CB290461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CYACA (Elongation factor Tu, chloroplastic OS=Cyanidium caldarium GN=tufA PE=3 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 3.819e-72 Identity = 132/180 (73.33%), Postives = 153/180 (85.00%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG IKVGETV++VGLK T + TVTG+EMFQKTLDE +AGDNVG+LLRGVQK DI+RGMVLAKPG+ITPH KF A VYVL KEEGGRH+PFF GYRPQF +RT DVTG +S D ++MV+PGDR+KM VELI PVA EQGMRFAIREGG+TVGAG++ I++ Sbjct: 231 SITGRGTVATGRIERGAIKVGETVEIVGLKSTASTTVTGLEMFQKTLDEGLAGDNVGVLLRGVQKQDIERGMVLAKPGSITPHDKFEAEVYVLNKEEGGRHTPFFPGYRPQFYVRTTDVTGNISQFTTDDGGSAEMVLPGDRIKMTVELIHPVAIEQGMRFAIREGGRTVGAGIVSKILD 410
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_NEPOL (Elongation factor Tu, chloroplastic OS=Nephroselmis olivacea GN=tufA PE=3 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 8.508e-72 Identity = 131/179 (73.18%), Postives = 155/179 (86.59%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SITGRGTVATGRVERG++K+G+T+++VGLK TR TVTG+EMFQKTLD+++AGDNVG+LLRG+QK DIQRGMVLA P TITPHTKF + VYVL KEEGGRH+PFF GYRPQF +RT DVTG++ D E+ MVMPGDRVKMVVELI P+A E+GMRFAIREGG+TVGAGV+ +II Sbjct: 231 SITGRGTVATGRVERGSVKLGDTIEIVGLKPTRETTVTGLEMFQKTLDQSVAGDNVGILLRGIQKEDIQRGMVLAAPRTITPHTKFESQVYVLTKEEGGRHTPFFPGYRPQFYVRTTDVTGKIDSFRADDGGEATMVMPGDRVKMVVELIQPIAIEKGMRFAIREGGRTVGAGVVSNII 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_SYNP2 (Elongation factor Tu OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=tuf PE=3 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.111e-71 Identity = 129/180 (71.67%), Postives = 153/180 (85.00%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG +KVGET+++VG+++TR+ TVTGVEMFQKTLDE MAGDNVG+LLRGVQK DI+RGMVLAKPG+ITPHT F A VYVL KEEGGRH+PFF YRPQF +RT DVTG +S D ++MVMPGDR+KM VELI P+A EQGMRFAIREGG+T+GAG + I++ Sbjct: 230 SITGRGTVATGRIERGRVKVGETIEIVGIRDTRSTTVTGVEMFQKTLDEGMAGDNVGVLLRGVQKDDIERGMVLAKPGSITPHTNFEAEVYVLTKEEGGRHTPFFPNYRPQFYVRTTDVTGTISAFTADDGSSAEMVMPGDRIKMTVELINPIAIEQGMRFAIREGGRTIGAGTVSKILK 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_GUITH (Elongation factor Tu, chloroplastic OS=Guillardia theta GN=tufA PE=3 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.111e-71 Identity = 126/180 (70.00%), Postives = 156/180 (86.67%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG +KVG+T+++VGL+ETRN T+TG+EMFQK+LDEA+AGDNVG+L+RG+QK DI+RGMVLA PG+ITPHTKF VYVL KEEGGRH+PFF+GYRPQF +RT DVTG ++ +D ++MVMPGDR+KM +LI P+A E+GMRFAIREGG+TVGAGV+ IIE Sbjct: 229 SITGRGTVATGRIERGKVKVGDTIEIVGLRETRNTTITGLEMFQKSLDEALAGDNVGILVRGIQKTDIERGMVLAAPGSITPHTKFEGEVYVLTKEEGGRHTPFFSGYRPQFYVRTTDVTGTIAQFTSDDGSTAEMVMPGDRIKMTAQLIHPIAIEKGMRFAIREGGRTVGAGVVSKIIE 408
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_GRATL (Elongation factor Tu, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=tufA PE=3 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 1.451e-71 Identity = 128/180 (71.11%), Postives = 154/180 (85.56%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG IKVG+T+++VGL+ET T+TG+EMFQKTLDE MAGDN+G+LLRGVQK DI+RGMVLA+PGTITPHT+F A VY+L KEEGGRH+PFF+GYRPQF +RT DVTG ++ D ++MVMPGDR+KM ELI P+A EQGMRFAIREGG+TVGAGV+ I+E Sbjct: 230 SITGRGTVATGRIERGIIKVGDTIEIVGLRETTTTTITGLEMFQKTLDEGMAGDNIGILLRGVQKKDIERGMVLAQPGTITPHTQFEAEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGTITQFTADDGSAAEMVMPGDRIKMSAELINPIAIEQGMRFAIREGGRTVGAGVVSKILE 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CYAPA (Elongation factor Tu, cyanelle OS=Cyanophora