CB290461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_SYNS9 (Elongation factor Tu OS=Synechococcus sp. (strain CC9902) GN=tuf PE=3 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 5.162e-69 Identity = 126/180 (70.00%), Postives = 149/180 (82.78%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG +KVGE V++VG+++ R TVTGVEMF+K LDE MAGDNVGLLLRG+QK DI+RGMVL KPG+ITPHTKF VYVLKKEEGGRH+PFFAGYRPQF +RT DVTG+++ + +MVMPGD ++M ELI PVA E GMRFAIREGG+T+GAGV+ IIE Sbjct: 220 SITGRGTVATGRIERGIVKVGEEVEVVGIRDPRKTTVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVLVKPGSITPHTKFEGQVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTAEDGSNVEMVMPGDNIQMTGELICPVAMEMGMRFAIREGGRTIGAGVVSKIIE 399
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_PROMA (Elongation factor Tu OS=Prochlorococcus marinus GN=tuf PE=3 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 5.162e-69 Identity = 127/180 (70.56%), Postives = 150/180 (83.33%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG + VGE V++VG+++TR TVTGVEMF+K LDE MAGDNVGLLLRG+QK DI+RGMVL K G+ITPHT+F VYVLKKEEGGRH+PFFAGYRPQF +RT DVTG+++ D +MVMPGDR+KM ELI PVA EQGMRFAIREGG+T+GAGV+ II+ Sbjct: 220 SITGRGTVATGRIERGKVTVGEEVEIVGIRDTRLTTVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVLVKKGSITPHTQFEGEVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTADDGSSVEMVMPGDRIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKIIK 399
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CHLAT (Elongation factor Tu, chloroplastic OS=Chlorokybus atmophyticus GN=tufA PE=3 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 6.742e-69 Identity = 126/181 (69.61%), Postives = 153/181 (84.53%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETR-NFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGRVERGT+KVGE +++VGL+E VTG+EMFQKTL+E++AGDNVG+LLRG+QK DI+RGMVLAKPGTI PH F A VY+L KEEGGRH+PFF GYRPQF +RT DVTG++ D E++MVMPGDR+KMVV+LI P+A E+GMRFAIREGG+TVGAGV+ +I+E Sbjct: 230 SITGRGTVATGRVERGTVKVGEAIEIVGLREAPVTSIVTGLEMFQKTLEESVAGDNVGILLRGIQKKDIERGMVLAKPGTIKPHKSFEAQVYILNKEEGGRHTPFFQGYRPQFYVRTTDVTGKIESFQADDGSETQMVMPGDRIKMVVQLIQPIAIEKGMRFAIREGGRTVGAGVVFNILE 410
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_BIGNA (Elongation factor Tu, chloroplastic OS=Bigelowiella natans GN=tufA PE=3 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 6.742e-69 Identity = 123/180 (68.33%), Postives = 156/180 (86.67%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDE-ESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SITGRGTVATGRVERG +K+G+ V++VGL+ETR+ TVTG+EMFQK L E++AGDNVG+LLRG+QKADIQRGMV+A+PG+ITPH F A VY+L KEEGGRH+PFF GYRPQF +RT DVTG++ + +D+D E +MV+PGDRV M VEL+ P+A E+GMRFAIREGG+TVGAGV+ +++ Sbjct: 230 SITGRGTVATGRVERGGVKIGDVVEIVGLRETRSTTVTGLEMFQKMLQESIAGDNVGMLLRGIQKADIQRGMVVAQPGSITPHVSFDAQVYILTKEEGGRHTPFFKGYRPQFYVRTTDVTGKIESLKSDEDNTEMRMVVPGDRVTMSVELVQPIAIEKGMRFAIREGGRTVGAGVVSNVV 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_CYAP8 (Elongation factor Tu OS=Cyanothece sp. (strain PCC 8801) GN=tuf PE=3 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 8.805e-69 Identity = 124/180 (68.89%), Postives = 153/180 (85.00%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SI+GRGTVATGR+ERG +KVGETV++VG++ T + TVTGVEMFQKTL+E +AGDNVGLLLRGV+K DI+RGMV+AKPG+ITPHT+F VYVL KEEGGRH+PFF Y+PQF +RT DVTG + +D+ E +MVMPGDR+KM VELI P+A EQGMRFAIREGG+T+GAGV+ I++ Sbjct: 230 SISGRGTVATGRIERGKVKVGETVEIVGIRATSSTTVTGVEMFQKTLEEGLAGDNVGLLLRGVKKEDIERGMVIAKPGSITPHTQFEGEVYVLTKEEGGRHTPFFKNYKPQFYVRTTDVTGSIVDYTSDEGETVEMVMPGDRIKMTVELINPIAIEQGMRFAIREGGRTIGAGVVSKILK 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_SPIPL (Elongation factor Tu OS=Spirulina platensis GN=tuf PE=3 