CB290405

Overview
NameCB290405
Unique NameCB290405
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290405 vs. ExPASy Swiss-Prot
Match: PPIB_SCHJA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.313e-46
Identity = 96/176 (54.55%), Postives = 119/176 (67.61%), Query Frame = -3
Query:  193 SDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSG 717
            S+ N  ++T KV+FD+E+  +P GRI++GLFGK VPKT ENF+ L  G     K G+   YKGSTFHR+I SFM+Q           G SIYGE+FPDENFKLKH G G LSMANAGP+TNG+QFFITT    WLDG+HVVFGKV+ GM VV ++E  +      P   V +A+ G
Sbjct:   23 SEGNGPKVTEKVFFDIEVDEQPLGRIIIGLFGKTVPKTVENFKQLSIGTTL--KDGRTAAYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGERFPDENFKLKHVGAGWLSMANAGPNTNGAQFFITTTQNPWLDGKHVVFGKVVEGMSVVRQIENMQTDSRDRPVKSVKIANCG 196          
BLAST of CB290405 vs. ExPASy Swiss-Prot
Match: PPID_YARLI (Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia lipolytica GN=CPR6 PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.714e-46
Identity = 96/167 (57.49%), Postives = 114/167 (68.26%), Query Frame = -3
Query:  190 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGE 687
            +V+F+V I GK  G+I   LF   VPKTAENFRALCTGEKG  ++G PLH+KGS+FHR+I  FM+Q           GESIYGEKFPDE F   H  P LLSMANAGP+TNGSQFFITT  T  LD +HVVFGK+LSG  +V ++E  E  +   PK  V + D GE
Sbjct:    5 RVFFEVAIGGKTIGKIYFELFADKVPKTAENFRALCTGEKGNTQAGIPLHFKGSSFHRVIKDFMVQGGDFTAGNGTGGESIYGEKFPDEAFPYPHDQPFLLSMANAGPNTNGSQFFITTTETPHLDNKHVVFGKLLSGKGIVRQIERTETGEQDRPKQPVTIVDCGE 171          
BLAST of CB290405 vs. ExPASy Swiss-Prot
Match: PPIA_STRCH (Peptidyl-prolyl cis-trans isomerase A OS=Streptomyces chrysomallus GN=ppiA PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.714e-46
Identity = 100/170 (58.82%), Postives = 115/170 (67.65%), Query Frame = -3
Query:  193 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVL--SGMDVVYKVEAEGRQNGTPKSKVVVADSG 696
            +T KVYFD+ I   PAGRI   LF   VPKTAENFRAL TGEKG G       Y GS+FHR+I  FMLQ           G+SIYGEKF DENF+LKH   GLLSMANAG +TNGSQFFITTV T WLDG+HVVFG+V     M +V K+EA G  +G   +KV +A+SG
Sbjct:    1 MTTKVYFDITIDDAPAGRITFNLFDDVVPKTAENFRALATGEKGFG-------YAGSSFHRVITDFMLQGGDFTRGDGTGGKSIYGEKFADENFQLKHDRVGLLSMANAGKNTNGSQFFITTVLTPWLDGKHVVFGEVADDDSMALVRKIEALGSSSGRTSAKVTIAESG 163          
BLAST of CB290405 vs. ExPASy Swiss-Prot
Match: PPIC_HUMAN (Peptidyl-prolyl cis-trans isomerase C OS=Homo sapiens GN=PPIC PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.239e-46
Identity = 97/170 (57.06%), Postives = 114/170 (67.06%), Query Frame = -3
Query:  190 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQ-NGTPKSKVVVADSGE 696
            +T KV+FDV I  K  GRIV+GLFGK VPKT ENF AL TGEKG G       YKGS FHR+I  FM+Q           G SIYGE FPDENFKLKH G G +SMANAGPDTNGSQFFIT    +WLDG+HVVFGKV+ GM VV+ +E +    +  P +   + +SG+
Sbjct:   36 VTAKVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVIDGMTVVHSIELQATDGHDRPLTNCSIINSGK 198          
BLAST of CB290405 vs. ExPASy Swiss-Prot
Match: PPID_DEBHA (Peptidyl-prolyl cis-trans isomerase D OS=Debaryomyces hansenii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.924e-46
Identity = 97/168 (57.74%), Postives = 116/168 (69.05%), Query Frame = -3
