CB290429
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290429 vs. ExPASy Swiss-Prot
Match: H33_TETTH (Histone H3.3 OS=Tetrahymena thermophila GN=HHT3 PE=1 SV=2) HSP 1 Score: 233.032 bits (593), Expect = 9.143e-61 Identity = 116/135 (85.93%), Postives = 128/135 (94.81%), Query Frame = 3 Query: 60 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 464 MARTKQTARKSTG KAPRKQLATKAARKSAP +GGVKKPH++RPGTVALREIRKYQK+T+LLIRKLPFQRLVR+IA + K+D+RFQS A+LALQEAAEAYLVGLFEDTNLCAIHA+RVTIM KD+ LARRIRGER Sbjct: 1 MARTKQTARKSTGVKAPRKQLATKAARKSAPVSGGVKKPHKFRPGTVALREIRKYQKTTDLLIRKLPFQRLVRDIAMEMKSDIRFQSQAILALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDLHLARRIRGER 135
BLAST of CB290429 vs. ExPASy Swiss-Prot
Match: H34_TETTH (Histone H3.4 OS=Tetrahymena thermophila GN=HHT4 PE=2 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 3.841e-59 Identity = 113/135 (83.70%), Postives = 126/135 (93.33%), Query Frame = 3 Query: 60 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 464 MARTKQTARKST KAPRKQLA KAARKSAP +GG+KKPH++RPGTVALREIRKYQK+T+LLIRKLPFQRLVR+IA + K+D+RFQS A+LALQEAAEAYLVGLFEDTNLCAIHA+RVTIM KD+ LARRIRGER Sbjct: 1 MARTKQTARKSTSIKAPRKQLAAKAARKSAPISGGIKKPHKFRPGTVALREIRKYQKTTDLLIRKLPFQRLVRDIAMEMKSDIRFQSQAILALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDLHLARRIRGER 135
BLAST of CB290429 vs. ExPASy Swiss-Prot
Match: H33B_DICDI (Histone H3.3 type b OS=Dictyostelium discoideum GN=H3b PE=1 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.236e-57 Identity = 112/136 (82.35%), Postives = 125/136 (91.91%), Query Frame = 3 Query: 60 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 467 MARTKQTARKSTG K PRK L K+++KS P+T G+KK HR+RPGTVALREIR+YQKS+ELLI+KLPFQRLVREIAQ+FKTDLRFQ+ A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIM KDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGAKVPRKHLGNKSSQKSFPSTQGLKKTHRFRPGTVALREIRRYQKSSELLIKKLPFQRLVREIAQEFKTDLRFQAAAIQALQEASEAYLVGLFEDTNLCAIHAKRVTIMVKDIQLARRIRGERA 136
BLAST of CB290429 vs. ExPASy Swiss-Prot
Match: H33A_DICDI (Histone H3.3 type a OS=Dictyostelium discoideum GN=H3a PE=1 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.108e-57 Identity = 114/139 (82.01%), Postives = 124/139 (89.21%), Query Frame = 3 Query: 60 MARTKQTARKSTGGKAPRKQLATKAARKSAP---TTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 467 MARTKQTARKSTG K PRK + +K A K P ++GGVKK HR+RPGTVALREIRKYQKST+LLIRKLPFQRLVREIAQ+FKTDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDI LARRIRGER+ Sbjct: 1 MARTKQTARKSTGAKVPRKHIGSKQAHKQTPVSSSSGGVKKVHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQEFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIHLARRIRGERS 139
BLAST of CB290429 vs. ExPASy Swiss-Prot
Match: H3_YARLI (Histone H3 OS=Yarrowia lipolytica GN=HHT1 PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 3.975e-56 Identity = 115/139 (82.73%), Postives = 123/139 (88.49%), Query Frame = 3 Query: 60 MARTKQT--ARKSTGGKAPRKQLATKAARKSAP---TTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 461 MARTK T ARK TGGKAPRKQ+ +KAARKSA T+GGVKKPHRY+PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQE+ EAYLV LFEDTNLCAIHAKRVTI KDI LARR+RGE Sbjct: 1 MARTKSTVIARKVTGGKAPRKQIGSKAARKSAAPSNTSGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQKKDIHLARRLRGE 139
