CB290461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_POLSJ (Elongation factor Tu OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=tuf1 PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.664e-59 Identity = 111/179 (62.01%), Postives = 137/179 (76.54%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGRVERG IKVGE +++VG+ +T+ T TGVEMF+K LD+ AGDNVG+LLRG ++ D+QRG VL KPG+I PHT F +YVL K+EGGRH+PFF YRPQF RT DVTG + + E +MVMPGD V + V+LI P+A E+G+RFAIREGGKTVGAGV+ II Sbjct: 222 SISGRGTVVTGRVERGVIKVGEEIEIVGIADTQKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREDVQRGQVLCKPGSIKPHTHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGAI-----ELPEGKEMVMPGDNVSITVKLINPIAMEEGLRFAIREGGKTVGAGVVAKII 395
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_HELAH (Elongation factor Tu OS=Helicobacter acinonychis (strain Sheeba) GN=tuf PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.664e-59 Identity = 112/180 (62.22%), Postives = 140/180 (77.78%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI GRGTV TGR+ERG +KVG+ V++VG++ T+ TVTGVEMF+K LD+ AGDNVG+LLRG +K +++RGMVL KPG+ITPH KF +YVL KEEGGRH+PFF YRPQF +RT DVTG ++ E +MVMPGD VK+ VELI +A E G +FAIREGG+TVGAGV+ +IIE Sbjct: 225 SIAGRGTVVTGRIERGMVKVGDEVEIVGIRATQKTTVTGVEMFRKELDKGEAGDNVGVLLRGTKKEEVERGMVLCKPGSITPHKKFEGEIYVLSKEEGGRHTPFFTNYRPQFYVRTTDVTGSITL-----PEGVEMVMPGDNVKITVELINSIALELGTKFAIREGGRTVGAGVVSNIIE 399
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_GLUDA (Elongation factor Tu OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=tuf PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.664e-59 Identity = 111/178 (62.36%), Postives = 138/178 (77.53%), Query Frame = -3 Query: 165 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 698 SI+GRGTV TGRVERG + VG+ +++VGL+ T+ TVTGVEMF+K LD AGDN+G L+RG ++ D++RG VLAKPG+ITPHTKF A Y+L KEEGGRH+PFF YRPQF RT DVTG V E ++MVMPGD + M VELI P+A ++G+RFAIREGG+TVGAGV+ SI Sbjct: 222 SISGRGTVVTGRVERGVVNVGDEIEIVGLRATQKTTVTGVEMFRKLLDRGEAGDNIGALVRGTKREDVERGQVLAKPGSITPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNIAMDVELIAPIAMDEGLRFAIREGGRTVGAGVVASI 394
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_FRASN (Elongation factor Tu OS=Frankia sp. (strain EAN1pec) GN=tuf PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.664e-59 Identity = 113/181 (62.43%), Postives = 141/181 (77.90%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLK-ETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 +ITGRGTV TGR+ERG +KV ETV++VG+K ET TVTGVEMF+K LDE AGDNVGLLLRG+++ D++RG V+ KP +ITPHT F A VY+L K+EGGRH+PFF YRPQF RT DVTG V+ E ++MVMPGD +M VELI P+A E+G+RFAIREGG+TVGAG + +I+ Sbjct: 222 TITGRGTVVTGRIERGIVKVNETVEIVGIKPETTTTTVTGVEMFRKLLDEGQAGDNVGLLLRGIKREDVERGQVIVKPKSITPHTVFEARVYILNKDEGGRHTPFFKNYRPQFYFRTTDVTGVVTL-----PEGTEMVMPGDNTEMTVELIQPIAMEEGLRFAIREGGRTVGAGQVLKVIK 397
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_FRASC (Elongation factor Tu OS=Frankia sp. (strain CcI3) GN=tuf PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.664e-59 Identity = 113/181 (62.43%), Postives = 142/181 (78.45%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLK-ETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 +ITGRGTV TGRVERG +KV ETV++VG+K ET + TVTGVEMF+K LDE AGDNVGLLLRG+++ D++RG V+ KP +ITPHT F A VY+L K+EGGRH+PFF YRPQF RT DVTG V+ E ++MVMPGD +M VELI P+A E+G+RFAIREGG+TVGAG + +++ Sbjct: 222 TITGRGTVVTGRVERGIVKVNETVEIVGIKPETTSTTVTGVEMFRKLLDEGRAGDNVGLLLRGIKREDVERGQVIVKPKSITPHTVFEARVYILNKDEGGRHTPFFKNYRPQFYFRTTDVTGVVTL-----PEGTEMVMPGDNTEMTVELIQPIAMEEGLRFAIREGGRTVGAGQVTKVLK 397
