CB290406

Overview
NameCB290406
Unique NameCB290406
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290406 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.712e-54
Identity = 117/206 (56.80%), Postives = 135/206 (65.53%), Query Frame = 2
Query:   68 MASTKFLPLTM-LWAIVLLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG-TPKSKVVVADSGE 679
            MAS  FL L + L+  +       + A K       ITNKVYFD+E  GKP GRIVMGL+GK VPKTAENFRAL TG+   G+      Y+GS+FHRII +FM+Q            +SIYG KFPDENFKLKHTGPG+LSMANAG DTNGSQFFI TV T+WLD RHVVFG VL GMDVVY +E      G  P   + +A SGE
Sbjct:   11 MASKSFLSLLVALFVAICFVLSPGVDAAKGPV----ITNKVYFDIEHGGKPLGRIVMGLYGKTVPKTAENFRALATGKNSDGED-LGYGYEGSSFHRIIKNFMIQGGDFTKGDGTGGKSIYGSKFPDENFKLKHTGPGVLSMANAGRDTNGSQFFICTVKTAWLDNRHVVFGHVLEGMDVVYAMENVKTSRGDKPVEPITIAASGE 211          
BLAST of CB290406 vs. ExPASy Swiss-Prot
Match: PPIB_ORPSP (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) GN=CYPB PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.332e-54
Identity = 112/192 (58.33%), Postives = 130/192 (67.71%), Query Frame = 2
Query:  107 AIVLLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG-TPKSKVVVADSGE 679
            AIV LAT  S           ++TNKVYFD++   K  GRIV+GL+G+ VPKT ENFRAL TGEKG G       YK S FHR+I  FM+Q            +SIYGE+F DENFKL+HTGPG+LSMANAG DTNGSQFFITTVTTSWLDGRHVVFGKV+ GMDVV  +E      G  P + V++AD GE
Sbjct:   12 AIVALATLVSASTNP------KVTNKVYFDIKQGDKDLGRIVLGLYGEVVPKTVENFRALATGEKGYG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFADENFKLRHTGPGILSMANAGRDTNGSQFFITTVTTSWLDGRHVVFGKVIEGMDVVTAIETTKTLPGDRPATPVIIADCGE 190          
BLAST of CB290406 vs. ExPASy Swiss-Prot
Match: PPIB_NEUCR (Peptidyl-prolyl cis-trans isomerase B OS=Neurospora crassa GN=cpr-2 PE=3 SV=3)

HSP 1 Score: 210.69 bits (535), Expect = 8.270e-54
Identity = 116/205 (56.59%), Postives = 137/205 (66.83%), Query Frame = 2
Query:   68 MASTKFLPLTMLWAIVLLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGE 679
            +A+T FL   +L+A        S +A K  +    IT+KVYFD+E   KP GRIVMGL+GK VPKTAENFRAL TGEKG G       Y+GSTFHR+I  FM+Q            +SIYG+KFPDENFKLKH+  GLLSMANAG DTNGSQFFITTV TSWLDG+HVVFG+VL G DVV K+E  +      P   + +A SGE
Sbjct:    9 LAATLFLGAMLLFA-------QSAEAAKGPK----ITHKVYFDIEQGDKPLGRIVMGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKQFMIQGGDFTKGDGTGGKSIYGDKFPDENFKLKHSKKGLLSMANAGKDTNGSQFFITTVITSWLDGKHVVFGEVLEGYDVVEKIENTKTGPRDAPAEPIKIAKSGE 195          
BLAST of CB290406 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.560e-52
Identity = 98/166 (59.04%), Postives = 117/166 (70.48%), Query Frame = 2
Query:  182 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 679
            +V+FD+ ++G P GRI M LF    P TAENFRALCTGEKG+GK GKPLH+KGS FHR+IP FM Q            ESIYG KF DENF  KHTG G+LSMAN+GP+TNGSQFFI T  TSWLDG+HVVFG+V+ G+DVV  +E  G  +G     V + D G+
Sbjct:    5 RVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQ 170          
BLAST of CB290406 vs. ExPASy Swiss-Prot
Match: PPIB2_RHIOR (Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus oryzae GN=cyp9 PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.037e-52
