CB290461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU2_WOLTR (Elongation factor Tu 2 OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=tuf2 PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.843e-59 Identity = 107/180 (59.44%), Postives = 143/180 (79.44%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGR+E+G IK+G+ ++++GLK T+ T TGVEMF+K L++ AG NVG+LLRG ++ +++RG VLAKPGTITPH KF A VY+LKKEEGGRH+PFFA Y+PQF +RT DVTG + + E +MVMPGD V + VEL +P+A ++G+RFAIREGG+TVG+GV+ I+E Sbjct: 216 SISGRGTVVTGRIEKGEIKIGDEIEIIGLKATQKTTCTGVEMFKKLLEKGSAGLNVGILLRGTKREEVERGQVLAKPGTITPHRKFKAEVYILKKEEGGRHTPFFANYQPQFYLRTTDVTGSIKLL-----EGKEMVMPGDNVSIEVELQVPIAMDKGLRFAIREGGRTVGSGVVSEILE 390
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU2_NITEC (Elongation factor Tu 2 OS=Nitrosomonas eutropha (strain C91) GN=tuf2 PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.843e-59 Identity = 110/180 (61.11%), Postives = 138/180 (76.67%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGRVERG +KVG+ +++VGL+ T T TGVEMF+K LD+ AGDNVG+LLRG ++ +++RG VLAKPG+I PHTKF A +YVL KEEGGRH+PFFAGYRPQF RT DVTG + + +MVMPGD + + V LI P+A G+RFAIREGG+TVGAGV+ +IE Sbjct: 222 SISGRGTVVTGRVERGIVKVGDEIEIVGLRPTIKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREEVERGQVLAKPGSILPHTKFSAEIYVLSKEEGGRHTPFFAGYRPQFYFRTTDVTGSI-----ELPAGVEMVMPGDNISVNVNLIAPIAMSDGLRFAIREGGRTVGAGVVAKVIE 396
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU1_WOLTR (Elongation factor Tu 1 OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=tuf1 PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.843e-59 Identity = 107/180 (59.44%), Postives = 143/180 (79.44%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGR+E+G IK+G+ ++++GLK T+ T TGVEMF+K L++ AG NVG+LLRG ++ +++RG VLAKPGTITPH KF A VY+LKKEEGGRH+PFFA Y+PQF +RT DVTG + + E +MVMPGD V + VEL +P+A ++G+RFAIREGG+TVG+GV+ I+E Sbjct: 223 SISGRGTVVTGRIEKGEIKIGDEIEIIGLKATQKTTCTGVEMFKKLLEKGSAGLNVGILLRGTKREEVERGQVLAKPGTITPHRKFKAEVYILKKEEGGRHTPFFANYQPQFYLRTTDVTGSIKLL-----EGKEMVMPGDNVSIEVELQVPIAMDKGLRFAIREGGRTVGSGVVSEILE 397
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_SYNFM (Elongation factor Tu OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=tuf1 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.325e-59 Identity = 115/180 (63.89%), Postives = 138/180 (76.67%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGRVERG I+V E V++VG + T TGVEMF+KTLD+ AGDNVG+LLRG ++ +++RG V+AKPG+ITPHTKF A VYVLKKEEGGRH+PFF GYRPQF RT DVTG ++ E +MVMPGD + V LI PVA E+ +RFAIREGG+TVGAGVI IIE Sbjct: 223 SISGRGTVVTGRVERGVIRVSEDVEIVGFRPTFKTVCTGVEMFRKTLDQGQAGDNVGVLLRGTKRDEVERGQVVAKPGSITPHTKFKAEVYVLKKEEGGRHTPFFPGYRPQFYFRTTDVTGIMTL-----PEGVEMVMPGDNISTEVHLITPVALEKELRFAIREGGRTVGAGVITEIIE 397
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_SHEHH (Elongation factor Tu OS=Shewanella halifaxensis (strain HAW-EB4) GN=tuf1 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.325e-59 Identity = 109/179 (60.89%), Postives = 138/179 (77.09%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI GRGTV TGRVERG ++VG+ V++VG+K+T T TGVEMF+K LDE AG+N G+LLRG+++ D++RG VLA PG+ITPHT F + +YVL KEEGGRH+PFF GYRPQF RT DVTG + + E +MVMPGD V M V LI P+A ++G+RFAIREGG+TVGAGV+ I+ Sbjct: 220 SIAGRGTVVTGRVERGIVRVGDEVEIVGIKDTTKSTCTGVEMFRKLLDEGRAGENCGVLLRGIKREDVERGQVLAAPGSITPHTTFKSEIYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNVAMTVTLIAPIAMDEGLRFAIREGGRTVGAGVVAEIV 393