Query:  190 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKS-GKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGE 687
            KV+FD+   GKP GR+V  L+   VPKTAENFRALCTGEKG  +S GK LHYKGS FHRII  FM Q           GESIYGEKF DENF+L H  P LLSMANAG +TNGSQFFITTV T  L+G+HVVFG+V+ G  +V ++E  +  +N  P    +++D GE
Sbjct:    9 KVFFDISADGKPKGRVVFELYNDVVPKTAENFRALCTGEKGASESSGKQLHYKGSIFHRIIKDFMCQGGDFTHGSGIGGESIYGEKFEDENFQLTHDKPFLLSMANAGANTNGSQFFITTVPTPHLNGKHVVFGEVIQGKSIVRQLERCDKGENDKPVEDWIISDCGE 176          
BLAST of CB290405 vs. ExPASy Swiss-Prot
Match: CYP40_ARATH (Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabidopsis thaliana GN=CYP40 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.515e-46
Identity = 95/169 (56.21%), Postives = 115/169 (68.05%), Query Frame = -3
Query:  190 NKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIG-KSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGE 690
            +K + D+ I G+  GRIV+ L+   VPKTAENFR LCTGEKG+G  +G PLHYKG+ FHR+I  FM+Q           GESIYG KF DENF+LKH   G+LSMAN+GP+TNGSQFFITT  TS LDG+HVVFG+V  GM VV  +E     +   P   VV+ D GE
Sbjct:    4 SKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVSIEEQSCPSQDVVIHDCGE 172          
BLAST of CB290405 vs. ExPASy Swiss-Prot
Match: PPID_CANAL (Peptidyl-prolyl cis-trans isomerase D OS=Candida albicans GN=CPR6 PE=3 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 9.407e-45
Identity = 98/170 (57.65%), Postives = 114/170 (67.06%), Query Frame = -3
Query:  190 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIG-KSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXG---ESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGE 684
            VYFD+   GKP GR+V  L+   VPKTA NFR+LCTG+KGI  KSGKPL YK S FHR+I  FM Q           G   ESIYGEKF DENFKL H  P LLSMAN+GP+TNGSQFFITTV T  LDG+HVVFG+V+ G  +V ++E +E   N  P     +AD GE
Sbjct:    6 VYFDISCNGKPKGRVVFKLYDDVVPKTAANFRSLCTGDKGISPKSGKPLSYKDSIFHRVIKDFMCQGGDFTAPSDHLGTGGESIYGEKFEDENFKLNHNKPFLLSMANSGPNTNGSQFFITTVPTPHLDGKHVVFGEVIEGKSIVRQLERSEKGANDRPVEDWKIADCGE 175          
BLAST of CB290405 vs. ExPASy Swiss-Prot
Match: CYP11_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizopus oryzae GN=cyp11 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.096e-44
Identity = 98/171 (57.31%), Postives = 114/171 (66.67%), Query Frame = -3
Query:  190 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGK-SGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEG-RQNGTPKSKVVVADSGE 696
            I  +V+FD+++ G   GRIV+ LF   VPKTAENFRALCTGEKGIGK S  PLHYKGS FHRII  FM Q           GESIYG  FPDE+F  KH   GLLSMAN GP+T  SQFFITT  T  LDG+HVVFG+V+SG +VV  +E E       P   V++A+ GE
Sbjct:    2 INPRVFFDIDVDGNRIGRIVIELFADQVPKTAENFRALCTGEKGIGKVSNMPLHYKGSIFHRIIKGFMCQGGDFTHRTGKGGESIYGANFPDESFSRKHDTHGLLSMANRGPNTQTSQFFITTRPTPHLDGKHVVFGRVVSGYNVVEMMENEPVDDQDRPLHNVMIANCGE 172          
BLAST of CB290405 vs. ExPASy Swiss-Prot
Match: PPIE_DROME (Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster GN=cyp33 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.669e-44
Identity = 92/166 (55.42%), Postives = 110/166 (66.27%), Query Frame = -3
Query:  190 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 687
