CB290461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU1_SHEB9 (Elongation factor Tu 1 OS=Shewanella baltica (strain OS195) GN=tuf1 PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.174e-59 Identity = 112/179 (62.57%), Postives = 139/179 (77.65%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGRVERG +KVG+ V++VG++ T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VLAKPG+I PHT F + VYVL KEEGGRH+PFF GYRPQF RT DVTG + + E +MVMPGD +KMVV LI P+A ++G+RFAIREGG+TVGAGV+ II Sbjct: 220 SISGRGTVVTGRVERGIVKVGDEVEIVGVRTTTKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLAKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLICPIAMDEGLRFAIREGGRTVGAGVVAKII 393
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU1_SHEB5 (Elongation factor Tu 1 OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=tuf1 PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.174e-59 Identity = 112/179 (62.57%), Postives = 139/179 (77.65%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGRVERG +KVG+ V++VG++ T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VLAKPG+I PHT F + VYVL KEEGGRH+PFF GYRPQF RT DVTG + + E +MVMPGD +KMVV LI P+A ++G+RFAIREGG+TVGAGV+ II Sbjct: 220 SISGRGTVVTGRVERGIVKVGDEVEIVGVRTTTKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLAKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLICPIAMDEGLRFAIREGGRTVGAGVVAKII 393
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU1_SERP5 (Elongation factor Tu 1 OS=Serratia proteamaculans (strain 568) GN=tuf1 PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.174e-59 Identity = 112/179 (62.57%), Postives = 140/179 (78.21%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGRVERG +KVGE V++VG+K+T T TGVEMF+K LDE AG+NVG+LLRG+++ DI+RG VLAKPG+I PHT+F + VY+L K+EGGRH+PFF GYRPQF RT DVTG + + E +MVMPGD V M V LI P+A + G+RFAIREGG+TVGAGV+ +I Sbjct: 220 SISGRGTVVTGRVERGIVKVGEEVEIVGIKDTVKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREDIERGQVLAKPGSIKPHTQFDSEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNVNMKVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVI 393
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_SPHAL (Elongation factor Tu OS=Sphingopyxis alaskensis GN=tuf PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.839e-59 Identity = 109/178 (61.24%), Postives = 141/178 (79.21%), Query Frame = -3 Query: 165 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 698 SI+GRGTV TGRVE G +KVGE V++VG+K+T+ VTGVEMF+K LD+ AGDN+G L+RGV + +++RG VLAKPG+ITPHT+F + VYVL K+EGGRH+PFFA YRPQF RT DVTG V E ++MVMPGD V++ V+LI P+A + G+RFAIREGG+TVGAGV+ ++ Sbjct: 223 SISGRGTVVTGRVETGVVKVGEEVEIVGIKDTKKTVVTGVEMFRKLLDQGQAGDNIGALIRGVGREEVERGQVLAKPGSITPHTEFTSEVYVLSKDEGGRHTPFFANYRPQFYFRTTDVTGEVIL-----PEGTEMVMPGDNVQLSVKLIAPIAMDPGLRFAIREGGRTVGAGVVATV 395
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_SILST (Elongation factor Tu OS=Silicibacter sp. (strain TM1040) GN=tuf1 PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.839e-59 Identity = 110/179 (61.45%), Postives = 136/179 (75.98%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGRVERG I VG+ +++VG+K+T T TGVEMF+K LD AGDN+G LLRG+ + ++RG VL KPG++TPHTKF A Y+L KEEGGRH+PFFA YRPQF RT DVTG V+ E ++MVMPGD +K VELI P+A E G+RFAIREGG+TVGAGV+ I+ Sbjct: 217 SISGRGTVVTGRVERGVINVGDNIEIVGIKDTTTTTCTGVEMFRKLLDRGEAGDNIGALLRGIDREAVERGQVLCKPGSVTPHTKFEAEAYILTKEEGGRHTPFFANYRPQFYFRTTDVTGTVTL-----PEGTEMVMPGDNLKFEVELIAPIAMEDGLRFAIREGGRTVGAGVVSKIL 390
