CB290429
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290429 vs. ExPASy Swiss-Prot
Match: CENPA_SCHPO (Histone H3-like centromeric protein cnp1 OS=Schizosaccharomyces pombe GN=cnp1 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.987e-31 Identity = 72/99 (72.73%), Postives = 84/99 (84.85%), Query Frame = 3 Query: 180 RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF----KTD--LRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 458 RYRPGT ALREIRKYQ+ST+LLI++LPF R+VREI+ +F TD LR+QS A+ LQEAAEA+LV LFEDTNLCAIHAKRVTIM +D+QLARRIRG Sbjct: 21 RYRPGTTALREIRKYQRSTDLLIQRLPFSRIVREISSEFVANFSTDVGLRWQSTALQCLQEAAEAFLVHLFEDTNLCAIHAKRVTIMQRDMQLARRIRG 119
BLAST of CB290429 vs. ExPASy Swiss-Prot
Match: H3L_ENCCU (Histone H3-like protein OS=Encephalitozoon cuniculi GN=ECU09_0450 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 9.859e-31 Identity = 71/135 (52.59%), Postives = 97/135 (71.85%), Query Frame = 3 Query: 60 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTG---GVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 455 M+RTKQTA K+ GGKAPRK ++ K S P++G + K R++ G +AL+EIRKYQKST+LLIRK PFQR+VR++ + + +RFQ+ A++A QEA E +L L ED C +HAKRVT+MPKDI L +I+ Sbjct: 1 MSRTKQTASKALGGKAPRKGISAK----SIPSSGCSPAMPKRTRFKAGALALKEIRKYQKSTDLLIRKRPFQRMVRDLCKG-REGVRFQASAIVAFQEAVENFLTSLMEDAYRCVLHAKRVTLMPKDICLVYKIK 130
BLAST of CB290429 vs. ExPASy Swiss-Prot
Match: CENPA_YARLI (Histone H3-like centromeric protein CSE4 OS=Yarrowia lipolytica GN=CSE4 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 9.859e-31 Identity = 75/125 (60.00%), Postives = 91/125 (72.80%), Query Frame = 3 Query: 96 GGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT----DLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 458 GG P Q + TT + KP RY+PG AL+EIR+YQ+ TELLI KLPF R+VRE+A ++ +L++QS A+LALQEAAEA+LV LFED NLCAIHAKRVTIM KD+QLARRIRG Sbjct: 21 GGLHPLGQTRKTLPGERRDTTQKITKP-RYKPGQKALKEIRRYQRGTELLIAKLPFARVVREVALNYLGSEYGNLQWQSMALLALQEAAEAFLVHLFEDVNLCAIHAKRVTIMQKDMQLARRIRG 144
BLAST of CB290429 vs. ExPASy Swiss-Prot
Match: CENPA_YEAST (Histone H3-like centromeric protein CSE4 OS=Saccharomyces cerevisiae GN=CSE4 PE=1 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 5.410e-29 Identity = 64/97 (65.98%), Postives = 80/97 (82.47%), Query Frame = 3 Query: 180 RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT---DLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 461 +Y P +AL EIRKYQ+ST+LLI K+PF RLV+E+ +F T DLR+QS A++ALQEA+EAYLVGL E TNL A+HAKR+TIM KD+QLARRIRG+ Sbjct: 131 KYTPSELALYEIRKYQRSTDLLISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMKKDMQLARRIRGQ 227
BLAST of CB290429 vs. ExPASy Swiss-Prot
Match: CENPA_KLULA (Histone H3-like centromeric protein CSE4 OS=Kluyveromyces lactis GN=CSE4 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.056e-28 Identity = 63/97 (64.95%), Postives = 80/97 (82.47%), Query Frame = 3 Query: 180 RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTD---LRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 461 RY+P +AL EIRKYQ+ST+LLI ++PF RLV+E+ F T+ LR+QS A++ALQEA+EAYLVGL E TNL A+HAKR+TIM KD+QLARRIRG+ Sbjct: 86 RYKPTDLALAEIRKYQRSTDLLISRMPFARLVKEVTDQFTTESEPLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMRKDMQLARRIRGQ 182
BLAST of CB290429 vs. ExPASy Swiss-Prot
