CB290461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU1_ALKMQ (Elongation factor Tu 1 OS=Alkaliphilus metalliredigens (strain QYMF) GN=tuf1 PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.743e-62 Identity = 120/181 (66.30%), Postives = 142/181 (78.45%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKET-RNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG +KV E + LVGL E R VTGVEMF+K LD+ AGDNVG+LLRG+Q+ +I+RG VLAK G+I PHTKF+A VYVLKKEEGGRH+PFF GYRPQF RT DVTG + E +MVMPGD + M +ELI P+A E+G+RFAIREGG+TVGAGV+ SIIE Sbjct: 222 SITGRGTVATGRIERGIVKVQEEISLVGLSEAPRKLVVTGVEMFRKLLDQGQAGDNVGILLRGIQRDEIERGQVLAKTGSIQPHTKFMAEVYVLKKEEGGRHTPFFDGYRPQFYFRTTDVTGSIKL-----PEGVEMVMPGDNITMEIELISPIATEEGLRFAIREGGRTVGAGVVASIIE 397
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_STAES (Elongation factor Tu OS=Staphylococcus epidermidis (strain ATCC 12228) GN=tuf PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.583e-62 Identity = 120/180 (66.67%), Postives = 140/180 (77.78%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGRVERG IKVGE V+++G+ ET TVTGVEMF+K LD A AGDN+G LLRGV + D+QRG VLA PG+ITPHTKF A VYVL K+EGGRH+PFF YRPQF RT DVTG V+ E ++MVMPGD V+M VELI P+A E G RF+IREGG+TVG+GV+ I E Sbjct: 220 SITGRGTVATGRVERGQIKVGEEVEIIGMHETSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITPHTKFKAEVYVLSKDEGGRHTPFFTNYRPQFYFRTTDVTGVVNL-----PEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIFE 394
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_STAEQ (Elongation factor Tu OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=tuf PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.583e-62 Identity = 120/180 (66.67%), Postives = 140/180 (77.78%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGRVERG IKVGE V+++G+ ET TVTGVEMF+K LD A AGDN+G LLRGV + D+QRG VLA PG+ITPHTKF A VYVL K+EGGRH+PFF YRPQF RT DVTG V+ E ++MVMPGD V+M VELI P+A E G RF+IREGG+TVG+GV+ I E Sbjct: 220 SITGRGTVATGRVERGQIKVGEEVEIIGMHETSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITPHTKFKAEVYVLSKDEGGRHTPFFTNYRPQFYFRTTDVTGVVNL-----PEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIFE 394
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CHLP8 (Elongation factor Tu OS=Chlorobaculum parvum (strain NCIB 8327) GN=tuf PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.583e-62 Identity = 118/180 (65.56%), Postives = 140/180 (77.78%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGR+ERG IKVG V++VG+K T VTG+EMFQKTLDE AGDN GLLLRGV K ++RGMV+AKPG+ITPHTKF A VY+LKKEEGGRH+PFF GYRPQF RT DVTG V+ E +MVMPGD + + VELI P+A E+ +RFAIREGG+TVGAG + I+E Sbjct: 219 SISGRGTVGTGRIERGIIKVGNEVEIVGIKPTTKSVVTGIEMFQKTLDEGQAGDNAGLLLRGVDKEALERGMVIAKPGSITPHTKFKAEVYILKKEEGGRHTPFFNGYRPQFYFRTTDVTGSVTL-----PEGVEMVMPGDNLSVDVELIAPIAMEESLRFAIREGGRTVGAGSVTKIVE 393
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CALS8 (Elongation factor Tu OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=tuf PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.583e-62 Identity = 121/181 (66.85%), Postives = 141/181 (77.90%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLK-ETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTV TGRVERGT+K GE V++VG E R VTG+EMF+K LDEA+AGDNVG LLRG+QK +++RG VLAKPGTI PHTKF A VYVL KEEGGRH+PFF GYRPQF RT DVTG ++ E +M MPGD V+M VELI P+A E G+RFAIREGG+TVGAG + +IIE Sbjct: 225 SITGRGTVVTGRVERGTLKTGEEVEIVGFAPEPRKTVVTGIEMFRKVLDEAVAGDNVGCLLRGIQKNEVERGQVLAKPGTIKPHTKFKAQVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGTITL-----PEGVEMCMPGDNVEMTVELISPIAIESGLRFAIREGGRTVGAGSVTTIIE 400