paradoxa GN=tufA PE=3 SV=2) HSP 1 Score: 269.24 bits (687), Expect = 1.451e-71 Identity = 127/180 (70.56%), Postives = 155/180 (86.11%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG IKVGETV+LVGLK+T++ TVTG+EMFQKTL+E MAGDN+G+LLRGVQK DI+RGMVLAKPG+ITPHT+F + VYVL K+EGGRH+PFF+GYRPQF +RT DVTG + D ++MVMPGDR+KM V L+ P+A EQGMRFAIREGG+T+GAGV+ I++ Sbjct: 230 SITGRGTVATGRIERGAIKVGETVELVGLKDTKSTTVTGLEMFQKTLEEGMAGDNIGILLRGVQKTDIERGMVLAKPGSITPHTQFESEVYVLTKDEGGRHTPFFSGYRPQFYVRTTDVTGSIDAFTADDGSNAEMVMPGDRIKMTVSLVHPIAIEQGMRFAIREGGRTIGAGVVSKILK 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_SYNY3 (Elongation factor Tu OS=Synechocystis sp. (strain PCC 6803) GN=tuf PE=1 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 3.233e-71 Identity = 129/180 (71.67%), Postives = 151/180 (83.89%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG +KVGE + +VG+K+TR TVTGVEMFQKTL+E MAGDNVGLLLRG+QK DI+RGMVLAKPG+ITPHT+F VYVLKKEEGGRH+PFFA YRPQF +RT DVTG + D +MVMPGDR+KM VELI P+A EQGMRFAIREGG+T+GAGV+ I++ Sbjct: 220 SITGRGTVATGRIERGKVKVGEEISIVGIKDTRKATVTGVEMFQKTLEEGMAGDNVGLLLRGIQKEDIERGMVLAKPGSITPHTEFEGEVYVLKKEEGGRHTPFFANYRPQFYVRTTDVTGTIKSYTADDGSAVEMVMPGDRIKMTVELINPIAIEQGMRFAIREGGRTIGAGVVSKILK 399
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_PROM5 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9515) GN=tuf PE=3 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 5.515e-71 Identity = 131/180 (72.78%), Postives = 152/180 (84.44%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG +KVGE V++VG+++TR TVTGVEMF+K LDE MAGDNVGLLLRGVQK DI+RGMVL K G+ITPHTKF VYVLKKEEGGRH+PFFAGYRPQF +RT DVTG+++ +D +MVMPGDR+KM ELI PVA EQGMRFAIREGG+T+GAGV+ IIE Sbjct: 220 SITGRGTVATGRIERGKVKVGEEVEIVGIRDTRLTTVTGVEMFRKLLDEGMAGDNVGLLLRGVQKEDIERGMVLVKKGSITPHTKFEGEVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTSDDGANVEMVMPGDRIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKIIE 399
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_PROM4 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9211) GN=tuf PE=3 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 9.407e-71 Identity = 132/180 (73.33%), Postives = 151/180 (83.89%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG IKVGE V++VG+K+TR TVTGVEMF+K LDE MAGDNVGLLLRGVQK DI+RGMVL K G+ITPHTKF VYVLKKEEGGRH+PFFAGYRPQF +RT DVTG+++ D +MVMPGDR+KM ELI PVA EQGMRFAIREGG+T+GAGV+ II+ Sbjct: 220 SITGRGTVATGRIERGKIKVGEEVEIVGIKDTRVTTVTGVEMFRKLLDEGMAGDNVGLLLRGVQKEDIERGMVLVKKGSITPHTKFEGEVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTADDGSNVEMVMPGDRIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKIIK 399
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_PORYE (Elongation factor Tu, chloroplastic OS=Porphyra yezoensis GN=tufA PE=3 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 9.407e-71 Identity = 126/180 (70.00%), Postives = 154/180 (85.56%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG IKVG+T+++VGL+ETR T+TG+EMFQKTL+E +AGDN+G+LLRGVQK DI+RGMVLAKPGTITPHT+F A VY+L KEEGGRH+PFF GYRPQF +RT DVTG ++ D +++MVMPGDR+KM ELI +A EQGMRFAIREGG+TVGAGV+ I++ Sbjct: 230 SITGRGTVATGRIERGIIKVGDTIEIVGLRETRTTTITGLEMFQKTLEEGLAGDNIGILLRGVQKKDIERGMVLAKPGTITPHTQFEAEVYILTKEEGGRHTPFFPGYRPQFYVRTTDVTGTINQFTADDGTDAEMVMPGDRIKMTAELINAIAIEQGMRFAIREGGRTVGAGVVSKILK 409 The following BLAST results are available for this feature:
BLAST of CB290461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290461 ID=CB290461; Name=CB290461; organism=Citrus sinensis; type=EST; length=700bpback to top |