CB290461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_PELLD (Elongation factor Tu OS=Pelodictyon luteolum (strain DSM 273) GN=tuf PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.112e-62 Identity = 116/180 (64.44%), Postives = 140/180 (77.78%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGR+ERG IK+ E V++VG+K+TR VTG+EMFQK LDE AGDN GLLLRGV K +++RGMV+AKPGTI PHTKF A VY+LKKEEGGRH+PFF YRPQF RT DVTG V+ E +MVMPGD + + VELI P+A ++G+RFAIREGG+TVGAG + I E Sbjct: 219 SISGRGTVGTGRIERGRIKINEEVEIVGIKDTRKSVVTGIEMFQKLLDEGQAGDNAGLLLRGVDKTELERGMVIAKPGTIKPHTKFKAEVYILKKEEGGRHTPFFTNYRPQFYFRTTDVTGAVTL-----PEGVEMVMPGDNLSVDVELIAPIAMDEGLRFAIREGGRTVGAGSVTKISE 393
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_NITOC (Elongation factor Tu OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=tuf1 PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.112e-62 Identity = 113/180 (62.78%), Postives = 142/180 (78.89%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGRVERG +KVGE +++VG++ET+ TGVEMF+K LDE AGDNVG+LLRG ++ D++RG VLAKP +ITPHTKF A VYVL K+EGGRH+PFF GYRPQF RT DVTG + D + +MVMPGD ++M V LI P+A E+G+RFA+REGG+TVGAGV+ +IE Sbjct: 222 SISGRGTVVTGRVERGIVKVGEEIEIVGMRETQKTICTGVEMFRKLLDEGRAGDNVGVLLRGTKREDVERGQVLAKPKSITPHTKFYAEVYVLSKDEGGRHTPFFTGYRPQFYFRTTDVTGAI-----DLPDGVEMVMPGDNIQMTVSLIAPIAMEEGLRFAVREGGRTVGAGVVSKVIE 396
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_NITMU (Elongation factor Tu OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=tuf1 PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.112e-62 Identity = 116/180 (64.44%), Postives = 140/180 (77.78%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGRVERG IKVGE +++VGLK T TGVEMF+K LD+ AGDNVG+LLRG ++ +++RG VLAKPGTITPHTKF A +YVL KEEGGRH+PFF GYRPQF RT DVTG + + ++MVMPGD V + V LI P+A E+G+RFAIREGG+TVGAGV+ IIE Sbjct: 222 SISGRGTVVTGRVERGVIKVGEDIEIVGLKPTTKTVCTGVEMFRKLLDQGQAGDNVGVLLRGTKREEVERGQVLAKPGTITPHTKFTAEIYVLSKEEGGRHTPFFQGYRPQFYFRTTDVTGAI-----ELPAGTEMVMPGDNVSVTVNLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CHLPD (Elongation factor Tu OS=Chlorobium phaeobacteroides (strain DSM 266) GN=tuf PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.112e-62 Identity = 116/180 (64.44%), Postives = 141/180 (78.33%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGR+ERG IK+ E V++VG+K TR VTG+EMFQK LDE AGDN GLLLRGV K +++RGMV+AKPGTI PHTKF A VY+L+KEEGGRH+PFF GYRPQF RT DVTG V+ E +MVMPGD + + VELI+P+A ++ +RFAIREGG+TVGAG + IIE Sbjct: 219 SISGRGTVGTGRIERGRIKINEEVEIVGIKPTRKSVVTGIEMFQKLLDEGQAGDNAGLLLRGVDKTELERGMVIAKPGTIKPHTKFKAEVYILRKEEGGRHTPFFNGYRPQFYFRTTDVTGSVTL-----PEGVEMVMPGDNLSVDVELIVPIAMDENLRFAIREGGRTVGAGSVTKIIE 393
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_BAUCH (Elongation factor Tu OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=tuf PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.112e-62 Identity = 112/180 (62.22%), Postives = 143/180 (79.44%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGRVERG +KVGE V+++G+K T T TGVEMF+K LDE AG+N+G+LLRGV++ D++RG VLAKPG+I PHTKF + VY+L K+EGGRH+PFF GYRPQF RT DVTG + + + +MVMPGD +KM+V LI P+A +QG+RFAIREGG+TVGAG++ IIE Sbjct: 220 SISGRGTVVTGRVERGILKVGEEVEIIGIKNTTKTTCTGVEMFRKLLDEGRAGENIGVLLRGVKRDDVERGQVLAKPGSIKPHTKFASEVYILNKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPI-----DVEMVMPGDNIKMIVNLIAPIAMDQGLRFAIREGGRTVGAGIVTDIIE 394