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 2.562e-68 Identity = 123/179 (68.72%), Postives = 148/179 (82.68%), Query Frame = -3 Query: 162 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 698 SITGRGTV+T +ERG +KVG+TV+L+G+K+TR TVTG EMFQKTL+E MAGDNVGLLLRG+QK D+QRGMV+AKP +ITPHTKF A VY+LKKEEGGRH+PFF GYRPQF +RT DVTG + D +MV+PGDR+ M V+LI P+A EQGMRFAIREGG+TVGAGV+ I+ Sbjct: 231 SITGRGTVSTAGIERGKVKVGDTVELIGIKDTRTTTVTGAEMFQKTLEEGMAGDNVGLLLRGIQKNDVQRGMVIAKPKSITPHTKFEAEVYILKKEEGGRHTPFFKGYRPQFYVRTTDVTGTIDEFTADDGSTPEMVIPGDRINMTVQLICPIAIEQGMRFAIREGGRTVGAGVVAKIL 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_PROMM (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9313) GN=tuf PE=3 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 2.562e-68 Identity = 123/180 (68.33%), Postives = 149/180 (82.78%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG +K GE +++VG++++R TVTGVEMF+K LDE +AGDN GLLLRG++K DI+RGMVL KPG+ITPHTKF VYVLKKEEGGRH+PFFAGYRPQF +RT DVTG+++ + +MVMPGD +KM ELI PVA EQGMRFAIREGG+T+GAGV+ IIE Sbjct: 220 SITGRGTVATGRIERGKVKKGEEIEIVGIRDSRKTTVTGVEMFRKDLDEGLAGDNCGLLLRGIEKEDIERGMVLVKPGSITPHTKFEGQVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTAEDGSNVEMVMPGDNIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKIIE 399
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_MICAN (Elongation factor Tu OS=Microcystis aeruginosa (strain NIES-843) GN=tuf PE=3 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 4.370e-68 Identity = 123/180 (68.33%), Postives = 148/180 (82.22%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG +KVG+ V+LVG++ETR TVTG+EMF+K+LD+ MAGDN G+LLRG+QK DI+RGMV+AKPGTI PHT+F VYVL KEEGGRH+PFF YRPQF +RT DVTG + D +MVMPGDR+KM VELI P+A EQGMRFAIREGG+T+G+GVI II+ Sbjct: 230 SITGRGTVATGRIERGIVKVGDNVELVGIRETRPTTVTGIEMFKKSLDQGMAGDNAGILLRGIQKTDIERGMVIAKPGTIKPHTQFEGEVYVLSKEEGGRHTPFFKNYRPQFYVRTTDVTGTIQDYTADDGSTVEMVMPGDRIKMTVELINPIAIEQGMRFAIREGGRTIGSGVISKIIK 409
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_PROM3 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9303) GN=tuf PE=3 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 5.707e-68 Identity = 122/180 (67.78%), Postives = 149/180 (82.78%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGR+ERG +K GE +++VG++++R TVTGVEMF+K LDE +AGDN GLLLRG++K DI+RGMVL KPG+ITPHTKF VYVLKKEEGGRH+PFFAGYRPQF +RT DVTG+++ + +MVMPGD +KM ELI PVA EQGMRFAIREGG+T+GAGV+ II+ Sbjct: 220 SITGRGTVATGRIERGKVKKGEEIEIVGIRDSRKTTVTGVEMFRKDLDEGLAGDNCGLLLRGIEKEDIERGMVLVKPGSITPHTKFEGQVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTAEDGSNVEMVMPGDNIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKIIQ 399
BLAST of CB290461 vs. ExPASy Swiss-Prot
Match: EFTU_SCEOB (Elongation factor Tu, chloroplastic OS=Scenedesmus obliquus GN=tufA PE=3 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 7.454e-68 Identity = 126/189 (66.67%), Postives = 155/189 (82.01%), Query Frame = -3 Query: 159 SITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFSMRTPDVTGRVSFIMN---------DKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 698 SITGRGTVATGRVERGT+KVGE V+L+GLK+T+ VTG+EMF+KTLDE MAGDNVG+LLRG+QK D++RGMVLAKPG+ITPHTKF A VYVL KEEGGRHSPF GY+PQF +RT DVTG++ + ++ +KM MPGDR+++ V+LI PVA E+GMRFAIREGG+TVGAGV+ +I+E Sbjct: 230 SITGRGTVATGRVERGTLKVGENVELIGLKDTKATVVTGLEMFKKTLDETMAGDNVGVLLRGIQKKDVERGMVLAKPGSITPHTKFEAQVYVLTKEEGGRHSPFLVGYQPQFFIRTTDVTGKIVSFTHIQMKNPSSVAEEHSNKMAMPGDRIEVTVQLIYPVAVEKGMRFAIREGGRTVGAGVVTNILE 418 The following BLAST results are available for this feature:
BLAST of CB290461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290461 ID=CB290461; Name=CB290461; organism=Citrus sinensis; type=EST; length=700bpback to top |