CB290461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_BUCAI (Elongation factor Tu OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=tuf PE=3 SV=2) HSP 1 Score: 226.868 bits (577), Expect = 8.260e-59 Identity = 112/179 (62.57%), Postives = 138/179 (77.09%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGRVE+G IKVGE V++VG+K+T T TGVEMF+K LDE AG+NVG+LLRG ++ +I+RG VLAKPG+I PHT F + VYVL KEEGGRH+PFF GYRPQF RT DVTG + + E +MVMPGD +KM V LI P+A G+RFAIREGG+TVGAGV+ ++ Sbjct: 220 SISGRGTVVTGRVEKGIIKVGEEVEIVGIKKTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDEIERGQVLAKPGSIHPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGSI-----ELPEGIEMVMPGDNIKMTVTLINPIAMADGLRFAIREGGRTVGAGVVSKVL 393
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_BUCA5 (Elongation factor Tu OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=tuf PE=3 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 8.260e-59 Identity = 112/179 (62.57%), Postives = 138/179 (77.09%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI+GRGTV TGRVE+G IKVGE V++VG+K+T T TGVEMF+K LDE AG+NVG+LLRG ++ +I+RG VLAKPG+I PHT F + VYVL KEEGGRH+PFF GYRPQF RT DVTG + + E +MVMPGD +KM V LI P+A G+RFAIREGG+TVGAGV+ ++ Sbjct: 220 SISGRGTVVTGRVEKGIIKVGEEVEIVGIKKTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDEIERGQVLAKPGSIHPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGSI-----ELPEGIEMVMPGDNIKMTVTLINPIAMADGLRFAIREGGRTVGAGVVSKVL 393
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU2_PHOPR (Elongation factor Tu 2 OS=Photobacterium profundum GN=tuf2 PE=3 SV=2) HSP 1 Score: 226.868 bits (577), Expect = 8.260e-59 Identity = 109/180 (60.56%), Postives = 139/180 (77.22%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI GRGTV TGRVE+G +++GE V ++G+KET T TGVEMF+K LDE AG+NVG+LLRG ++ D++RG VLAKPG+ITPHT F + +YVL K+EGGRH+PFF GYRPQF RT DVTG + + E +MVMPGD ++M V LI P+A ++G+RFAIREGG+TVGAGV+ I E Sbjct: 220 SIQGRGTVVTGRVEQGIVRIGEEVAIIGIKETTTTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDDVERGQVLAKPGSITPHTTFESEIYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIQMKVTLIAPIAMDEGLRFAIREGGRTVGAGVVAKIFE 394
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_THIDA (Elongation factor Tu OS=Thiobacillus denitrificans (strain ATCC 25259) GN=tuf1 PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.079e-58 Identity = 111/180 (61.67%), Postives = 138/180 (76.67%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGRVERG IKVGE +++VG+ T T TGVEMF+K LD+ AGDNVG+LLRG ++ ++QRG VLAKPG+I PHTKF A +YVL K+EGGRH+PFF GYRPQF RT DVTG + + ++MVMPGD V + V LI P+A ++G+RFAIREGG+TVGAGV+ I E Sbjct: 222 SISGRGTVVTGRVERGVIKVGEEIEIVGITPTVKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREEVQRGQVLAKPGSIKPHTKFSAEIYVLSKDEGGRHTPFFNGYRPQFYFRTTDVTGSI-----ELPAGTEMVMPGDNVSIKVSLIQPIAMDEGLRFAIREGGRTVGAGVVAKIEE 396
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_SULNB (Elongation factor Tu OS=Sulfurovum sp. (strain NBC37-1) GN=tuf PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.079e-58 Identity = 112/179 (62.57%), Postives = 140/179 (78.21%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 +I GRGTV TG+V+RG + VG+ V++VGLK+T+ TVTGVEMF+K +D +AGDN G+L+RG+ K +QRGMVL KPG+ITPHT+F A VYVL KEEGGRH+PFF YRPQF +RT DVTG V E ++MVMPGD VK+ VELI P+A ++G RFAIREGG+TVGAGV+ II Sbjct: 228 TIQGRGTVVTGKVDRGQVCVGDEVEIVGLKDTQKTTVTGVEMFRKEMDCGIAGDNCGVLIRGIDKEAVQRGMVLCKPGSITPHTQFEAEVYVLTKEEGGRHTPFFDNYRPQFYVRTTDVTGSVKL-----QEGTEMVMPGDNVKINVELIAPIALDEGTRFAIREGGRTVGAGVVSKII 401
