CB290404

Overview
NameCB290404
Unique NameCB290404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12025 contig Csv1_Contig12025:21..804. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: ARGD_YARLI (Acetylornithine aminotransferase, mitochondrial OS=Yarrowia lipolytica GN=ARG8 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.179e-13
Identity = 48/150 (32.00%), Postives = 76/150 (50.67%), Query Frame = 3
Query:  297 LVIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL--DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFV 740
            +++ K +G+Y++D N  KY+D  +G+  TALG S P +      Q + L    + +N    P L   L +E L+        KVF  NSG+EAN+  +K        L  P+K +F+  +K++HG T+ A S++  P     F   AP V
Sbjct:   30 VILTKGKGAYLWDSNDNKYIDFSAGIAVTALGHSNPEITKILAEQSSQLMHCSNLFNNEWAPRLQESLVEETLKSGGMKGARKVFLANSGTEANEAALKFARKV-GTLSSPDKTEFVNFEKAFHGRTMGALSVTPNPKYQAPF---APLV 175          
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: ARGD_CLOAB (Acetylornithine aminotransferase OS=Clostridium acetobutylicum GN=argD PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.179e-13
Identity = 49/143 (34.27%), Postives = 73/143 (51.05%), Query Frame = 3
Query:  297 LVIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSF-WNRTTKPSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF 719
            +  +K EG+ +YD +G +Y+D +SG+    LG   P +V A   Q + L    ++ WN         A EL E+    S+  KVF  NSG+EA +  +KL   Y    G  NKK+ I    S+HG T+ A S++G P   + F
Sbjct:   15 VTFDKGEGTKLYDKDGNEYIDFVSGVAVNCLGHCNPSIVKAIEEQSSKLMHVSNYYWNEN-------AMELTEILCKNSEFDKVFMCNSGTEAIEAGLKLARKYALLHGDENKKEIIYMDNSFHGRTMGALSVTGQPKYQESF 150          
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: YODT_BACSU (Uncharacterized aminotransferase yodT OS=Bacillus subtilis GN=yodT PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.846e-13
Identity = 57/161 (35.40%), Postives = 77/161 (47.83%), Query Frame = 3
Query:  300 VIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAH 779
            V+  ++GSYVYD  GKKYLD  SG     +G     +      QL+ + F Y S +  T++P+  LA  LL       +   FF NSGSEA +T +K+   Y     +  K  F++R  SYHG TL A SLSG      +F            PH +R  H
Sbjct:   16 VVSYAKGSYVYDQTGKKYLDGSSGAVTCNIGHGVRDVTEKLKEQLDQVSFAYRSQF--TSEPAEQLAA-LLAQELPGDVNWSFFVNSGSEAIETAMKIAIQYWQEKKQTQKSIFLSRWSSYHGITLGALSLSGFYERRYRFTHLIERYPAISAPHIYRLNH 173          
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: BIOA_BUCBP (Adenosylmethionine-8-amino-7-oxononanoate aminotransferase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=bioA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.846e-13
Identity = 50/157 (31.85%), Postives = 84/157 (53.50%), Query Frame = 3
Query:  294 PLVIEKSEGSYVYDI-NGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL-SGLPALHQKFDLPAPFVLHTDCP 758
            P ++ KS    +  + NGKK +D +S  W T  G + PRL  A   Q+N +  +  F   T  P++ L K+L+E+ T + + ++F ++SGS + +  +K++  Y  +LG+ NK  F+  +KSYHG T  A S+     + HQ +    P  +  D P
Sbjct:   25 PCILVKSAKGIILKLHNGKKLIDGMSSWWSTIHGYNHPRLNNALKNQINKMS-HVMFGGITHYPAISLCKKLIEI-TPNSLTRIFLSDSGSVSIEIAIKMILQYWQSLGK-NKVIFLTIKKSYHGDTFAAMSVCDPKNSFHQFYHNFLPINIFADNP 178          
