CB290404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: ASTC_ECOHS (Succinylornithine transaminase OS=Escherichia coli O9:H4 (strain HS) GN=astC PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 3 Query: 294 PLVIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF-DLPA 731 P + + EGS ++D GK+Y+D G+ ALG + P L A Q + F+H+ T +P L LAK+L++ A + VFF NSG+EAN+ +KL + + +K +A + ++HG TL S G PA Q F LPA Sbjct: 22 PFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASK--FWHTGNGYTNEPVLRLAKKLIDATFADR---VFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPA 163
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: ASTC_ECODH (Succinylornithine transaminase OS=Escherichia coli (strain K12 / DH10B) GN=astC PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 3 Query: 294 PLVIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF-DLPA 731 P + + EGS ++D GK+Y+D G+ ALG + P L A Q + F+H+ T +P L LAK+L++ A + VFF NSG+EAN+ +KL + + +K +A + ++HG TL S G PA Q F LPA Sbjct: 22 PFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASK--FWHTGNGYTNEPVLRLAKKLIDATFADR---VFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPA 163
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: ASTC_ECOBW (Succinylornithine transaminase OS=Escherichia coli (strain K12 / BW2952) GN=astC PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 3 Query: 294 PLVIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF-DLPA 731 P + + EGS ++D GK+Y+D G+ ALG + P L A Q + F+H+ T +P L LAK+L++ A + VFF NSG+EAN+ +KL + + +K +A + ++HG TL S G PA Q F LPA Sbjct: 22 PFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASK--FWHTGNGYTNEPVLRLAKKLIDATFADR---VFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPA 163
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: ASTC_ECO8A (Succinylornithine transaminase OS=Escherichia coli O8 (strain IAI1) GN=astC PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 3 Query: 294 PLVIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF-DLPA 731 P + + EGS ++D GK+Y+D G+ ALG + P L A Q + F+H+ T +P L LAK+L++ A + VFF NSG+EAN+ +KL + + +K +A + ++HG TL S G PA Q F LPA Sbjct: 22 PFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASK--FWHTGNGYTNEPVLRLAKKLIDATFADR---VFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPA 163
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: ASTC_ECO7I (Succinylornithine transaminase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=astC PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 3 Query: 294 PLVIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLH 746 P + + EGS ++D GK+Y+D G+ ALG + P L A Q + F+H+ T +P L LAK+L++ A + VFF NSG+EAN+ +KL + + +K +A + ++HG TL S G PA Q F P + H Sbjct: 22 PFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASK--FWHTGNGYTNEPVLRLAKKLIDATFADR---VFFCNSGAEANEAALKLARKFAHDRYGCHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPPDIRH 167
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: ASTC_ECO24 (Succinylornithine transaminase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=astC PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 3 Query: 294 PLVIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF-DLPA 731 P + + EGS ++D GK+Y+D G+ ALG + P L A Q + F+H+ T +P L LAK+L++ A + VFF NSG+EAN+ +KL + + +K +A + ++HG TL S G PA Q F LPA Sbjct: 22 PFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASK--FWHTGNGYTNEPVLRLAKKLIDATFADR---VFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPA 163
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: ARGD_SHIFL (Acetylornithine/succinyldiaminopimelate aminotransferase OS=Shigella flexneri GN=argD PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 53/146 (36.30%), Postives = 76/146 (52.05%), Query Frame = 3 Query: 309 KSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLH 746 K +GS ++D GK+Y+D G+ TALG P LV A Q TL +H T +P+L L ++L+E A+ +V F NSG+EAN+T KL +Y P K K IA ++HG +L S+ G P F ++H Sbjct: 30 KGQGSRIWDQQGKEYVDFAGGIAVTALGHCHPALVNALKTQGETL--WHISNVFTNEPALRLGRKLIE---ATFAERVVFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIH 170
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: ARGD_ECOLI (Acetylornithine/succinyldiaminopimelate aminotransferase OS=Escherichia coli (strain K12) GN=argD PE=1 SV=4) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 53/146 (36.30%), Postives = 76/146 (52.05%), Query Frame = 3 Query: 309 KSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLH 746 K +GS ++D GK+Y+D G+ TALG P LV A Q TL +H T +P+L L ++L+E A+ +V F NSG+EAN+T KL +Y P K K IA ++HG +L S+ G P F ++H Sbjct: 30 KGQGSRIWDQQGKEYVDFAGGIAVTALGHCHPALVNALKTQGETL--WHISNVFTNEPALRLGRKLIE---ATFAERVVFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIH 170
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: ARGD_ECOL6 (Acetylornithine/succinyldiaminopimelate aminotransferase OS=Escherichia coli O6 GN=argD PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 53/146 (36.30%), Postives = 76/146 (52.05%), Query Frame = 3 Query: 309 KSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLH 746 K +GS ++D GK+Y+D G+ TALG P LV A Q TL +H T +P+L L ++L+E A+ +V F NSG+EAN+T KL +Y P K K IA ++HG +L S+ G P F ++H Sbjct: 30 KGQGSRIWDQQGKEYVDFAGGIAVTALGHCHPALVNALKTQGETL--WHISNVFTNEPALRLGRKLIE---ATFAERVVFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIH 170
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: ARGD_ECO57 (Acetylornithine/succinyldiaminopimelate aminotransferase OS=Escherichia coli O157:H7 GN=argD PE=3 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 53/146 (36.30%), Postives = 76/146 (52.05%), Query Frame = 3 Query: 309 KSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLH 746 K +GS ++D GK+Y+D G+ TALG P LV A Q TL +H T +P+L L ++L+E A+ +V F NSG+EAN+T KL +Y P K K IA ++HG +L S+ G P F ++H Sbjct: 30 KGQGSRIWDQQGKEYVDFAGGIAVTALGHCHPALVNALKTQGETL--WHISNVFTNEPALRLGRKLIE---ATFAERVVFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPSDIIH 170 The following BLAST results are available for this feature:
BLAST of CB290404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 133
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290404 ID=CB290404; Name=CB290404; organism=Citrus sinensis; type=EST; length=783bpback to top |