CB290428

Overview
NameCB290428
Unique NameCB290428
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length611
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CB290428 vs. ExPASy Swiss-Prot
Match: H32_TETBO (Histone H3.2 (Fragment) OS=Tetrahymena borealis PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.030e-12
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = -2 
Query:  431 MARTKQTARKSTGGKAPRKQLATKAARKFAPTTGGVKKPHR 553
            MAR KQTARKSTG +APRKQLA+KAARK AP TGG+KKPHR
Sbjct:    1 MARAKQTARKSTGAEAPRKQLASKAARKSAPATGGIKKPHR 41
The following BLAST results are available for this feature:
BLAST of CB290428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H32_TETBO2.030e-1282.93Histone H3.2 (Fragment) OS=Tetrahymena borealis PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01bd09_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01bd09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290428 ID=CB290428; Name=CB290428; organism=Citrus sinensis; type=EST; length=611bp
TTTTTTTTTTTTTTTTTATCCAACAAATATCAAATCCCAAATATTCTTCA
ATCCATCATATCATTCTTTACATGGAAAAACCGGAATAAAGAAAAACTAG
CAAACTAAATAGGAAACTGACGACTACATAAGGAATCACAAATTAAGCAC
GCTCGCCTCGGATTCGCCTTGCCAGTTGAATATCCTTGGGCATAATGGGG
ACTCGCTTGGCATGGATAGCACAAAGGTTGGTGTCCTCGAACAGACCCAC
GAGATAAGCCTCTGCCGCTTCCTGCAGCGCAAGAACCGCGTGGCTTTGGA
ACCTCAAATCTGTCTTGAAATCTTGAGCAATTTCACGAACCAGCCGCTGA
AAAGGCAGCTTGCGGATCAAAAGCTCAGTGCTCTTCTGATATTTGCGGAT
TTCACGGAGGGCGACAGTTCCTGGACGGTAACGATGAGGCTTCTTGACTC
CACCAGTTGTTGGAGCAAATTTTCTTGCAGCCTTTGTGGCGAGCTGCTTC
CTCGGAGCCTTTCCTCCAGTTGACTTGCGCGCGGTTTGCTTCGTACGGGC
CATTACTCTTTAATCACCAACACAAACTGCAAAATGCACAGATCTGAATG
CAACCCTCGTG
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