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: ASTC_PHOLL (Succinylornithine transaminase OS=Photorhabdus luminescens subsp. laumondii GN=astC PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.846e-13
Identity = 47/137 (34.31%), Postives = 73/137 (53.28%), Query Frame = 3
Query:  309 KSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF 719
            +++GS V+D +GK+Y+D   G+   +LG + P L      Q++ +  +H     T +P L LAK L+E   A K    FF NSG+EAN+  +KL   Y       NK + I+ + S+HG TL   ++ G P   Q +
Sbjct:   27 RAKGSKVWDQDGKEYIDFAGGIAVNSLGHAHPELKDELIYQIDKI--WHIGNGYTNEPVLKLAKRLVENTFADK---AFFCNSGAEANEAALKLARKYAADKYGKNKNEIISFKDSFHGRTLFTVTVGGQPKYSQDY 158          
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: ARGD_VIBPA (Acetylornithine aminotransferase OS=Vibrio parahaemolyticus GN=argD PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.846e-13
Identity = 47/137 (34.31%), Postives = 73/137 (53.28%), Query Frame = 3
Query:  309 KSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF 719
            + +GS ++D +  +Y+D   G+  + LG   P +V A T Q N L  +H     T +P+L LAK+L E+  A +   VFF NSG+EAN+  +KL   Y   +  P K + IA ++ +HG T    ++ G  A    F
Sbjct:   29 RGKGSRIWDQDDNEYIDFAGGIAVSCLGHCHPVMVDALTEQGNKL--WHLSNVMTNEPALRLAKKLTEVSFAER---VFFANSGAEANEAALKLARRYAADVHGPEKSEIIAFKQGFHGRTFFTVTVGGQAAYSDGF 160          
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: ARGD_STRAW (Acetylornithine aminotransferase OS=Streptomyces avermitilis GN=argD PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.854e-13
Identity = 51/166 (30.72%), Postives = 87/166 (52.41%), Query Frame = 3
Query:  255 APFTAGWQSTDVHP-----LVIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR-PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAP 734
            A  T  WQ   ++      L + +  G+ ++D +GK+YLD + G+   ALG + P +V A + Q+ +L    + +    +P + LA+ LL++F   +  +V+F NSG+EAN+   K        +GR   +   +A Q  +HG T+ A +L+G P   + F LP P
Sbjct:    8 AELTERWQGALMNNYGTPRLPLVRGAGTRLWDADGKEYLDFVGGIAVNALGHAHPAIVEAVSTQIASLGHVSNLF--VAEPPVALAERLLQLF--GRDGRVYFCNSGAEANEAAFK--------IGRLTGRSHMVATQGGFHGRTMGALALTGQPGKQEPF-LPLP 160          
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: ARGD_GLOVI (Acetylornithine aminotransferase OS=Gloeobacter violaceus GN=argD PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.081e-12
Identity = 47/151 (31.13%), Postives = 73/151 (48.34%), Query Frame = 3
Query:  297 LVIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMA-KVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLH 746
            +V E+ EG Y+ D  G++YLD ++G+    LG + P L AA   Q  TL    + +    +  L       E  TA   A +VFF NSG+EAN+  +KL   Y   +    + + I   +S+HG T+   + +G P   + F    P  +H
Sbjct:   20 VVFERGEGCYLEDSEGRRYLDFVAGIATCVLGHAHPVLSAAVAEQARTLIHVSNLYYTPQQACL------AEWLTAHSAADQVFFCNSGAEANEGAIKLARKYGRTVLGIAEPQIICAHQSFHGRTMATVTATGQPKYQKHFHPLVPGFVH 164          
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: ARGD_COREF (Acetylornithine aminotransferase OS=Corynebacterium efficiens GN=argD PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.081e-12
Identity = 46/141 (32.62%), Postives = 76/141 (53.90%), Query Frame = 3
Query:  294 PLVIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF-----TASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP 701