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CLOB8 (Elongation factor Tu OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=tuf1 PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.664e-59 Identity = 112/181 (61.88%), Postives = 141/181 (77.90%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGL-KETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 +ITGRGTVATGRVE G + VG+ V++VGL +E + VTG+EMF+K LDEA AGDN+G LLRGVQ+ DI+RG VL+KP ++ PHTKF+ VYVLKKEEGGRH+PFF GYRPQF RT DVTG + + +MVMPGD + M VELI P+A ++G+RFAIREGG+TVG+GV+ I+E Sbjct: 222 TITGRGTVATGRVEAGVLHVGDEVEIVGLTEEKKKVVVTGIEMFRKLLDEAQAGDNIGALLRGVQRTDIERGQVLSKPNSVHPHTKFVGQVYVLKKEEGGRHTPFFDGYRPQFYFRTTDVTGSIKL-----PDGMEMVMPGDHIDMNVELITPIAMDEGLRFAIREGGRTVGSGVVTKIVE 397
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_ACIBT (Elongation factor Tu OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=tuf1 PE=3 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 1.664e-59 Identity = 115/178 (64.61%), Postives = 137/178 (76.97%), Query Frame = -3 Query: 165 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 698 SI+GRGTV TGRVE G IKVGE V++VG+K+T TVTGVEMF+K LDE AG+N G+LLRG ++ ++QRG VLAKPGTI PHTKF A VYVL KEEGGRH+PF GYRPQF RT DVTG + E +MVMPGD V+M VELI P+A + G+RFAIREGG+TVGAGV+ + Sbjct: 222 SISGRGTVVTGRVEAGIIKVGEEVEIVGIKDTVKTTVTGVEMFRKLLDEGRAGENCGILLRGTKREEVQRGQVLAKPGTIKPHTKFDAEVYVLSKEEGGRHTPFLNGYRPQFYFRTTDVTGAIQL-----KEGVEMVMPGDNVEMSVELIHPIAMDPGLRFAIREGGRTVGAGVVAKV 394
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_ACIB3 (Elongation factor Tu OS=Acinetobacter baumannii (strain AB307-0294) GN=tuf PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.664e-59 Identity = 115/178 (64.61%), Postives = 137/178 (76.97%), Query Frame = -3 Query: 165 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 698 SI+GRGTV TGRVE G IKVGE V++VG+K+T TVTGVEMF+K LDE AG+N G+LLRG ++ ++QRG VLAKPGTI PHTKF A VYVL KEEGGRH+PF GYRPQF RT DVTG + E +MVMPGD V+M VELI P+A + G+RFAIREGG+TVGAGV+ + Sbjct: 222 SISGRGTVVTGRVEAGIIKVGEEVEIVGIKDTVKTTVTGVEMFRKLLDEGRAGENCGILLRGTKREEVQRGQVLAKPGTIKPHTKFDAEVYVLSKEEGGRHTPFLNGYRPQFYFRTTDVTGAIQL-----KEGVEMVMPGDNVEMSVELIHPIAMDPGLRFAIREGGRTVGAGVVAKV 394
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU2_PELCD (Elongation factor Tu 2 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=tuf2 PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.664e-59 Identity = 113/180 (62.78%), Postives = 140/180 (77.78%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTVATGRVERG + V + +++VG+KET VTGVEMF+K LD+ AGDN+G+LLRGV++ DI+RG VLAKPG+ITPHTKF A Y+L KEEGGRH+PFF GYRPQF RT DVTG + + E ++MVMPGD M V LI P+A ++ +RFAIREGG+TVGAGV+ IIE Sbjct: 225 SISGRGTVATGRVERGIVCVQDEIEIVGMKETTKTVVTGVEMFRKLLDQGQAGDNIGVLLRGVKREDIERGQVLAKPGSITPHTKFKAEAYILTKEEGGRHTPFFNGYRPQFYFRTTDVTG-----ICELAEGTEMVMPGDNASMTVNLITPIAMDKELRFAIREGGRTVGAGVVSDIIE 399
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU2_CAUSK (Elongation factor Tu 2 OS=Caulobacter sp. (strain K31) GN=tuf2 PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.664e-59 Identity = 108/180 (60.00%), Postives = 139/180 (77.22%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGR+E+G +KVGE V++VG++ + T TGVEMF+K LD+ AGDNVG+LLRG ++ D++RG VL KPG+ITPHTKF+A Y+L KEEGGRH+PFF YRPQF RT DVTG + E +M+MPGD ++ VELI P+A +QG+RFAIREGG+TVGAGV+ I+E Sbjct: 222 SISGRGTVVTGRIEKGVVKVGEEVEIVGIRAVQKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLCKPGSITPHTKFVAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGIIKL-----REGVEMIMPGDNAELDVELITPIAMDQGLRFAIREGGRTVGAGVVAKIVE 396 The following BLAST results are available for this feature:
BLAST of CB290461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290461 ID=CB290461; Name=CB290461; organism=Citrus sinensis; type=EST; length=700bpback to top |