CB290405

Overview
NameCB290405
Unique NameCB290405
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290405 vs. ExPASy Swiss-Prot
Match: PPIB_ASPFU (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus fumigatus GN=cpr2 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.147e-50
Identity = 105/171 (61.40%), Postives = 123/171 (71.93%), Query Frame = -3
Query:  190 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG-TPKSKVVVADSGE 699
            +IT+KV+FD+E   KP GRIV+GL+GK VPKTAENFRAL TGEKG G       Y+GSTFHR+I SFM+Q           G+SIYGEKF DENFKL+HT  GLLSMANAG DTNGSQFFITTV T WLDGRHVVFG+VL G +VV ++E   +  G  P   V +  SG+
Sbjct:   33 KITSKVFFDIEHGDKPLGRIVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKSFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEVVEQIENVPKGPGDKPAETVKIVKSGQ 196          
BLAST of CB290405 vs. ExPASy Swiss-Prot
Match: PPIE_HUMAN (Peptidyl-prolyl cis-trans isomerase E OS=Homo sapiens GN=PPIE PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.498e-50
Identity = 103/179 (57.54%), Postives = 125/179 (69.83%), Query Frame = -3
Query:  190 AKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 726
            AKK+  N      +VY D++I  KPAGRI M L    VP TAENFR LCT EKG G       +KGS+FHRIIP FM Q           G+SIYG+KF DENF LKHTGPGLLSMAN+GP+TNGSQFF+T   T WLDG+HVVFG+V  G+DV+ ++EA+G ++G PK KV++AD GE
Sbjct:  133 AKKARSN-----PQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQKVIIADCGE 299          
BLAST of CB290405 vs. ExPASy Swiss-Prot
Match: PPIB_SCHMA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma mansoni GN=CYP PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.498e-50
Identity = 99/177 (55.93%), Postives = 127/177 (71.75%), Query Frame = -3
Query:  193 KSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQN-GTPKSKVVVADSG 720
            +S+ N  ++T+KV+FD+E+ GKP  RI++GLFGK VPKT ENF+ L  G +   K G+   YKGSTFHR+I SFM+Q           G SIYG++FPDENFKL+H G G LSMANAGPDTNGSQFFITTV TSWLDG+HVVFGKV+ GM++V ++E+E   +   P   + +A  G
Sbjct:   22 RSEANGPKVTDKVFFDIEVDGKPLARIIIGLFGKTVPKTVENFKQLSIGTQL--KDGRTASYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGDRFPDENFKLRHVGAGWLSMANAGPDTNGSQFFITTVKTSWLDGKHVVFGKVVEGMNIVRQIESETTDSRDRPVKSIKIASCG 196          
BLAST of CB290405 vs. ExPASy Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.498e-50
Identity = 106/171 (61.99%), Postives = 121/171 (70.76%), Query Frame = -3
Query:  190 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA-EGRQNGTPKSKVVVADSGE 699
            ++TNKVYFDVEI G+ AGRIVMGLFG+ VPKT ENFRALCTGEK  G       YKGS+FHRII  FM+Q           G SIYG KF DENF LKHTGPG+LSMANAGP+TNGSQFFI TV TSWLD +HVVFG+V+ GM +V  +E+ E R    PK    +   GE
Sbjct:   92 KVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYG-------YKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVPKKGCRIYACGE 255          
BLAST of CB290405 vs. ExPASy Swiss-Prot
Match: PPIB_YARLI (Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia lipolytica GN=CPR2 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.957e-50