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_ROSDO (Elongation factor Tu OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=tuf1 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.325e-59 Identity = 110/180 (61.11%), Postives = 136/180 (75.56%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGRVERG I VG+ +++VG+K+T++ T TGVEMF+K LD AGDN+G LLRG+ + ++RG VL KPG++ PHTKF A Y+L K+EGGRH+PFFA YRPQF RT DVTG V E ++MVMPGD V VELI P+A EQG+RFAIREGG+TVGAGV+ I E Sbjct: 217 SISGRGTVVTGRVERGVINVGDNIEIVGIKDTQSTTCTGVEMFRKLLDRGEAGDNIGALLRGIDREAVERGQVLCKPGSVKPHTKFEAEAYILTKDEGGRHTPFFANYRPQFYFRTTDVTGTVQLA-----EGTEMVMPGDNVSFGVELIAPIAMEQGLRFAIREGGRTVGAGVVSKITE 391
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_RHIRD (Elongation factor Tu OS=Rhizobium radiobacter GN=tufA PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.325e-59 Identity = 109/180 (60.56%), Postives = 139/180 (77.22%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGRVERG +KVGE V++VG++ T TVTGVEMF+K LD+ AGDN+G L+RGV + ++RG +L KPG++ PH KF+A Y+L KEEGGRH+PFF YRPQF RT DVTG VS E ++MVMPGD V + VELI+P+A E+ +RFAIREGG+TVGAG++ SI+E Sbjct: 217 SISGRGTVVTGRVERGIVKVGEEVEIVGIRPTSKTTVTGVEMFRKLLDQGQAGDNIGALVRGVTRDGVERGQILCKPGSVKPHKKFMAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGIVSL-----PEGTEMVMPGDNVTVEVELIVPIAMEEKLRFAIREGGRTVGAGIVASIVE 391
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_DESRM (Elongation factor Tu OS=Desulfotomaculum reducens (strain MI-1) GN=tuf PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.325e-59 Identity = 118/181 (65.19%), Postives = 139/181 (76.80%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKET-RNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGRVERG +KV + V++VGL E R VTGVEMF+K LD A AGDN+G LLRGV + +I+RG VLAKPG+I PHTK+ A VYVL KEEGGRH+PFF GYRPQF RT DVTG V E +MVMPGD +K+ V+LI P+A E+G+RFAIREGG+TVGAGV+ I E Sbjct: 225 SITGRGTVATGRVERGQVKVQDEVEIVGLNEKPRKTVVTGVEMFRKLLDFAQAGDNIGALLRGVDRKEIERGQVLAKPGSINPHTKYSAEVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGIVQL-----PEGVEMVMPGDNIKVDVDLITPIAIEEGLRFAIREGGRTVGAGVVTGIRE 400
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CAUCR (Elongation factor Tu OS=Caulobacter crescentus GN=tufA PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.325e-59 Identity = 109/180 (60.56%), Postives = 138/180 (76.67%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGRVERG +KVGE V++VG++ + T TGVEMF+K LD+ AGDNVG+LLRG ++ D++RG VL KPG+ITPHTKF+A Y+L KEEGGRH+PFF YRPQF RT DVTG + E +M+MPGD ++ VELI P+A E+ +RFAIREGG+TVGAGV+ I+E Sbjct: 222 SISGRGTVVTGRVERGIVKVGEEVEIVGIRPVQKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLCKPGSITPHTKFVAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGIIKL-----REGVEMIMPGDNAELDVELITPIAMEEKLRFAIREGGRTVGAGVVAKIVE 396
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CAMJR (Elongation factor Tu OS=Campylobacter jejuni (strain RM1221) GN=tuf PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.325e-59 Identity = 109/180 (60.56%), Postives = 142/180 (78.89%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGR+E+G +KVG+T+++VG+K+T+ TVTGVEMF+K +D+ AGDNVG+LLRG +K ++ RGMVLAKP +ITPHT F A VY+L K+EGGRH+PFF YRPQF +RT DVTG + + +MVMPG+ V++ V LI PVA E+G RFAIREGGKTVG+GV+ II+ Sbjct: 225 SISGRGTVVTGRIEKGVVKVGDTIEIVGIKDTQTTTVTGVEMFRKEMDQGEAGDNVGVLLRGTKKEEVIRGMVLAKPKSITPHTDFEAEVYILNKDEGGRHTPFFNNYRPQFYVRTTDVTGSIKLA-----DGVEMVMPGENVRITVSLIAPVALEEGTRFAIREGGKTVGSGVVSKIIK 399 The following BLAST results are available for this feature:
BLAST of CB290461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290461 ID=CB290461; Name=CB290461; organism=Citrus sinensis; type=EST; length=700bpback to top |