CB290406

Overview
NameCB290406
Unique NameCB290406
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290406 vs. ExPASy Swiss-Prot
Match: PPIB_CHICK (Peptidyl-prolyl cis-trans isomerase B OS=Gallus gallus GN=PPIB PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.490e-50
Identity = 103/181 (56.91%), Postives = 125/181 (69.06%), Query Frame = 2
Query:  143 AKKSDQNLK--EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSG 676
            A ++D+  K  ++T KV+FD+ +  + AGR+V+GLFGK VPKT ENF AL TGEKG G       +KGS FHR+I  FM+Q            +SIYG++FPDENFKLKH GPG +SMANAG DTNGSQFFITTV T+WLDG+HVVFGKVL GMDVV KVE  +      P   V +AD G
Sbjct:   21 ASRADERKKGPKVTAKVFFDLRVGEEDAGRVVIGLFGKTVPKTVENFVALATGEKGFG-------FKGSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGDRFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVENTKTDSRDKPLKDVTIADCG 194          
BLAST of CB290406 vs. ExPASy Swiss-Prot
Match: PPIA_DROME (Peptidyl-prolyl cis-trans isomerase OS=Drosophila melanogaster GN=Cyp1 PE=1 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.490e-50
Identity = 98/165 (59.39%), Postives = 119/165 (72.12%), Query Frame = 2
Query:  182 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSG 676
            +V+FD+    +P GRIVM L    VPKTAENFRALCTGEKG G       YKGS FHR+IP+FM Q            +SIYG KFPDENF+LKHTG G+LSMANAG +TNGSQFFI TV T+WLD +HVVFG+V+ G+DVV K+E+ G Q+G    K++VA+SG
Sbjct:   68 RVFFDMTADNEPLGRIVMELRSDVVPKTAENFRALCTGEKGFG-------YKGSIFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFPDENFELKHTGSGILSMANAGANTNGSQFFICTVKTAWLDNKHVVFGEVVEGLDVVKKIESYGSQSGKTSKKIIVANSG 225          
BLAST of CB290406 vs. ExPASy Swiss-Prot
Match: PPIE_BOVIN (Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus GN=PPIE PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.547e-50
Identity = 96/166 (57.83%), Postives = 119/166 (71.69%), Query Frame = 2
Query:  182 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 679
            +VY D++I  KPAGRI M L    VP TAENFR LCT EKG G       +KGS+FHRIIP FM Q            +SIYG+KF DENF LKHTGPGLLSMAN+GP+TNGSQFF+T   T WLDG+HVVFG++  G+DV+ ++EA+G ++G PK KV+++D GE
Sbjct:  141 QVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEITDGLDVLRQIEAQGSKDGKPKQKVIISDCGE 299          
BLAST of CB290406 vs. ExPASy Swiss-Prot
Match: PPIB_BOVIN (Peptidyl-prolyl cis-trans isomerase B OS=Bos taurus GN=PPIB PE=1 SV=4)

HSP 1 Score: 197.978 bits (502), Expect = 5.547e-50
Identity = 103/173 (59.54%), Postives = 121/173 (69.94%), Query Frame = 2
Query:  170 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA---EGRQNGTPKSKVVVADSGE 679
            ++T KVYFD+ I  +  GR+V+GLFGK VPKT +NF AL TGEKG G       YK S FHR+I  FM+Q            +SIYGE+FPDENFKLKH GPG +SMANAG DTNGSQFFITTV T+WLDG+HVVFGKVL GMDVV KVE+   +GR    P   V +AD G+
Sbjct:   41 KVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFG-------YKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVESTKTDGRDK--PLKDVTIADCGK 204          
BLAST of CB290406 vs. ExPASy Swiss-Prot