Identity = 108/191 (56.54%), Postives = 131/191 (68.59%), Query Frame = -3
Query:  190 IVLLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGE 759
            + LLA F  +Q  +++ +  EIT+KVYFD++   +  G+IVMGL+G  VPKT ENFRALCTGE G G       YKGS FHR+I +FM+Q           GESIYG KFPDENF+LKHT P  LSMANAG DTNGSQFFITTV TSWLDG+HVVFG+VL G D+V  +E A       PK  + +AD+GE
Sbjct:   12 VALLAFF--VQPAQAEPDA-EITHKVYFDIKQGEESLGKIVMGLYGDVVPKTVENFRALCTGETGKG-------YKGSKFHRVIKNFMIQGGDFTRGDGTGGESIYGRKFPDENFQLKHTKPYKLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGQDIVDAIENAPTGARSNPKVDITIADAGE 192          
BLAST of CB290405 vs. ExPASy Swiss-Prot
Match: PPIE_PONAB (Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii GN=PPIE PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.556e-50
Identity = 103/179 (57.54%), Postives = 124/179 (69.27%), Query Frame = -3
Query:  190 AKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 726
            AKK+  N      +VY D++I  KPAGRI M L    VP TAENFR LCT EKG G       +KGS+FHRIIP FM Q           G+SIYG+KF DENF LKHTGPGLLSMAN+GP+TNGSQFF+T   T WLDG+HVVFG+V  G+DV+ ++EA G ++G PK KV++AD GE
Sbjct:  133 AKKARSN-----PQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEARGSKDGKPKQKVIIADCGE 299          
BLAST of CB290405 vs. ExPASy Swiss-Prot
Match: PPIE_MOUSE (Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus GN=Ppie PE=2 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.556e-50
Identity = 103/179 (57.54%), Postives = 125/179 (69.83%), Query Frame = -3
Query:  190 AKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 726
            AKK+  N      +VY D++I  KPAGRI M L    VP TAENFR LCT EKG G       +KGS+FHRIIP FM Q           G+SIYG+KF DENF LKHTGPGLLSMAN+GP+TNGSQFF+T   T WLDG+HVVFG+V  G+DV+ ++EA+G ++G PK KV++AD GE
Sbjct:  133 AKKARSN-----PQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQKVMIADCGE 299          
BLAST of CB290405 vs. ExPASy Swiss-Prot
Match: PPID_RHIOR (Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus oryzae GN=cyp12 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.556e-50
Identity = 106/166 (63.86%), Postives = 115/166 (69.28%), Query Frame = -3
Query:  190 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 687
            +VYFD+ I  KP GRIV  LF   VPKTAENFRALCTGEKG GKSGKPL Y+GS FHRII +FM+Q           GESIYGEKF DENF LKH  P LLSMANAGP TNGSQFFITTV T  LDG+HVVFGKVL G  VV  +E     +  P    V+A  GE
Sbjct:    5 RVYFDITIGNKPEGRIVFELFKDIVPKTAENFRALCTGEKGEGKSGKPLSYQGSLFHRIIKNFMIQGGDFTAGNGTGGESIYGEKFEDENFVLKHEKPFLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGKVLKGKAVVRALENLETVSDRPVEDAVIAKCGE 170          
BLAST of CB290405 vs. ExPASy Swiss-Prot
Match: PPID_ASPFU (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus fumigatus GN=cpr6 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.556e-50
Identity = 101/170 (59.41%), Postives = 119/170 (70.00%), Query Frame = -3
Query:  190 KVYFDVEIAGKPAGRIVMGL----FGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 687
            +VYFD++I  + AGRI + L    F   VPKTAENFRALCTGEKG+GK  KPL YKGS FHR+I  FM+Q           GESIYGEKFPDENF+LKH  P LLSMAN+GP TNGSQFFITTV T  LDG+HVVFG+V++G  +V K+E    Q   P + V + D GE
