CB290413
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290413 vs. ExPASy Swiss-Prot
Match: G3P_LYOSH (Glyceraldehyde-3-phosphate dehydrogenase OS=Lyophyllum shimeji GN=GPD PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.523e-11 Identity = 30/44 (68.18%), Postives = 35/44 (79.55%), Query Frame = 2 Query: 2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIV 133 F+G SSIFDA+AGI L+ FVKL+ WYDNEWGYS RV DL+V Sbjct: 284 FIGHHASSIFDAQAGIQLNPNFVKLIVWYDNEWGYSARVCDLLV 327
BLAST of CB290413 vs. ExPASy Swiss-Prot
Match: G3P1_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Synechocystis sp. (strain PCC 6803) GN=gap1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.523e-11 Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 2 Query: 2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMS 142 F D RSSIFDA AGI L+ F K+VSWYDNEWGYS RV+DL++ M+ Sbjct: 287 FRTDPRSSIFDAGAGIGLNSNFFKVVSWYDNEWGYSCRVIDLMLTMA 333
BLAST of CB290413 vs. ExPASy Swiss-Prot
Match: G3P_RAT (Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus GN=Gapdh PE=1 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 1.989e-11 Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = 2 Query: 2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 151 F +S SS FDA AGIAL+ FVKL+SWYDNE+GYS RVVDL+ +M+ + Sbjct: 284 FNSNSHSSTFDAGAGIALNDNFVKLISWYDNEYGYSNRVVDLMAYMASKE 333
BLAST of CB290413 vs. ExPASy Swiss-Prot
Match: G3P_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus GN=Gapdh PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 1.989e-11 Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = 2 Query: 2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 151 F +S SS FDA AGIAL+ FVKL+SWYDNE+GYS RVVDL+ +M+ + Sbjct: 284 FNSNSHSSTFDAGAGIALNDNFVKLISWYDNEYGYSNRVVDLMAYMASKE 333
BLAST of CB290413 vs. ExPASy Swiss-Prot
Match: G3P_CHLPN (Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamydia pneumoniae GN=gap PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.989e-11 Identity = 30/48 (62.50%), Postives = 39/48 (81.25%), Query Frame = 2 Query: 2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 145 F+G SSIFDA AGIAL+ +F KLV+WYDNE GY+TR+VDL+ ++ K Sbjct: 285 FIGSEYSSIFDALAGIALNDRFFKLVAWYDNETGYATRIVDLLEYVEK 332
BLAST of CB290413 vs. ExPASy Swiss-Prot
Match: G3P3_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Caenorhabditis elegans GN=gpd-3 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.989e-11 Identity = 32/47 (68.09%), Postives = 39/47 (82.98%), Query Frame = 2 Query: 2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMS 142 FV D+ SSIFDA A I+L+ FVKLVSWYDNE+GYS RVVDLI +++ Sbjct: 292 FVSDTNSSIFDAGASISLNPHFVKLVSWYDNEFGYSNRVVDLISYIA 338
BLAST of CB290413 vs. ExPASy Swiss-Prot
Match: G3P2_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caenorhabditis elegans GN=gpd-2 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 1.989e-11 Identity = 32/47 (68.09%), Postives = 39/47 (82.98%), Query Frame = 2 Query: 2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMS 142 FV D+ SSIFDA A I+L+ FVKLVSWYDNE+GYS RVVDLI +++ Sbjct: 292 FVSDTNSSIFDAGASISLNPHFVKLVSWYDNEFGYSNRVVDLISYIA 338
BLAST of CB290413 vs. ExPASy Swiss-Prot
Match: G3P_RALSO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ralstonia solanacearum GN=gapA PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 2.598e-11 Identity = 28/42 (66.67%), Postives = 37/42 (88.10%), Query Frame = 2 Query: 2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDL 127 F GD+R+SIFDA+AGIAL F+K+VSWYDNEWGYS +V+++ Sbjct: 285 FRGDARTSIFDAEAGIALDGTFIKVVSWYDNEWGYSNKVLEM 326
BLAST of CB290413 vs. ExPASy Swiss-Prot
Match: G3P3_CAEBR (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Caenorhabditis briggsae GN=gpd-3 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.393e-11 Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 2 Query: 2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMS 142 FV D+ SSIFDA A I L+ FVKL+SWYDNE+GYS RVVDLI +++ Sbjct: 292 FVSDTHSSIFDAGASIILNPNFVKLISWYDNEFGYSNRVVDLISYIA 338
BLAST of CB290413 vs. ExPASy Swiss-Prot
Match: G3P2_CAEBR (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caenorhabditis briggsae GN=gpd-2 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.393e-11 Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 2 Query: 2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMS 142 FV D+ SSIFDA A I L+ FVKL+SWYDNE+GYS RVVDLI +++ Sbjct: 292 FVSDTHSSIFDAGASIILNPNFVKLISWYDNEFGYSNRVVDLISYIA 338 The following BLAST results are available for this feature:
BLAST of CB290413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290413 ID=CB290413; Name=CB290413; organism=Citrus sinensis; type=EST; length=407bpback to top |