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_STIAU (Elongation factor Tu OS=Stigmatella aurantiaca GN=tuf PE=3 SV=2) HSP 1 Score: 226.483 bits (576), Expect = 1.079e-58 Identity = 114/179 (63.69%), Postives = 137/179 (76.54%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SI GRGTVATGRVERG IKVGE V++VG++ T+ +TGVEMF+K LDE MAGDN+G LLRG+++ D++RG VLA G+I PHTKF A VYVL KEEGGRH+PFF GYRPQF RT DVTG V + +MVMPGD + + VELI PVA E+ + FAIREGG+TVGAGV+ II Sbjct: 222 SIAGRGTVATGRVERGKIKVGEEVEIVGIRPTQKTVITGVEMFRKLLDEGMAGDNIGALLRGLKREDLERGQVLANWGSINPHTKFKAQVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTVKL-----PDNVEMVMPGDNIAIEVELITPVAMEKELPFAIREGGRTVGAGVVADII 395
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_RHIL3 (Elongation factor Tu OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=tuf1 PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.079e-58 Identity = 108/180 (60.00%), Postives = 139/180 (77.22%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGRVERG +KVGE V++VG++ T TVTGVEMF+K LD+ AGDN+G L+RGV + ++RG +L KPG++ PH KF+A Y+L KEEGGRH+PFF YRPQF RT DVTG V+ E ++MVMPGD V + VELI+P+A E+ +RFAIREGG+TVGAG++ SI+E Sbjct: 217 SISGRGTVVTGRVERGIVKVGEEVEIVGIRPTTKTTVTGVEMFRKLLDQGQAGDNIGALIRGVTRDGVERGQILCKPGSVKPHKKFMAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGIVTL-----PEGTEMVMPGDNVTVSVELIVPIAMEEKLRFAIREGGRTVGAGIVASIVE 391
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_RALME (Elongation factor Tu OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=tuf1 PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.079e-58 Identity = 107/180 (59.44%), Postives = 138/180 (76.67%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGR+ERG IKVGE +++VG++ T T TGVEMF+K LD+ AGDNVGLLLRG ++ D++RG VL KPG+I PHT F VY+L K+EGGRH+PFF YRPQF RT DVTG + + ++ +MVMPGD V + V+LI P+A E+G+RFAIREGG+TVGAGV+ I++ Sbjct: 222 SISGRGTVVTGRIERGVIKVGEEIEIVGIRPTVKTTCTGVEMFRKLLDQGQAGDNVGLLLRGTKREDVERGQVLCKPGSIKPHTHFTGEVYILSKDEGGRHTPFFNNYRPQFYFRTTDVTGSI-----ELPQDKEMVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKILD 396
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_PSEF5 (Elongation factor Tu OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=tuf1 PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.079e-58 Identity = 110/180 (61.11%), Postives = 137/180 (76.11%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTV TGRVERG +++ E V++VGL++T+ T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VL KPGT+ PHTKF A VYVL KEEGGRH+PFF GYRPQF RT DVTG + E +MVMPGD ++M V LI +A E G+RFAIREGG+TVGAGV+ +IE Sbjct: 223 SISGRGTVVTGRVERGIVRIQEEVEIVGLRDTQKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLVKPGTVKPHTKFTAEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGNC-----ELPEGVEMVMPGDNIQMTVTLIKTIAMEDGLRFAIREGGRTVGAGVVAKVIE 397
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_BORHD (Elongation factor Tu OS=Borrelia hermsii (strain DAH) GN=tuf PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.079e-58 Identity = 114/180 (63.33%), Postives = 138/180 (76.67%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTVATGR+ERG IKVG+ V++VG++ETR TVTGVEMFQK L++ AGDNVGLLLRGV K D++RG V+A GTITPH KF A +Y L KEEGGRH PFF+GYRPQF RT DVTG VS E +MVMPGD V +VVELI +A ++ + FA+REGG+TV +G I I+E Sbjct: 221 SISGRGTVATGRIERGIIKVGQEVEIVGIRETRKTTVTGVEMFQKILEQGEAGDNVGLLLRGVDKKDVERGQVIAAIGTITPHKKFKASIYCLTKEEGGRHKPFFSGYRPQFFFRTTDVTGMVSL------EGKEMVMPGDNVDIVVELISLIAMDKNVEFAVREGGRTVASGRILEILE 394 The following BLAST results are available for this feature:
BLAST of CB290461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290461 ID=CB290461; Name=CB290461; organism=Citrus sinensis; type=EST; length=700bpback to top |