CB290413
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290413 vs. ExPASy Swiss-Prot
Match: G3P_COCP7 (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides posadasii (strain C735) GN=GPD PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.234e-12 Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 8 GDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMS 142 GD S IFDA AGIAL+ F+KLV+WYDNEWGYS RV+DLI +++ Sbjct: 287 GDPHSCIFDATAGIALNDHFIKLVAWYDNEWGYSRRVIDLIAYIA 331
BLAST of CB290413 vs. ExPASy Swiss-Prot
Match: G3PA_GUITH (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Guillardia theta GN=GAPC1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.234e-12 Identity = 30/42 (71.43%), Postives = 38/42 (90.48%), Query Frame = 2 Query: 20 SSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 145 SS FDA+AGI+L+ +FVKLV+WYDNEWGYS RV DL+VH++K Sbjct: 338 SSTFDAEAGISLNPRFVKLVAWYDNEWGYSNRVKDLMVHVAK 379
BLAST of CB290413 vs. ExPASy Swiss-Prot
Match: G3P1_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap1 PE=3 SV=4) HSP 1 Score: 69.707 bits (169), Expect = 5.234e-12 Identity = 31/46 (67.39%), Postives = 37/46 (80.43%), Query Frame = 2 Query: 2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHM 139 F GD+ SSIFDA AGI L+ F K+V+WYDNEWGYS RVVDL++ M Sbjct: 289 FQGDTHSSIFDAGAGIELNSNFFKVVAWYDNEWGYSNRVVDLMLSM 334
BLAST of CB290413 vs. ExPASy Swiss-Prot
Match: G3P1_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena sp. (strain PCC 7120) GN=gap1 PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 5.234e-12 Identity = 31/46 (67.39%), Postives = 37/46 (80.43%), Query Frame = 2 Query: 2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHM 139 F GD+ SSIFDA AGI L+ F K+V+WYDNEWGYS RVVDL++ M Sbjct: 289 FQGDTHSSIFDAGAGIELNSNFFKVVAWYDNEWGYSNRVVDLMLSM 334
BLAST of CB290413 vs. ExPASy Swiss-Prot
Match: G3P_MUSPF (Glyceraldehyde-3-phosphate dehydrogenase OS=Mustela putorius furo GN=GAPDH PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.836e-12 Identity = 32/50 (64.00%), Postives = 40/50 (80.00%), Query Frame = 2 Query: 2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 151 F D+ SS FDA AGIAL+ FVKL+SWYDNE+GYS RVVDL+V+M+ + Sbjct: 284 FNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVYMASKE 333
BLAST of CB290413 vs. ExPASy Swiss-Prot
Match: G3P_CRIGR (Glyceraldehyde-3-phosphate dehydrogenase OS=Cricetulus griseus GN=GAPDH PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 6.836e-12 Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = 2 Query: 2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 151 F DS SS FDA AGIAL+ FVKL+SWYDNE+GYS RVVDL+ +M+ + Sbjct: 284 FNSDSHSSTFDAGAGIALNDNFVKLISWYDNEFGYSNRVVDLMAYMASKE 333
BLAST of CB290413 vs. ExPASy Swiss-Prot
Match: G3P_CANFA (Glyceraldehyde-3-phosphate dehydrogenase OS=Canis familiaris GN=GAPDH PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 6.836e-12 Identity = 32/50 (64.00%), Postives = 40/50 (80.00%), Query Frame = 2 Query: 2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 151 F D+ SS FDA AGIAL+ FVKL+SWYDNE+GYS RVVDL+V+M+ + Sbjct: 284 FNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVYMASKE 333
BLAST of CB290413 vs. ExPASy Swiss-Prot
Match: G3P_PONAB (Glyceraldehyde-3-phosphate dehydrogenase OS=Pongo abelii GN=GAPDH PE=2 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 8.928e-12 Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 2 Query: 11 DSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 151 D+ SS FDA AGIAL+ FVKL+SWYDNE+GYS RVVDL+ HM+ + Sbjct: 289 DTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMAHMASKE 335
BLAST of CB290413 vs. ExPASy Swiss-Prot
Match: G3P_RABIT (Glyceraldehyde-3-phosphate dehydrogenase OS=Oryctolagus cuniculus GN=GAPDH PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 1.166e-11 Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = 2 Query: 2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 151 F + SS FDA AGIAL+ FVKL+SWYDNE+GYS RVVDL+VHM+ + Sbjct: 284 FNSATHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMASKE 333
BLAST of CB290413 vs. ExPASy Swiss-Prot
Match: G3P_ONCMY (Glyceraldehyde-3-phosphate dehydrogenase OS=Oncorhynchus mykiss GN=gapdh PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.166e-11 Identity = 29/46 (63.04%), Postives = 39/46 (84.78%), Query Frame = 2 Query: 2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHM 139 F+GD+ SS+FDA AGI+ + FVKL+SWYDNE+GYS RV DL+++M Sbjct: 286 FIGDTHSSMFDAGAGISFNDNFVKLISWYDNEFGYSHRVADLLLYM 331 The following BLAST results are available for this feature:
BLAST of CB290413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290413 ID=CB290413; Name=CB290413; organism=Citrus sinensis; type=EST; length=407bpback to top |