            +V+FD+ I G  AGRIVM L    VPKTAENFR LCT E+G G       YKG +FHR+IP FM Q           G+SIYG+KF DENF LKH   G LSMAN+G +TNGSQFFI T  T WLD +HVVFG V+SG +VV K+E  G ++GTP  K+V+   GE
Sbjct:  140 QVFFDIRIGGNDAGRIVMLLRADVVPKTAENFRQLCTHEQGYG-------YKGCSFHRVIPEFMCQGGDFTNNNGTGGKSIYGKKFNDENFNLKHNSFGTLSMANSGANTNGSQFFICTTKTDWLDNKHVVFGHVISGAEVVRKMERCGSKSGTPSQKIVIYSCGE 298          
BLAST of CB290405 vs. ExPASy Swiss-Prot
Match: PPIE_SCHMA (Peptidyl-prolyl cis-trans isomerase E OS=Schistosoma mansoni PE=1 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 7.964e-44
Identity = 92/181 (50.83%), Postives = 118/181 (65.19%), Query Frame = -3
Query:  190 IQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 732
            ++ KK  +NL     +V+FD+ I    AGRIVM L    VP+TAENFRALCTGE+G G       Y    FHR+IP FM Q           G+SIYG KF DENF+L+H G G+LSMAN+GP+TNGSQFFI T    WLDG+HVVFG+V+ G +VV K+E+ G ++G  K  V+++  GE
Sbjct:  102 MRTKKQKRNLP----RVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFG-------YHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKVKEPVIISRCGE 271          
The following BLAST results are available for this feature:
BLAST of CB290405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
PPIB_SCHJA1.313e-4654.55Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPID_YARLI1.714e-4657.49Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia ... [more]
PPIA_STRCH1.714e-4658.82Peptidyl-prolyl cis-trans isomerase A OS=Streptomy... [more]
PPIC_HUMAN2.239e-4657.06Peptidyl-prolyl cis-trans isomerase C OS=Homo sapi... [more]
PPID_DEBHA2.924e-4657.74Peptidyl-prolyl cis-trans isomerase D OS=Debaryomy... [more]
CYP40_ARATH6.515e-4656.21Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabi... [more]
PPID_CANAL9.407e-4557.65Peptidyl-prolyl cis-trans isomerase D OS=Candida a... [more]
CYP11_RHIOR2.096e-4457.31Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizo... [more]
PPIE_DROME4.669e-4455.42Peptidyl-prolyl cis-trans isomerase E OS=Drosophil... [more]
PPIE_SCHMA7.964e-4450.83Peptidyl-prolyl cis-trans isomerase E OS=Schistoso... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01bc07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01bc07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290405 ID=CB290405; Name=CB290405; organism=Citrus sinensis; type=EST; length=851bp
TTTTTTTTTTTTGAGAAAGGATCCCCTTAAAATGAAGCACCAGCTTGGCA
AACAACCTAGGACATTTTAAAATGTCTATTACATGATAAATAGGCAAATT
ATGAGTATCTTCATGAAGGTTGAAAAGACGAGAGGACTAAAAAGGTGTAT
AGCGTAATTATATAATTATGGGGGAAATCACAGAGGAAGTTCACCGCTGT
CTGCAACGACGACTTTGCTCTTCGGAGTGCCATTCTGCCTCCCTTCAGCT
TCAACCTTGTAAACTACATCCATCCCCGATAGCACCTTTCCAAATACAAC
ATGCCTGCCATCCAACCAGCTAGTTGTCACAGTTGTAATGAAGAATTGTG
AACCATTGGTGTCTGGACCAGCATTTGCCATTGACAAAAGCCCTGGGCCA
GTGTGCTTCAGTTTGAAATTTTCGTCAGGGAACTTCTCTCCATAAATTGA
CTCTCCACCTCTTCCATCACCAAGAGTGAAATCACCTCCTTGAAGCATAA
AGCTGGGAATAATCCTATGGAACGTACTTCCCTTGTAGTGGAGTGGCTTC
CCGCTCTTGCCAATCCCTTTCTCCCCTGTGCACAAAGCTCGGAAATTTTC
TGCAGTTTTAGGGACTGCCTTTCCAAAGAGACCCATTACAATACGTCCGG
CAGGTTTTCCAGCAATCTCAACGTCAAAGTAAACTTTGTTTGTGATTTCT
TTCAAATTCTGATCCGATTTCTTCGCCTGAATTGAAGAGAAAGTGGCCAA
CAGGACAATAGCCCATAGCATCGTGAGTGGAAGAAATTTTGTCGAAGCCA
TGTATCACTTCGTTGTTTCTCGTTTCGCAGTCACTCACTTTGGGGTTCCG
C
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