Match: CENPA_XENTR (Histone H3-like centromeric protein A OS=Xenopus tropicalis GN=cenpa PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.685e-28 Identity = 74/138 (53.62%), Postives = 92/138 (66.67%), Query Frame = 3 Query: 54 RVMARTKQTARKSTGG-KAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF--QSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 458 RV T+ +S G AP ++ A +A K R+RPGT AL EIRKYQKSTELLIRK PF RLVRE+ + L + QS A++ALQEA+EA+LV LFED+ LC++HAKRVT+ +DIQLARRIRG Sbjct: 18 RVSPPLPTTSTRSPGRPSAPEQRKAPRATPKK-----------RFRPGTRALMEIRKYQKSTELLIRKAPFSRLVREVCMTYACGLNYSWQSMALMALQEASEAFLVRLFEDSYLCSLHAKRVTLYVQDIQLARRIRG 144
BLAST of CB290429 vs. ExPASy Swiss-Prot
Match: CENPA_KLUMA (Histone H3-like centromeric protein CSE4 OS=Kluyveromyces marxianus GN=CSE4 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.685e-28 Identity = 62/97 (63.92%), Postives = 80/97 (82.47%), Query Frame = 3 Query: 180 RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTD---LRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 461 +Y+P +AL EIRKYQ+ST+LLI ++PF RLV+E+ F +D LR+QS A++ALQEA+EAYLVGL E TNL A+HAKR+TIM KD+QLARRIRG+ Sbjct: 94 KYKPSDLALAEIRKYQRSTDLLISRMPFARLVKEVTDQFASDEEPLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMRKDMQLARRIRGQ 190
BLAST of CB290429 vs. ExPASy Swiss-Prot
Match: CENPA_XENLA (Histone H3-like centromeric protein A OS=Xenopus laevis GN=cenpa PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.580e-28 Identity = 71/124 (57.26%), Postives = 88/124 (70.97%), Query Frame = 3 Query: 93 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF--QSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 458 T + P Q +A+R S KK R+RPGT AL EIRKYQKSTELLIRK PF RLVRE+ + + + QS A++ALQEA+EA+LV LFED+ LC++HAKRVT+ +DIQLARRIRG Sbjct: 29 TSPRRPHAQQQRRASRASP------KK--RFRPGTRALMEIRKYQKSTELLIRKAPFSRLVREVCMTYACGMNYNWQSMALMALQEASEAFLVRLFEDSYLCSLHAKRVTLYVQDIQLARRIRG 144
BLAST of CB290429 vs. ExPASy Swiss-Prot
Match: CENPA_CANGA (Histone H3-like centromeric protein CSE4 OS=Candida glabrata GN=CSE4 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.740e-27 Identity = 61/101 (60.40%), Postives = 80/101 (79.21%), Query Frame = 3 Query: 168 KKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF---KTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 461 K+ + P +A+ EI KYQ+ST LLI+K+PF +LV+E+ ++F DLR+QS A+LALQEA+EAYLVGL E TNL A+HAKR+TIM KD+QLARRIRG+ Sbjct: 138 KEKRNFAPSKLAMYEIEKYQRSTALLIQKIPFAKLVKEVTEEFAGESQDLRWQSMAILALQEASEAYLVGLLEHTNLLALHAKRITIMKKDMQLARRIRGQ 238
BLAST of CB290429 vs. ExPASy Swiss-Prot
Match: CENPA_SACSE (Histone H3-like centromeric protein CSE4 OS=Saccharomyces servazzii GN=CSE4 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.877e-27 Identity = 62/101 (61.39%), Postives = 79/101 (78.22%), Query Frame = 3 Query: 168 KKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTD---LRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 461 K RYRP +AL EIRKYQ+ST+LLI K+PF RLV+E+ +F + L++ S A+LALQEA+EAYLVGL E NL A+HAKR+T+M KD+QLARRIRG+ Sbjct: 191 KTATRYRPSDLALYEIRKYQQSTDLLISKIPFARLVKEVTDNFILENQHLQWHSMAILALQEASEAYLVGLLEHANLLALHAKRITLMKKDVQLARRIRGQ 291 The following BLAST results are available for this feature:
BLAST of CB290429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290429 ID=CB290429; Name=CB290429; organism=Citrus sinensis; type=EST; length=622bpback to top |