CB290471
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290471 vs. ExPASy Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.960e-12 Identity = 36/121 (29.75%), Postives = 64/121 (52.89%), Query Frame = 3 Query: 114 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM-PTNPNGAL 467 A+KRI +E+ ++Q +P + P+ +++F WQ I GP D+ ++GG++ + P +YPFKPP T + + ICL I W P+ +V L+++ + + NP+ L Sbjct: 2 ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR---SQWSPALTVSKVLLSICSLLCDPNPDDPL 119
BLAST of CB290471 vs. ExPASy Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.960e-12 Identity = 36/121 (29.75%), Postives = 64/121 (52.89%), Query Frame = 3 Query: 114 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM-PTNPNGAL 467 A+KRI +E+ ++Q +P + P+ +++F WQ I GP D+ ++GG++ + P +YPFKPP T + + ICL I W P+ +V L+++ + + NP+ L Sbjct: 2 ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR---SQWSPALTVSKVLLSICSLLCDPNPDDPL 119
BLAST of CB290471 vs. ExPASy Swiss-Prot
Match: UB2D1_BOVIN (Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.960e-12 Identity = 36/121 (29.75%), Postives = 64/121 (52.89%), Query Frame = 3 Query: 114 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM-PTNPNGAL 467 A+KRI +E+ ++Q +P + P+ +++F WQ I GP D+ ++GG++ + P +YPFKPP T + + ICL I W P+ +V L+++ + + NP+ L Sbjct: 2 ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR---SQWSPALTVSKVLLSICSLLCDPNPDDPL 119
BLAST of CB290471 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.091e-12 Identity = 37/119 (31.09%), Postives = 64/119 (53.78%), Query Frame = 3 Query: 114 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 458 A+KRI +E+ ++ +P + P+ +++F WQ I GP D+ + GG++ I P +YPFKPP T PN + ICL I + W P+ ++ L+++ + + T+PN Sbjct: 2 ALKRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPN--INSNGSICLDILR---DQWSPALTISKVLLSICSLL-TDPN 114
BLAST of CB290471 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.091e-12 Identity = 44/146 (30.14%), Postives = 79/146 (54.11%), Query Frame = 3 Query: 120 KRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM-PTNPNGALG---SLDYKKEERRALAIKSREAAPKF 539 KRI++E++ + +P ++ P E+N+ ++ + GP + +EGG +H + LP EYP PP+ LT + + +ICLS + W P+ +RT L+++ A M NP+ L + +K+ E +A+A +RE K+ Sbjct: 5 KRIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLK---KDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIA-NAREWTKKY 146
BLAST of CB290471 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.187e-11 Identity = 39/113 (34.51%), Postives = 61/113 (53.98%), Query Frame = 3 Query: 123 RILQEVKEMQSNP--SDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM 443 R+ +E KE+Q D + + NIF+W I+GP +T +EGG++ +P YP +PP LT PN F+T +ICL I + W P+W++++ A+IA M Sbjct: 7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKT-GEICLDILKN---AWSPAWTLQSVCRAIIALM 115
BLAST of CB290471 vs. ExPASy Swiss-Prot
Match: UB2G2_PONAB (Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.187e-11 Identity = 44/139 (31.65%), Postives = 70/139 (50.36%), Query Frame = 3 Query: 114 AVKRILQEVKEMQSNPSDDFMSLPL-EENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFML--------LTPNGRFETQTKICLSISNHHP-----------EHWQPSWSVRTALVALIAFM--PTNPNGA 464 A+KR++ E K++ NP + ++ P+ EEN FEW+ I GP DT FE G++ + P +YP PP + P+GR +C+SI H P E W P SV L+++++ + P + +GA Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGR------VCISIL-HAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGA 136
BLAST of CB290471 vs. ExPASy Swiss-Prot
Match: UB2G2_MOUSE (Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus GN=Ube2g2 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.187e-11 Identity = 44/139 (31.65%), Postives = 70/139 (50.36%), Query Frame = 3 Query: 114 AVKRILQEVKEMQSNPSDDFMSLPL-EENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFML--------LTPNGRFETQTKICLSISNHHP-----------EHWQPSWSVRTALVALIAFM--PTNPNGA 464 A+KR++ E K++ NP + ++ P+ EEN FEW+ I GP DT FE G++ + P +YP PP + P+GR +C+SI H P E W P SV L+++++ + P + +GA Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGR------VCISIL-HAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGA 136
BLAST of CB290471 vs. ExPASy Swiss-Prot
Match: UB2G2_HUMAN (Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens GN=UBE2G2 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.187e-11 Identity = 44/139 (31.65%), Postives = 70/139 (50.36%), Query Frame = 3 Query: 114 AVKRILQEVKEMQSNPSDDFMSLPL-EENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFML--------LTPNGRFETQTKICLSISNHHP-----------EHWQPSWSVRTALVALIAFM--PTNPNGA 464 A+KR++ E K++ NP + ++ P+ EEN FEW+ I GP DT FE G++ + P +YP PP + P+GR +C+SI H P E W P SV L+++++ + P + +GA Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGR------VCISIL-HAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGA 136
BLAST of CB290471 vs. ExPASy Swiss-Prot
Match: UB2G2_BOVIN (Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.187e-11 Identity = 44/139 (31.65%), Postives = 70/139 (50.36%), Query Frame = 3 Query: 114 AVKRILQEVKEMQSNPSDDFMSLPL-EENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFML--------LTPNGRFETQTKICLSISNHHP-----------EHWQPSWSVRTALVALIAFM--PTNPNGA 464 A+KR++ E K++ NP + ++ P+ EEN FEW+ I GP DT FE G++ + P +YP PP + P+GR +C+SI H P E W P SV L+++++ + P + +GA Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGR------VCISIL-HAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGA 136 The following BLAST results are available for this feature:
BLAST of CB290471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290471 ID=CB290471; Name=CB290471; organism=Citrus sinensis; type=EST; length=781bpback to top |