Identity = 106/190 (55.79%), Postives = 127/190 (66.84%), Query Frame = 2
Query:  110 IVLLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSG 676
            I LL T  + +   ++     IT+K+YFD++   +  GRIV GL+GK VPKTAENF+ L TG+ G G       YKGSTFHR+I  FM+Q            +SIYG +FPDENFKL+HT PGLLSMANAGPD+NGSQFFITTV TSWLDG+HVVFGKVL GMDVV K+E         P   VV+AD G
Sbjct:   11 ITLLVTLCTFRFVSAESKGPVITDKIYFDIKQGEESLGRIVFGLYGKTVPKTAENFKQLATGQNGYG-------YKGSTFHRVIDQFMIQGGDFTNHDGTGGKSIYGSRFPDENFKLRHTVPGLLSMANAGPDSNGSQFFITTVVTSWLDGKHVVFGKVLEGMDVVTKIEKTPTNYRSKPNVDVVIADCG 193          
BLAST of CB290406 vs. ExPASy Swiss-Prot
Match: PPIA1_RHIOR (Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus oryzae GN=cyp2 PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.037e-52
Identity = 101/166 (60.84%), Postives = 119/166 (71.69%), Query Frame = 2
Query:  182 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 679
            KV+FDV    KP GRIVM L    VP+TAENFRALCTGEKG G       YKG +FHR+IP FMLQ            +SIYG KF DENF LKHTGPG LSMANAGP+TNGSQFFITT+  SWLDG+HVVFG+V  GMDVV  +E+ G  NGTP++K+++ + G+
Sbjct:    5 KVFFDVSANSKPLGRIVMELRADVVPQTAENFRALCTGEKGFG-------YKGCSFHRVIPEFMLQGGDFTNHNGTGGKSIYGNKFRDENFTLKHTGPGDLSMANAGPNTNGSQFFITTIKCSWLDGKHVVFGRVTEGMDVVQNIESLGSPNGTPRAKIIIDNCGQ 163          
BLAST of CB290406 vs. ExPASy Swiss-Prot
Match: PPIF_HUMAN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Homo sapiens GN=PPIF PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.660e-52
Identity = 100/165 (60.61%), Postives = 117/165 (70.91%), Query Frame = 2
Query:  185 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 679
            VY DV+  GKP GR+V+ L    VPKTAENFRALCTGEKG G       YKGSTFHR+IPSFM Q            +SIYG +FPDENF LKH GPG+LSMANAGP+TNGSQFFI T+ T WLDG+HVVFG V  GMDVV K+E+ G ++G    K+V+ D G+
Sbjct:   48 VYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQ 205          
BLAST of CB290406 vs. ExPASy Swiss-Prot
Match: PPIA2_RHIOR (Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.660e-52
Identity = 104/164 (63.41%), Postives = 118/164 (71.95%), Query Frame = 2
Query:  185 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSG 676
            VYFD+ I GKPAGRI   LF   VPKTA+NFRALCTGE+G G       YKGS FHR+IP FMLQ            +SIYGEKF DENFKLKH+ PGLLSMANAGP+TNGSQFFITTV  SWLDG HVVFGKV   M++V K+E+ G  +G  K+KVV+ D G
Sbjct:    3 VYFDISIDGKPAGRIEFQLFEDVVPKTAKNFRALCTGEQGFG-------YKGSKFHRVIPQFMLQGGDFTRGDGTGGKSIYGEKFADENFKLKHSEPGLLSMANAGPNTNGSQFFITTVPCSWLDGAHVVFGKVTKNMELVSKIESLGSASGAVKAKVVIEDCG 159          
BLAST of CB290406 vs. ExPASy Swiss-Prot
Match: PPID_EMENI (Peptidyl-prolyl cis-trans isomerase D OS=Emericella nidulans GN=cpr6 PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.538e-52
Identity = 100/166 (60.24%), Postives = 119/166 (71.69%), Query Frame = 2
Query:  182 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 679
            +V+FD++I  +  GRI   LF   VPKTAENFRALCTGEKG+GK GKPLH+KGS FHR+I  FM+Q            ESIYGEKFPDENF+LKH  P LLSMAN+GP TNGSQFFITTV T  LDG+HVVFG+V++G  VV K+E    Q   P + V +A+ GE
