CB290473
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290473 vs. ExPASy Swiss-Prot
Match: SERA_PIG (D-3-phosphoglycerate dehydrogenase OS=Sus scrofa GN=PHGDH PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.834e-26 Identity = 70/169 (41.42%), Postives = 93/169 (55.03%), Query Frame = 1 Query: 223 VLIAEKLGQAGLDLLNEFA-NVDCAYNLSPEELCTKISLCDALIGRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDP 726 VLI++ L ++L + V NLS EEL ++ C+ LI RS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW+R K++G L GK L +LG G++G EVA R + GM I +DP Sbjct: 9 VLISDSLDPCCREILQDGGLQVVEKQNLSKEELIAELQDCEGLIVRSATKVTSDVI-NAAKKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMILCLARQIPQATASMKDGKWERKKFMGTELNGKVLGILGLGRIGREVATRMQSFGMKTIGYDP 176
BLAST of CB290473 vs. ExPASy Swiss-Prot
Match: SERA_MOUSE (D-3-phosphoglycerate dehydrogenase OS=Mus musculus GN=Phgdh PE=1 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 5.834e-26 Identity = 64/143 (44.76%), Postives = 82/143 (57.34%), Query Frame = 1 Query: 298 NLSPEELCTKISLCDALIGRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDP 726 NLS EEL ++ C+ LI RS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW R K++G L GKTL +LG G++G EVA R + GM + +DP Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWDRKKFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTVGYDP 176
BLAST of CB290473 vs. ExPASy Swiss-Prot
Match: SERA_BOVIN (D-3-phosphoglycerate dehydrogenase OS=Bos taurus GN=PHGDH PE=2 SV=3) HSP 1 Score: 116.316 bits (290), Expect = 1.697e-25 Identity = 63/143 (44.06%), Postives = 82/143 (57.34%), Query Frame = 1 Query: 298 NLSPEELCTKISLCDALIGRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDP 726 NLS EEL ++ C+ LI RS TKV D+ ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW+R K++G L GK L +LG G++G EVA R + GM I +DP Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTSDII-NAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQAAASMKDGKWERKKFMGTELNGKVLGILGLGRIGREVATRMQSFGMKTIGYDP 176
BLAST of CB290473 vs. ExPASy Swiss-Prot
Match: SERA_MYCLE (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium leprae GN=serA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.201e-24 Identity = 65/171 (38.01%), Postives = 93/171 (54.39%), Query Frame = 1 Query: 217 PTVLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIGRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPY 729 P VLIA+KL Q+ + L + V +L + DAL+ RS T V+ +V ++A +LK+V RAGVG+DNVD+ AAT G L R +A+ADAS++A W+R+ + G + GKT+ V+G G++G VA R G HVIA+DPY Sbjct: 4 PVVLIADKLAQSTVAALGDQVEVRWVDGPDRTKLLAAVPEADALLVRSATTVDAEVL-AAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIAEADASLRAHIWKRSSFSGTEIFGKTVGVVGLGRIGQLVAARIAAFGAHVIAYDPY 173
BLAST of CB290473 vs. ExPASy Swiss-Prot
Match: SERA_BACSU (D-3-phosphoglycerate dehydrogenase OS=Bacillus subtilis GN=serA PE=3 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 1.589e-23 Identity = 63/170 (37.06%), Postives = 94/170 (55.29%), Query Frame = 1 Query: 223 VLIAEKLGQAGLDLLNEFANVDCAY-NLSPEELCTKISLCDALIGRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPY 729 VL+++K+ GL L E ++ N++ E ++ DAL+ RS TKV D+F LK+VGRAGVG+DN+D+ AT+ G + R++ QA+ SVK+ +W R YVG L GKTL ++G G++GSE+A+RA+ GM V DP+ Sbjct: 4 VLVSDKMSNDGLQPLIESDFIEIVQKNVADAE--DELHTFDALLVRSATKVTEDLFNKMTS-LKIVGRAGVGVDNIDIDEATKHGVIVINAPNGNTISTAEHTFAMISSLMRHIPQANISVKSREWNRTAYVGSELYGKTLGIVGLGRIGSEIAQRARAFGMTVHVFDPF 170
BLAST of CB290473 vs. ExPASy Swiss-Prot