Sbjct:    9 RVYFDIQIGSQKAGRIALELVRLPFNDVVPKTAENFRALCTGEKGVGKQRKPLSYKGSIFHRVIKQFMIQGGDFTNFNGTGGESIYGEKFPDENFELKHDRPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSIVRKIENMPTQADKPTTDVTIVDCGE 178          
BLAST of CB290405 vs. ExPASy Swiss-Prot
Match: PPIB_RAT (Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus GN=Ppib PE=2 SV=3)

HSP 1 Score: 199.134 bits (505), Expect = 2.556e-50
Identity = 102/171 (59.65%), Postives = 118/171 (69.01%), Query Frame = -3
Query:  190 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGE 699
            ++T KVYFD +I  +P GR+  GLFGK VPKT +NF AL TGEKG G       YK S FHR+I  FM+Q           G+SIYGE+FPDENFKLKH GPG +SMANAG DTNGSQFFITTV TSWLDG+HVVFGKVL GMDVV KVE  +      P   V++ D G+
Sbjct:   41 KVTVKVYFDFQIGDEPVGRVTFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVENTKTDSRDKPLKDVIIVDCGK 204          
The following BLAST results are available for this feature:
BLAST of CB290405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
PPIB_ASPFU1.147e-5061.40Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIE_HUMAN1.498e-5057.54Peptidyl-prolyl cis-trans isomerase E OS=Homo sapi... [more]
PPIB_SCHMA1.498e-5055.93Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
CP20C_ARATH1.498e-5061.99Peptidyl-prolyl cis-trans isomerase CYP20-3, chlor... [more]
PPIB_YARLI1.957e-5056.54Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia ... [more]
PPIE_PONAB2.556e-5057.54Peptidyl-prolyl cis-trans isomerase E OS=Pongo abe... [more]
PPIE_MOUSE2.556e-5057.54Peptidyl-prolyl cis-trans isomerase E OS=Mus muscu... [more]
PPID_RHIOR2.556e-5063.86Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus ... [more]
PPID_ASPFU2.556e-5059.41Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
PPIB_RAT2.556e-5059.65Peptidyl-prolyl cis-trans isomerase B OS=Rattus no... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01bc07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01bc07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290405 ID=CB290405; Name=CB290405; organism=Citrus sinensis; type=EST; length=851bp
TTTTTTTTTTTTGAGAAAGGATCCCCTTAAAATGAAGCACCAGCTTGGCA
AACAACCTAGGACATTTTAAAATGTCTATTACATGATAAATAGGCAAATT
ATGAGTATCTTCATGAAGGTTGAAAAGACGAGAGGACTAAAAAGGTGTAT
AGCGTAATTATATAATTATGGGGGAAATCACAGAGGAAGTTCACCGCTGT
CTGCAACGACGACTTTGCTCTTCGGAGTGCCATTCTGCCTCCCTTCAGCT
TCAACCTTGTAAACTACATCCATCCCCGATAGCACCTTTCCAAATACAAC
ATGCCTGCCATCCAACCAGCTAGTTGTCACAGTTGTAATGAAGAATTGTG
AACCATTGGTGTCTGGACCAGCATTTGCCATTGACAAAAGCCCTGGGCCA
GTGTGCTTCAGTTTGAAATTTTCGTCAGGGAACTTCTCTCCATAAATTGA
CTCTCCACCTCTTCCATCACCAAGAGTGAAATCACCTCCTTGAAGCATAA
AGCTGGGAATAATCCTATGGAACGTACTTCCCTTGTAGTGGAGTGGCTTC
CCGCTCTTGCCAATCCCTTTCTCCCCTGTGCACAAAGCTCGGAAATTTTC
TGCAGTTTTAGGGACTGCCTTTCCAAAGAGACCCATTACAATACGTCCGG
CAGGTTTTCCAGCAATCTCAACGTCAAAGTAAACTTTGTTTGTGATTTCT
TTCAAATTCTGATCCGATTTCTTCGCCTGAATTGAAGAGAAAGTGGCCAA
CAGGACAATAGCCCATAGCATCGTGAGTGGAAGAAATTTTGTCGAAGCCA
TGTATCACTTCGTTGTTTCTCGTTTCGCAGTCACTCACTTTGGGGTTCCG
C
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