Match: CYP5_CAEEL (Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhabditis elegans GN=cyn-5 PE=1 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 5.547e-50
Identity = 106/179 (59.22%), Postives = 119/179 (66.48%), Query Frame = 2
Query:  143 AKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG-TPKSKVVVADSG 676
            A+  D    ++T+KVYFD+EI GKP GRIV+GLFGK VPKTA NF  L    KG G       Y GS FHR+I  FM+Q             SIYGEKF DENFKLKH G G LSMANAG DTNGSQFFITTV T WLDGRHVVFGK+L GMDVV K+E   +  G  PK  V++A SG
Sbjct:   17 AQGDDAKGPKVTDKVYFDMEIGGKPIGRIVIGLFGKTVPKTATNFIELAKKPKGEG-------YPGSKFHRVIADFMIQGGDFTRGDGTGGRSIYGEKFADENFKLKHYGAGWLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKILEGMDVVRKIEQTEKLPGDRPKQDVIIAASG 188          
BLAST of CB290406 vs. ExPASy Swiss-Prot
Match: PPID_ASPOR (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus oryzae GN=cpr6 PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.245e-50
Identity = 99/166 (59.64%), Postives = 117/166 (70.48%), Query Frame = 2
Query:  182 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 679
            +V+FD++I  +  GRI + L    VPKTAENFRALCTGEKG+GK GKPLH+KGS FHR+I  FM+Q            ESIYGEKFPDENF+LKH  P LLSMAN+GP TNGSQFFITTV T  LDG+HVVFG+V++G  VV KVE    Q   P   V + + GE
Sbjct:    9 RVFFDIQIGNEKTGRIALELV--LVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDKPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVVRKVENMNTQADKPVKDVTIVECGE 172          
BLAST of CB290406 vs. ExPASy Swiss-Prot
Match: PPIA_SAGOE (Peptidyl-prolyl cis-trans isomerase A OS=Saguinus oedipus GN=PPIA PE=3 SV=3)

HSP 1 Score: 197.593 bits (501), Expect = 7.245e-50
Identity = 98/165 (59.39%), Postives = 114/165 (69.09%), Query Frame = 2
Query:  185 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 679
            V+FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI TV T WLDG+HVVFGKV  GM++V  +E  G +NG    K+ +AD G+
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTVKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQ 163          
BLAST of CB290406 vs. ExPASy Swiss-Prot
Match: PPIA_AOTTR (Peptidyl-prolyl cis-trans isomerase A OS=Aotus trivirgatus GN=PPIA PE=2 SV=3)

HSP 1 Score: 197.593 bits (501), Expect = 7.245e-50
Identity = 98/165 (59.39%), Postives = 114/165 (69.09%), Query Frame = 2
Query:  185 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 679
            V+FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI TV T WLDG+HVVFGKV  GM++V  +E  G +NG    K+ +AD G+
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTVKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQ 163          
BLAST of CB290406 vs. ExPASy Swiss-Prot
Match: PPIB_ARTBE (Peptidyl-prolyl cis-trans isomerase B OS=Arthroderma benhamiae GN=CPR2 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.236e-49
Identity = 102/172 (59.30%), Postives = 122/172 (70.93%), Query Frame = 2
Query:  170 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA--EGRQNGTPKSKVVVADSGE 679
            +IT+KVYFD+E  G+P GRIVMGL+GK VPKTAENFRAL TGEKG G       Y+GSTFHR+I  FM+Q            +SIYG KF DENFKL+HT  G+LSMANAG DTNGSQFFITT  T+WLDG+HVVFG+VL G D+V K++   +G Q+  P   V +   GE