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_ANATD (Elongation factor Tu OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=tuf PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.583e-62 Identity = 121/181 (66.85%), Postives = 141/181 (77.90%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLK-ETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTV TGRVERGT+K GE V++VG E R VTG+EMF+K LDEA+AGDNVG LLRG+QK +++RG VLAKPGTI PHTKF A VYVL KEEGGRH+PFF GYRPQF RT DVTG ++ E +M MPGD V+M VELI P+A E G+RFAIREGG+TVGAG + +IIE Sbjct: 225 SITGRGTVVTGRVERGTLKTGEEVEIVGFAPEPRKTVVTGIEMFRKVLDEAVAGDNVGCLLRGIQKNEVERGQVLAKPGTIKPHTKFKAQVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGTITL-----PEGVEMCMPGDNVEMTVELISPIAIESGLRFAIREGGRTVGAGSVTTIIE 400
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU1_MYXXD (Elongation factor Tu 1 OS=Myxococcus xanthus (strain DK 1622) GN=tuf1 PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.583e-62 Identity = 118/180 (65.56%), Postives = 143/180 (79.44%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTVATGRVERG IKVGE V++VGL+ T+ VTGVEMF+K LD+ MAGDN+G L+RG+++ D++RG VLAKPG+ITPHTKF A +YVL KEEGGRH+PFF GYRPQF RT DVTG V E +MVMPGD + + VELI PVA E+ +RFA+REGG+TVGAGV+ IIE Sbjct: 222 SISGRGTVATGRVERGIIKVGEEVEVVGLRPTQKTVVTGVEMFRKLLDQGMAGDNIGALVRGLKREDMERGQVLAKPGSITPHTKFKAQIYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGSVKL-----PENVEMVMPGDNIAIEVELITPVAMEKELRFAVREGGRTVGAGVVAEIIE 396
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_STIHE (Elongation factor Tu, chloroplastic OS=Stigeoclonium helveticum GN=tufA PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 4.680e-62 Identity = 121/189 (64.02%), Postives = 147/189 (77.78%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRV---SFIMNDKDEE------SKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGRVERGT+KV ETV+++GL++T+ TVT +EMFQKTLDE +AGDNVG+LLRGVQK DI+RGMV+AKPGTI PHT F VYVL EEGGR S FF GY+PQF +RT DVTG++ S+I E + MV PGD V M ++LI P+A E+GMRFAIREGG+TVGAG++ I+E Sbjct: 230 SITGRGTVATGRVERGTLKVNETVEIIGLRDTKTTTVTAIEMFQKTLDETIAGDNVGILLRGVQKKDIERGMVIAKPGTILPHTLFEGQVYVLTAEEGGRKSGFFKGYQPQFYVRTTDVTGKILDFSYIKQRNPSELSTMHSNPMVCPGDYVNMKIQLITPIAIEKGMRFAIREGGRTVGAGMVLEILE 418
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU2_MYXXD (Elongation factor Tu 2 OS=Myxococcus xanthus (strain DK 1622) GN=tuf2 PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 4.680e-62 Identity = 117/180 (65.00%), Postives = 143/180 (79.44%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTVATGRVERG IKVGE V++VGL+ T+ VTGVEMF+K LD+ MAGDN+G L+RG+++ D++RG VLAKPG+ITPHTKF A +YVL KEEGGRH+PFF GYRPQF RT DVTG V E +MVMPGD + + VELI PVA E+ +RFA+REGG+TVGAGV+ I+E Sbjct: 222 SISGRGTVATGRVERGIIKVGEEVEVVGLRPTQKTVVTGVEMFRKLLDQGMAGDNIGALVRGLKREDMERGQVLAKPGSITPHTKFKAQIYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGSVKL-----PENVEMVMPGDNIAIEVELITPVAMEKELRFAVREGGRTVGAGVVAEIVE 396
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_PROVI (Elongation factor Tu OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=tuf PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.112e-62 Identity = 116/178 (65.17%), Postives = 139/178 (78.09%), Query Frame = -3 Query: 165 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 698 SI+GRGTV TGR+ERG IK+ E V++VG+++TR VTG+EMFQK LDE AGDN GLLLRGV K D++RGMV+AKPGTI PHTKF A VY+LKKEEGGRH+PFF YRPQF RT DVTG VS E +MVMPGD + + VELI P+A ++G+RFAIREGG+TVGAG + I Sbjct: 219 SISGRGTVGTGRIERGRIKINEEVEIVGIRDTRKSVVTGIEMFQKLLDEGQAGDNAGLLLRGVDKNDLERGMVIAKPGTIKPHTKFKAEVYILKKEEGGRHTPFFTNYRPQFYFRTTDVTGAVSL-----PEGVEMVMPGDNLSVEVELIAPIAMDEGLRFAIREGGRTVGAGSVTKI 391 The following BLAST results are available for this feature:
BLAST of CB290461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290461 ID=CB290461; Name=CB290461; organism=Citrus sinensis; type=EST; length=700bpback to top |