BLAST of CB290429 vs. ExPASy Swiss-Prot
Match: H33C_DICDI (Histone H3.3 type c OS=Dictyostelium discoideum GN=H3c PE=1 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 1.670e-54 Identity = 108/136 (79.41%), Postives = 121/136 (88.97%), Query Frame = 3 Query: 60 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 467 MARTKQTARKSTG K PRK L++K++ S P +KK HR+RPGTVALREIR+YQKS++LLI+KLPFQRLVREIAQ+FKTDLRFQ+ A+ ALQEA EAYLVGLFEDTNLCAIHAKRVTIM KDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGAKVPRKHLSSKSSFPSKPVNEVLKKTHRFRPGTVALREIRRYQKSSDLLIKKLPFQRLVREIAQEFKTDLRFQAAAIEALQEATEAYLVGLFEDTNLCAIHAKRVTIMVKDIQLARRIRGERA 136
BLAST of CB290429 vs. ExPASy Swiss-Prot
Match: H3L_MOUSE (Putative histone H3-like OS=Mus musculus PE=5 SV=2) HSP 1 Score: 209.149 bits (531), Expect = 1.414e-53 Identity = 112/136 (82.35%), Postives = 119/136 (87.50%), Query Frame = 3 Query: 60 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 467 MA TKQTARKST GKAPRKQLATKAA KSAP+TGGVKK HRYRP TVAL EIR+Y STELLI KLPFQRLV+EIAQDFKTDLRFQS A+ ALQEA+EA VGLFEDTNLCAIHAK VT++PKDIQLA I GERA Sbjct: 1 MAHTKQTARKSTCGKAPRKQLATKAAXKSAPSTGGVKKSHRYRPDTVALLEIRRYH-STELLIHKLPFQRLVQEIAQDFKTDLRFQSAAIGALQEASEANRVGLFEDTNLCAIHAKCVTVIPKDIQLAHSILGERA 135
BLAST of CB290429 vs. ExPASy Swiss-Prot
Match: H33L3_CAEEL (Putative histone H3.3-like type 3 OS=Caenorhabditis elegans GN=his-69 PE=5 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.414e-53 Identity = 105/123 (85.37%), Postives = 114/123 (92.68%), Query Frame = 3 Query: 96 GGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 464 GGKAPRKQLATKAARK+A G VKKPHR+RPGTVALREIR+YQKST+LL+RKLPFQRLVREIAQD K DLRFQS A+ ALQEA+E +LVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGER Sbjct: 4 GGKAPRKQLATKAARKNAIVVGAVKKPHRFRPGTVALREIRRYQKSTDLLLRKLPFQRLVREIAQDVKQDLRFQSAAIQALQEASEYFLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGER 126
BLAST of CB290429 vs. ExPASy Swiss-Prot
Match: H3_GUITH (Histone H3 OS=Guillardia theta PE=3 SV=3) HSP 1 Score: 192.971 bits (489), Expect = 1.049e-48 Identity = 100/134 (74.63%), Postives = 113/134 (84.33%), Query Frame = 3 Query: 60 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 461 MARTKQTARK+ GG +++ K A+ +KK HRY+PGTVALREIRKYQKST LLIRKLPFQRLVRE+AQD+K+DLRFQ+ AVLALQEA+E+YLV LFEDTNLCAIHAKRVTIMPKDI LARRIRGE Sbjct: 1 MARTKQTARKTVGGDI-NSRISEKRAKSDNSKNIDLKKVHRYKPGTVALREIRKYQKSTNLLIRKLPFQRLVRELAQDYKSDLRFQNSAVLALQEASESYLVNLFEDTNLCAIHAKRVTIMPKDIYLARRIRGE 133
BLAST of CB290429 vs. ExPASy Swiss-Prot
Match: H34_STYLE (Histone H3-4 (Fragment) OS=Stylonychia lemnae GN=H3-4 PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.369e-48 Identity = 96/111 (86.49%), Postives = 102/111 (91.89%), Query Frame = 3 Query: 93 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 425 TG KAPRK LA KAARK+AP GGVKKPHR+RPGTVALREIRKYQKSTELLIRKLPFQRLVREIA D+K+DLRFQS AV A+QEAAEAY+VGLFEDTNLCAIHA RVTIMP Sbjct: 2 TGAKAPRKALANKAARKTAPADGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIASDYKSDLRFQSSAVAAIQEAAEAYMVGLFEDTNLCAIHAGRVTIMP 112 The following BLAST results are available for this feature:
BLAST of CB290429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290429 ID=CB290429; Name=CB290429; organism=Citrus sinensis; type=EST; length=622bpback to top |