Sbjct:   32 KITSKVYFDIEHDGQPLGRIVMGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKDFMIQGGDFTNGDGTGGKSIYGNKFEDENFKLRHTKKGVLSMANAGKDTNGSQFFITTAITAWLDGKHVVFGEVLEGYDIVDKIQVVPKGFQD-RPTKDVKIVKCGE 195          
BLAST of CB290406 vs. ExPASy Swiss-Prot
Match: PPIB_HUMAN (Peptidyl-prolyl cis-trans isomerase B OS=Homo sapiens GN=PPIB PE=1 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 1.614e-49
Identity = 99/171 (57.89%), Postives = 119/171 (69.59%), Query Frame = 2
Query:  170 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA-EGRQNGTPKSKVVVADSGE 679
            ++T KVYFD+ I  +  GR++ GLFGK VPKT +NF AL TGEKG G       YK S FHR+I  FM+Q            +SIYGE+FPDENFKLKH GPG +SMANAG DTNGSQFFITTV T+WLDG+HVVFGKVL GM+VV KVE+ +      P   V++AD G+
Sbjct:   41 KVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGK 204          
The following BLAST results are available for this feature:
BLAST of CB290406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
PPIB_CHICK2.490e-5056.91Peptidyl-prolyl cis-trans isomerase B OS=Gallus ga... [more]
PPIA_DROME2.490e-5059.39Peptidyl-prolyl cis-trans isomerase OS=Drosophila ... [more]
PPIE_BOVIN5.547e-5057.83Peptidyl-prolyl cis-trans isomerase E OS=Bos tauru... [more]
PPIB_BOVIN5.547e-5059.54Peptidyl-prolyl cis-trans isomerase B OS=Bos tauru... [more]
CYP5_CAEEL5.547e-5059.22Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhab... [more]
PPID_ASPOR7.245e-5059.64Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
PPIA_SAGOE7.245e-5059.39Peptidyl-prolyl cis-trans isomerase A OS=Saguinus ... [more]
PPIA_AOTTR7.245e-5059.39Peptidyl-prolyl cis-trans isomerase A OS=Aotus tri... [more]
PPIB_ARTBE1.236e-4959.30Peptidyl-prolyl cis-trans isomerase B OS=Arthroder... [more]
PPIB_HUMAN1.614e-4957.89Peptidyl-prolyl cis-trans isomerase B OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01bc07_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01bc07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290406 ID=CB290406; Name=CB290406; organism=Citrus sinensis; type=EST; length=832bp
GCCGCAGTCTGCACTAAGCGGAACCCCAAAGTGAGCGTCTGCGAAACGAG
AAACAACGAAGTGATACATGGCTTCGACAAAATTTCTTCCACTCACGATG
CTATGGGCTATTGTCCTGTTGGCCACTTTCTCTTCAATTCAGGCGAAGAA
ATCGGATCAGAATTTGAAAGAAATCACAAACAAAGTTTACTTTGACGTTG
AGATTGCTGGAAAACCTGCCGGACGTATTGTAATGGGTCTCTTTGGAAAG
GCAGTCCCTAAAACTGCAGAAAATTTCCGAGCTTTGTGCACAGGGGAGAA
AGGGATTGGCAAGAGCGGGAAGCCACTCCACTACAAGGGAAGTACGTTCC
ATAGGATTATTCCCAGCTTTATGCTTCAAGGAGGTGATTTCACTCTTGGT
GATGGAAGAGGTGGAGAGTCAATTTATGGAGAGAAGTTCCCTGACGAAAA
TTTCAAACTGAAGCACACTGGCCCAGGGCTTTTGTCAATGGCAAATGCTG
GTCCAGACACCAATGGTTCACAATTCTTCATTACAACTGTGACAACTAGC
TGGTTGGATGGCAGGCATGTTGTATTTGGAAAGGTGCTATCGGGGATGGA
TGTAGTTTACAAGGTTGAAGCTGAAGGGAGGCAGAATGGCACTCCGAAGA
GCAAAGTCGTCGTTGCAGACAGCGGTGAACTTCCTCTGTGATTTCCCCCA
TAATTATATAATTACGCTATACACCTTTTTAGTCCTCTCGTCTTTTCAAC
CTTCATGAAGATACTCATAATTTGCCTATTTATCATGTAATAGACATTTT
AAAATGTCCTAGGTTGTTTGCCAAGCTGGTGC
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