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_BACCN (Elongation factor Tu OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=tuf PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.112e-62 Identity = 121/181 (66.85%), Postives = 144/181 (79.56%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGL-KETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGRVERG +KVG+ V+++GL +ET + TVTGVEMF+K LD+A AGDN+G LLRGV + DIQRG VLAKPG++ H KF A VYVL KEEGGRH+PFFA YRPQF RT DVTG + E ++MVMPGD V+M VELI PVA E+G +F+IREGG+TVGAGV+ SIIE Sbjct: 220 SITGRGTVATGRVERGVVKVGDVVEIIGLAEETASTTVTGVEMFRKLLDQAEAGDNIGALLRGVAREDIQRGQVLAKPGSVKAHAKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGIIQL-----PEGTEMVMPGDNVEMTVELIAPVAVEEGTKFSIREGGRTVGAGVVASIIE 395
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_AERHH (Elongation factor Tu OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=tuf1 PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.112e-62 Identity = 116/179 (64.80%), Postives = 140/179 (78.21%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI GRGTV TGRVERG +KVGE V++VG+K+T T TGVEMF+K LDE AG+N+G LLRGV++ D++RG VLAKPGTI PHTKF + VYVL KEEGGRH+PFF GYRPQF RT DVTG + + E +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+ +I Sbjct: 220 SIAGRGTVVTGRVERGIVKVGEEVEIVGIKDTTKTTCTGVEMFRKLLDEGRAGENIGALLRGVKREDVERGQVLAKPGTIKPHTKFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIAPIAMDDGLRFAIREGGRTVGAGVVAKVI 393
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_SHIFL (Elongation factor Tu OS=Shigella flexneri GN=tufA PE=1 SV=3) HSP 1 Score: 236.884 bits (603), Expect = 7.982e-62 Identity = 115/179 (64.25%), Postives = 143/179 (79.89%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGRVERG IKVGE V++VG+KET+ T TGVEMF+K LDE AG+NVG+LLRG+++ +I+RG VLAKPGTI PHTKF + VY+L K+EGGRH+PFF GYRPQF RT DVTG + + E +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+ ++ Sbjct: 220 SISGRGTVVTGRVERGIIKVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_SHIDS (Elongation factor Tu OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=tuf1 PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 7.982e-62 Identity = 115/179 (64.25%), Postives = 143/179 (79.89%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGRVERG IKVGE V++VG+KET+ T TGVEMF+K LDE AG+NVG+LLRG+++ +I+RG VLAKPGTI PHTKF + VY+L K+EGGRH+PFF GYRPQF RT DVTG + + E +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+ ++ Sbjct: 220 SISGRGTVVTGRVERGIIKVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_SHIBS (Elongation factor Tu OS=Shigella boydii serotype 4 (strain Sb227) GN=tuf1 PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 7.982e-62 Identity = 115/179 (64.25%), Postives = 143/179 (79.89%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGRVERG IKVGE V++VG+KET+ T TGVEMF+K LDE AG+NVG+LLRG+++ +I+RG VLAKPGTI PHTKF + VY+L K+EGGRH+PFF GYRPQF RT DVTG + + E +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+ ++ Sbjct: 220 SISGRGTVVTGRVERGIIKVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393 The following BLAST results are available for this feature:
BLAST of CB290461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290461 ID=CB290461; Name=CB290461; organism=Citrus sinensis; type=EST; length=700bpback to top |