Sbjct:    8 RVFFDIQIGQQQTGRIAFELFNDVVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDRPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVVRKIENMPTQADKPTTDVTIAECGE 173          
BLAST of CB290406 vs. ExPASy Swiss-Prot
Match: CYPX_USEUD (Peptidyl-prolyl cis-trans isomerase OS=Unspecified eudicot DB-1992 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 7.740e-52
Identity = 107/165 (64.85%), Postives = 120/165 (72.73%), Query Frame = 2
Query:  188 YFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG-TPKSKVVVADSGE 679
            +FD+ I G+PAGRI+M LF   VPKTAENFRALCTGEKGIG SGK + Y+GS FHR+IP FMLQ            ESIYG KF DENF  KHT PGLLSMANAGP TNGSQFFITTV T  LDG+HVVFGKV+ GMDVV K+EA     G  P S+V +A  G+
Sbjct:    5 FFDMTIGGQPAGRIIMELFPD-VPKTAENFRALCTGEKGIGPSGKKMTYEGSVFHRVIPKFMLQGGDFTLGNGRGGESIYGAKFADENFIHKHTTPGLLSMANAGPGTNGSQFFITTVATPHLDGKHVVFGKVVEGMDVVRKIEATQTDRGDKPLSEVKIAKCGQ 168          
The following BLAST results are available for this feature:
BLAST of CB290406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
PPIB_CRYNE3.712e-5456.80Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
PPIB_ORPSP6.332e-5458.33Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyc... [more]
PPIB_NEUCR8.270e-5456.59Peptidyl-prolyl cis-trans isomerase B OS=Neurospor... [more]
CP18D_ARATH1.560e-5259.04Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
PPIB2_RHIOR2.037e-5255.79Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus... [more]
PPIA1_RHIOR2.037e-5260.84Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus... [more]
PPIF_HUMAN2.660e-5260.61Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIA2_RHIOR2.660e-5263.41Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus... [more]
PPID_EMENI4.538e-5260.24Peptidyl-prolyl cis-trans isomerase D OS=Emericell... [more]
CYPX_USEUD7.740e-5264.85Peptidyl-prolyl cis-trans isomerase OS=Unspecified... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01bc07_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01bc07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290406 ID=CB290406; Name=CB290406; organism=Citrus sinensis; type=EST; length=832bp
GCCGCAGTCTGCACTAAGCGGAACCCCAAAGTGAGCGTCTGCGAAACGAG
AAACAACGAAGTGATACATGGCTTCGACAAAATTTCTTCCACTCACGATG
CTATGGGCTATTGTCCTGTTGGCCACTTTCTCTTCAATTCAGGCGAAGAA
ATCGGATCAGAATTTGAAAGAAATCACAAACAAAGTTTACTTTGACGTTG
AGATTGCTGGAAAACCTGCCGGACGTATTGTAATGGGTCTCTTTGGAAAG
GCAGTCCCTAAAACTGCAGAAAATTTCCGAGCTTTGTGCACAGGGGAGAA
AGGGATTGGCAAGAGCGGGAAGCCACTCCACTACAAGGGAAGTACGTTCC
ATAGGATTATTCCCAGCTTTATGCTTCAAGGAGGTGATTTCACTCTTGGT
GATGGAAGAGGTGGAGAGTCAATTTATGGAGAGAAGTTCCCTGACGAAAA
TTTCAAACTGAAGCACACTGGCCCAGGGCTTTTGTCAATGGCAAATGCTG
GTCCAGACACCAATGGTTCACAATTCTTCATTACAACTGTGACAACTAGC
TGGTTGGATGGCAGGCATGTTGTATTTGGAAAGGTGCTATCGGGGATGGA
TGTAGTTTACAAGGTTGAAGCTGAAGGGAGGCAGAATGGCACTCCGAAGA
GCAAAGTCGTCGTTGCAGACAGCGGTGAACTTCCTCTGTGATTTCCCCCA
TAATTATATAATTACGCTATACACCTTTTTAGTCCTCTCGTCTTTTCAAC
CTTCATGAAGATACTCATAATTTGCCTATTTATCATGTAATAGACATTTT
AAAATGTCCTAGGTTGTTTGCCAAGCTGGTGC
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