            P+ +   +GS V D +G  Y+D L+G+   ALG + P ++ A T QL+ L    + +   T+P +++A EL++ F     T +   +VFF NSG+EAN+   KL        GR    + +A    +HG T+ + +L+G P
Sbjct:   26 PVELVTGKGSTVTDADGNVYIDLLAGIAVNALGHAHPAIIEAVTTQLSQLGHVSNLF--ATRPVVEVAAELVQRFALDDATIASQTQVFFCNSGAEANEAAFKLA----RLTGR---HRILAATNGFHGRTMGSLALTGQP 157          
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: ARGD_ANASP (Acetylornithine aminotransferase OS=Anabaena sp. (strain PCC 7120) GN=argD PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.844e-12
Identity = 48/148 (32.43%), Postives = 74/148 (50.00%), Query Frame = 3
Query:  294 PLVIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL-DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAP 734
            PL +E+  G  V+D  GK+YLD ++G+    LG + P +V A T Q+  L   H   N    P   +LA+ +++   A    +VFF NSG+EAN+  +KL   Y + +    K   +    S+HG TL   + +G     + FD   P
Sbjct:   41 PLALERGAGCRVWDTQGKEYLDFVAGIATCTLGHAHPAMVEAVTRQIQKL---HHVSNLYYIPEQGELAQWIIQHSCAD---RVFFCNSGAEANEAAIKLARKYAHTVLDIEKPIILTANASFHGRTLATITATGQAKYQKYFDPLVP 182          
The following BLAST results are available for this feature:
BLAST of CB290404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
ARGD_YARLI2.179e-1332.00Acetylornithine aminotransferase, mitochondrial OS... [more]
ARGD_CLOAB2.179e-1334.27Acetylornithine aminotransferase OS=Clostridium ac... [more]
YODT_BACSU2.846e-1335.40Uncharacterized aminotransferase yodT OS=Bacillus ... [more]
BIOA_BUCBP2.846e-1331.85Adenosylmethionine-8-amino-7-oxononanoate aminotra... [more]
ASTC_PHOLL2.846e-1334.31Succinylornithine transaminase OS=Photorhabdus lum... [more]
ARGD_VIBPA2.846e-1334.31Acetylornithine aminotransferase OS=Vibrio parahae... [more]
ARGD_STRAW4.854e-1330.72Acetylornithine aminotransferase OS=Streptomyces a... [more]
ARGD_GLOVI1.081e-1231.13Acetylornithine aminotransferase OS=Gloeobacter vi... [more]
ARGD_COREF1.081e-1232.62Acetylornithine aminotransferase OS=Corynebacteriu... [more]
ARGD_ANASP1.844e-1232.43Acetylornithine aminotransferase OS=Anabaena sp. (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01bc06_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01bc06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290404 ID=CB290404; Name=CB290404; organism=Citrus sinensis; type=EST; length=783bp
GAACAGCTAAAACCGGGGAAAAAAAAAAAACACTCCGCCTTTGTTGCATG
TTAAGAGCAAAAATGGTGACCAGCAAGCTCCTTCAATCATCCCTCAAATC
CCAGATTGGTTCATTTACAAAGCATTTTTCTGCTTCCAAAAGTTTGTCGG
AGAACTTGTATCAAATCCCTTTGCTTGCCAGGTTCTATGGTACAGATGCG
TCTTTGCAAAAGGAAGATTCAACCACTAATGGGTTTAAGGGGCATGATAT
GCTGGCACCTTTCACAGCTGGGTGGCAGAGTACTGATGTGCATCCACTGG
TTATAGAAAAGTCTGAGGGTAGTTATGTTTACGACATCAATGGGAAGAAG
TATCTTGATTCTCTTTCTGGCCTATGGTGCACAGCCCTAGGGGGGAGTGA
ACCTCGCCTTGTGGCTGCTGCTACTGCACAATTGAATACCCTGCCATTTT
ACCACTCCTTCTGGAATCGTACCACAAAACCTTCTCTGGATCTTGCAAAG
GAGCTTTTAGAAATGTTTACCGCAAGTAAAATGGCCAAGGTTTTCTTTAC
TAATAGTGGATCAGAAGCCAATGACACTCAGGTCAAGCTGGTTTGGTATT
ACAATAATGCTCTTGGAAGACCAAACAAGAAGAAATTTATTGCACGACAA
AAATCGTACCATGGTTCAACTTTGATTGCAGCTAGTCTTTCTGGTCTTCC
AGCTTTGCACCAAAAATTTGATCTGCCGGCTCCCTTTGTATTGCACACTG
ACTGCCCTCATTATTGGCGCTACGCTCATCCAG
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