CB290476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290476 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.045e-18 Identity = 57/136 (41.91%), Postives = 71/136 (52.21%), Query Frame = -1 Query: 377 AKMSLIPSIFGNRSVF---------DPFSSDVWAPLGSSSNEVS-TFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXLPENAKIDQVKASMENGVL 754 AK SL+P I ++ DPF P G +E S T + A+VDWKETPE HV D+PGL E+ RVL++SGER E++ K D W RVE LP+N +D VKA MENGVL Sbjct: 26 AKASLLPFIDSPNTLLSDLWSDRFPDPFRVLEQIPYGVEKHEPSITLSHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVL 161
BLAST of CB290476 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.770e-18 Identity = 51/111 (45.95%), Postives = 61/111 (54.95%), Query Frame = -1 Query: 377 DPFSSDVWAPLGSSSNEVSTFAS-AQVDWKETPEAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXLPENAKIDQVKASMENGVL 706 DPF P G +E S S A+VDWKETPE HV D+PGL E+ RVL++SGER E+E K D W RVE LP+N +D VKA +ENGVL Sbjct: 43 DPFRVLEHIPFGVDKDEASMAMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVL 153
BLAST of CB290476 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.770e-18 Identity = 62/133 (46.62%), Postives = 74/133 (55.64%), Query Frame = -1 Query: 377 MSLIPSIFGNRSVFDPFSSDVWA---PLG---SSSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEK--EDKND-KWRRVEXXXXXXXXXXXLPENAKIDQVKASMENGVL 748 MSL+ S GN V DP S D WA P G S + + +VDWKETP AHVF ADLPG+ EDG VL ISGER+ E+ + KND +W VE LP A++DQV ASM+NGVL Sbjct: 1 MSLVRS--GN--VLDPMSVDFWADADPFGAVRSLAERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVL 129
BLAST of CB290476 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.145e-15 Identity = 45/110 (40.91%), Postives = 58/110 (52.73%), Query Frame = -1 Query: 377 DPFSSDVWAPLGSSSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXLPENAKIDQVKASMENGVL 706 DPF PLG + + A+VDWKET E H D+PGL E+ VL++SGER E+E K D+W RVE LP+N ++ VKA +ENGVL Sbjct: 48 DPFKILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVL 157
BLAST of CB290476 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 7.746e-14 Identity = 46/130 (35.38%), Postives = 68/130 (52.31%), Query Frame = -1 Query: 377 AKMSLIPSIFGNRSVFDPFSSDVWAPLGSSSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXEDGRVLQISGER----SVEKEDKNDKWRRVEXXXXXXXXXXXLPENAKIDQVKASMENGVL 754 A+ +P + G + DPF P G ++V+ + A+VDW+ET +AH D+PG+ ED RVL+ISGER + E++ D W R E LP+NA +D + AS++NGVL Sbjct: 38 ARDEAVPEL-GLLAAADPFRILEHVPFGFDRDDVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVL 166
BLAST of CB290476 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.558e-13 Identity = 38/89 (42.70%), Postives = 54/89 (60.67%), Query Frame = -1 Query: 377 ASAQVDWKETPEAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXLPENAKIDQVKASMENGVL 643 ++A +DWKET AHVF AD+PG+ E+ +VL+ISG+R+ E+K ++W RVE LP NA D V A+++NGVL Sbjct: 68 STASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNGVL 156
BLAST of CB290476 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.461e-12 Identity = 40/74 (54.05%), Postives = 47/74 (63.51%), Query Frame = -1 Query: 314 VLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 535 +LQISGER+VEKEDKND W RVE LP+NAK+DQVKASMENGVL K+I+I+G Sbjct: 1 ILQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIEISG 74
BLAST of CB290476 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.469e-12 Identity = 42/123 (34.15%), Postives = 69/123 (56.10%), Query Frame = -1 Query: 377 VFDPFSSDVWAPL---GSS-------SNEVSTFASAQVDWKETPEAHVFKADLP-GLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXLPENAKIDQVKASMENGVL 712 +FD + D W P G++ +++ S FA+ ++ +ET EA+VF+ADLP G+ ++G VL I+GERSV +E+K + +E LP++A +D V+ASM+ G+L Sbjct: 6 LFDTLAFDAWNPFSIFGTTVAADAWLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGGML 128 The following BLAST results are available for this feature:
BLAST of CB290476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290476 ID=CB290476; Name=CB290476; organism=Citrus sinensis; type=EST; length=796bpback to top |