Match: SERA_MYCTU (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium tuberculosis GN=serA PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.111e-22 Identity = 60/171 (35.09%), Postives = 91/171 (53.22%), Query Frame = 1 Query: 217 PTVLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIGRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPY 729 P VLIA+KL + + L + V ++L + DAL+ RS T V+ +V ++A +LK+V RAGVG+DNVD+ AAT G L R + ADAS++ W+R+ + G + GKT+ V+G G++G VA+R G +V+A+DPY Sbjct: 4 PVVLIADKLAPSTVAALGDQVEVRWVDGPDRDKLLAAVPEADALLVRSATTVDAEVL-AAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPY 173
BLAST of CB290473 vs. ExPASy Swiss-Prot
Match: SERA_MYCBO (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium bovis GN=serA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.111e-22 Identity = 60/171 (35.09%), Postives = 91/171 (53.22%), Query Frame = 1 Query: 217 PTVLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIGRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPY 729 P VLIA+KL + + L + V ++L + DAL+ RS T V+ +V ++A +LK+V RAGVG+DNVD+ AAT G L R + ADAS++ W+R+ + G + GKT+ V+G G++G VA+R G +V+A+DPY Sbjct: 4 PVVLIADKLAPSTVAALGDQVEVRWVDGPDRDKLLAAVPEADALLVRSATTVDAEVL-AAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPY 173
BLAST of CB290473 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.907e-19 Identity = 53/177 (29.94%), Postives = 91/177 (51.41%), Query Frame = 1 Query: 214 KPTVLIAEKLGQAGLDLLNEFANVDC---AYNLSPEELCTKISLCDALIGRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRN-------KYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVI 714 KP VLI K+ + G+ +L E V+ + +S E L K+ DAL+ +++ +VF++ A RLK+V VG DN+D+ AT+ G R + +AD V++G+W++ ++G + G+T+ ++GFG++G +ARRAKG GM ++ Sbjct: 2 KPKVLITRKIPENGIKMLREHFEVEVWEDEHEISREVLLEKVRDVDALVTMLSERIDAEVFDA-APRLKIVANYAVGYDNIDIEEATKMGVYITNTPDVLTNATADMAWVLLLATARRLIEADKFVRSGEWKKRGVAWHPLMFLGYDVYGRTIGIVGFGRIGQAIARRAKGFGMRIL 177
BLAST of CB290473 vs. ExPASy Swiss-Prot
Match: GYAR_THEGJ (Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.950e-17 Identity = 53/177 (29.94%), Postives = 87/177 (49.15%), Query Frame = 1 Query: 214 KPTVLIAEKLGQAGLDLLNEFANVDC---AYNLSPEELCTKISLCDALIGRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRN-------KYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVI 714 KP V I + + G+D+L E V+ + E L K+ DAL+ +++ +VF++ A RL++V VG DNVD+ AT G R + +AD+ ++G+W+R ++G + GKT+ ++GFG++G VARRAKG GM ++ Sbjct: 2 KPKVFITRAIPENGIDMLREHFEVEVWPEEREIPREVLLEKVRDVDALVTMLSERIDGEVFDN-APRLRIVANYAVGYDNVDVEEATRRGIYVTNTPDVLTNATADFAWTLLLATARRLIEADSFTRSGEWKRKGIAWHPLMFLGHDVYGKTIGIIGFGRIGQAVARRAKGFGMRIL 177
BLAST of CB290473 vs. ExPASy Swiss-Prot
Match: GYAR_PYRFU (Glyoxylate reductase OS=Pyrococcus furiosus GN=gyaR PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.950e-17 Identity = 52/177 (29.38%), Postives = 88/177 (49.72%), Query Frame = 1 Query: 214 KPTVLIAEKLGQAGLDLLNEFANVDC---AYNLSPEELCTKISLCDALIGRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNK-------YVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVI 714 KP V I + + G+++L E V+ + E+L K+ DAL+ +++++VFE+ A RL++V VG DN+D+ AT G R+V + D V++G+W+R ++G L GKT+ ++GFG++G +ARRAKG M ++ Sbjct: 2 KPKVFITRAIPENGINMLEEEFEVEVWEEEREIPREKLLEKVKDVDALVTMLSERIDQEVFEN-APRLRIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTNATADHAFALLLATARHVVKGDKFVRSGEWKRKGIAWHPKWFLGYELYGKTIGIVGFGRIGQAIARRAKGFNMRIL 177 The following BLAST results are available for this feature:
BLAST of CB290473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290473 ID=CB290473; Name=CB290473; organism=Citrus sinensis; type=EST; length=731bpback to top |