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_SACD2 (Elongation factor Tu OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=tuf1 PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.839e-59 Identity = 110/179 (61.45%), Postives = 140/179 (78.21%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGRVERG +KVGE +++VG+++T T TGVEMF+K LDE AG+NVG+LLRG ++ D++RG VL+KPG++TPHT F + +YVL K+EGGRH+PFF GYRPQF RT DVTG + E +MVMPGD V+M V LI P+A E+G+RFAIREGG+TVGAGV+ II Sbjct: 233 SISGRGTVVTGRVERGIVKVGEELEIVGIRDTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDDVERGQVLSKPGSVTPHTTFQSEIYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGAC-----ELPEGVEMVMPGDNVQMTVTLIAPIAMEEGLRFAIREGGRTVGAGVVAKII 406
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_RHOPB (Elongation factor Tu OS=Rhodopseudomonas palustris (strain BisB18) GN=tuf PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.839e-59 Identity = 110/180 (61.11%), Postives = 139/180 (77.22%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGRVERG +KVGE +++VGL++T+ VTGVEMF+K LD+ AGDN+G LLRG ++ +++RG VL KPG++ PHTKF A Y+L KEEGGRH+PFF YRPQF RT DVTG V E ++MVMPGD + M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE Sbjct: 222 SISGRGTVVTGRVERGIVKVGEEIEIVGLRDTQKTIVTGVEMFRKLLDQGQAGDNIGALLRGTKREEVERGQVLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_PSYCK (Elongation factor Tu OS=Psychrobacter cryohalolentis (strain K5) GN=tuf1 PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.839e-59 Identity = 109/179 (60.89%), Postives = 142/179 (79.33%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGRVE G ++VG+ +++VG+++T+ T TGVEMF+K LDE AG+N G+LLRG ++ D+QRG VLAKPG+ITPHTKF A VYVL KEEGGRH+PF GYRPQF RT DVTG + + ++MVMPGD V+M VELI P+A ++G+RFAIREGG+TVGAGV+ +++ Sbjct: 222 SISGRGTVVTGRVESGIVRVGDEIEIVGIRDTQKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKREDVQRGQVLAKPGSITPHTKFDAEVYVLSKEEGGRHTPFLNGYRPQFYFRTTDVTGAIQL-----QDGTEMVMPGDNVEMGVELIHPIAMDKGLRFAIREGGRTVGAGVVANVL 395
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_POLSQ (Elongation factor Tu OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=tuf1 PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.839e-59 Identity = 110/179 (61.45%), Postives = 140/179 (78.21%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGR+ERG +KVGE ++++G+K T T TGVEMF+K LD+ AGDNVG+LLRG ++ +++RG VLAKPG+ITPHT F A VY+L K+EGGRH+PFF YRPQF RT DVTG + KD+E MVMPGD V + V+LI P+A E+G+RFAIREGG+TVGAGV+ I+ Sbjct: 222 SISGRGTVVTGRIERGIVKVGEEIEIIGIKPTLKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREEVERGQVLAKPGSITPHTHFTAEVYILGKDEGGRHTPFFNNYRPQFYFRTTDVTGSIEL---PKDKE--MVMPGDNVTITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIL 395
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_NITHX (Elongation factor Tu OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=tuf PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.839e-59 Identity = 111/180 (61.67%), Postives = 138/180 (76.67%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGRVERG +KVGE +++VG++ T+ TVTGVEMF+K LD+ AGDN+G LLRG ++ D++RG VL KPG++ PHTKF A Y+L KEEGGRH+PFF YRPQF RT DVTG V ++MVMPGD V M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE Sbjct: 222 SISGRGTVVTGRVERGIVKVGEEIEIVGIRPTQKTTVTGVEMFRKLLDQGQAGDNIGALLRGTKREDVERGQVLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHL-----PAGTEMVMPGDNVAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396 The following BLAST results are available for this feature:
BLAST of CB290461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290461 ID=CB290461; Name=CB290461; organism=Citrus sinensis; type=EST; length=700bpback to top |