATAATTTGTAAAGGTTTCTGCAAACTCCATCACTAAAGGGATAC
ACTCGTTCAGGAATCCCCCTCAAATACGGGATGCGTCTACGTCTTACGAG
CTCATAGGTAGTCTGATTTGTCAGGATAAGATAACTATGAAAAAGGAGGA
GGAGGAGCAAAAATATCAAGAAAATTGCCAAAATAATCAGTAGCACAATC
ATGATTACATCCTTCCACCAAGCCAGTGCTATATTAGCCTTCAAGTATGC
AACATACAAGACGCCAGTCCAAAGGCATAGTGCTGTTTCTTCACAAATGT
ACCACCAAAATCGACAATGATTACCCAGGCCAACACATGTTCCCAGCCAA
ACACAATGATGATCAAACTGAAGAACACATCTGTCACAATCATGGCAATG
CTTTGCCCGTGGAGGCTGTTCGACATTACAGTACGAGCAAGTTAAACTTC
TAATGGATGTTCCAGGAGGATACAGGTCCAGGACTAGCTTTGTCCAAGAT
GTTGCATTACTTCCTGAAAAACTTCTTCCTGGCCGACTTCCCTCCATGGT
AATGACCATGTTTCCATTTTTGCTTGAACCCGGCTGTTTTGAGGT
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