CB290483

Overview
NameCB290483
Unique NameCB290483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290483 vs. ExPASy Swiss-Prot
Match: THI4_SULAC (Putative thiazole biosynthetic enzyme OS=Sulfolobus acidocaldarius GN=Saci_0854 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11
Identity = 44/153 (28.76%), Postives = 77/153 (50.33%), Query Frame = 3
Query:  267 NTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNW 719
            ++ K   I E  +SR + ++ M D + + + D    GAG AG+S AY L+K+  ++  + E+ +S GGG      LF  +V+  PA   L E+ I  ++ +  V I  +A F + + +  +     K+ + V  +D+I +    RV GV   W
Sbjct:    3 DSIKIKAIDEVKISRYIIKQTMEDWMNFVENDVVIVGAGPAGMSAAYYLAKH-GLKTLVFERRLSFGGGIGGGAMLFHKLVIESPADEVLKEMNIRLEKVEDGVYIVDSAEFMAKLAASAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEW 153          
BLAST of CB290483 vs. ExPASy Swiss-Prot
Match: THI4_METTP (Putative thiazole biosynthetic enzyme OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=Mthe_1121 PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.822e-11
Identity = 46/149 (30.87%), Postives = 78/149 (52.35%), Query Frame = 3
Query:  288 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDE-QDSYVVIKHAALFTSTIMSKLLA---RPNVKLFNAVAAEDLIVK-GGRVGGVVTNW 719
            + E  ++R +   Y+   +   D D    GAG A L  A  L++  ++++ + E+ +S GGG W  G +F  +VV+K A   LDE  I Y E ++ Y V       +  +++KL A       +L N V+ ED++++ G R+ G+V NW
Sbjct:    3 LDEVKITRAIVESYLESFLKCTDVDVALVGAGPANLVAAKRLAE-ADVRVVLFEKRLSVGGGLWGGGMMFPRIVVQKEACRILDEYDIWYREFEEGYYVAD-----SIEVVAKLTAGAIDAGAELINLVSVEDVMIREGDRIVGLVINW 145          
BLAST of CB290483 vs. ExPASy Swiss-Prot
Match: THI4_METBU (Putative thiazole biosynthetic enzyme OS=Methanococcoides burtonii (strain DSM 6242) GN=Mbur_2109 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.379e-11
Identity = 41/148 (27.70%), Postives = 73/148 (49.32%), Query Frame = 3
Query:  288 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALV 728
            + E  +SR +   +    + Y D D    G G A L  A  L++   ++  I E+ ++ GGG W  G +F  +VV++ A   LDE GI Y E ++   + ++      ++S   +    ++FN V  ED++++    + G+V NW  V
Sbjct:    3 LDEVTISRAIIEEFSKVFLDYTDVDVALVGGGPANLVAAKYLAE-AGLKTVIYEKKLAVGGGMWAGGMMFPRIVVQEDALHILDEFGISYHEYENGYYVANSIESVGKLISGATS-AGAEIFNLVNVEDVMIRENDEICGLVINWTAV 148          
BLAST of CB290483 vs. ExPASy Swiss-Prot
Match: THI4_SULIM (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=M1425_1670 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.923e-11
Identity = 42/150 (28.00%), Postives = 74/150 (49.33%), Query Frame = 3
Query:  276 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNW 719
            K   ++E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG      LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W
Sbjct:    4 KIKQVEEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEW 151          
BLAST of CB290483 vs. ExPASy Swiss-Prot
Match: THI4_SULSO (Putative thiazole biosynthetic enzyme OS=Sulfolobus solfataricus GN=SSO0436 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11
Identity = 43/150 (28.67%), Postives = 73/150 (48.67%), Query Frame = 3
Query:  276 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNW 719
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG      LF  +++ KPA   L E+ I   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNIRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEW 151          
The following BLAST results are available for this feature:
BLAST of CB290483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
THI4_SULAC1.395e-1128.76Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_METTP1.822e-1130.87Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_METBU2.379e-1127.70Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_SULIM6.923e-1128.00Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULSO9.042e-1128.67Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01bg07_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01bg07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290483 ID=CB290483; Name=CB290483; organism=Citrus sinensis; type=EST; length=733bp
GCACCAGGATCACTGCTGCAAATCAAATTACTTCTCATTATCAACCTTCT
AAGCAGCAGGGGAAGGAGGGGTAAAAAAAAAAAAACATGGCAGCCATGGC
TTCTACAGCTTTCGCTCCTTCAGTTTCGTCTACCACCAATAAGCTCTTTG
ACTCATCCTTTCATGGGGCTCCCATGTCACCTTCTCTTCTACGTCTTCAA
CCCATCAAATCTTCTCGTCCCAACAACTTGTCCATTTCTGCTTCTGCTTC
TCCTCCTTATGACTTGAACACTTTCAAGTTTGACCCCATCAAAGAATCCA
TTGTTTCTCGTGAAATGACGCGCAGGTACATGACGGACATGATCACTTAT
GCTGACACTGATGTGGTAGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTTG
TGCTTATGAGCTCAGCAAAAACCCCAACATTCAGATTGCTATTATCGAAC
AGTCTGTTAGCCCCGGCGGTGGCGCGTGGCTCAGTGGACAGCTCTTCTCT
GCCATGGTTGTGCGCAAACCAGCCCACATCTTCCTTGACGAGCTTGGCAT
CGACTACGATGAGCAAGACAGCTATGTTGTGATCAAGCATGCAGCGCTGT
TCACCTCCACTATAATGAGCAAGCTCCTGGCCCGCCCCAACGTCAAGCTC
TTTAATGCAGTGGCAGCCGAGGACTTGATAGTCAAAGGCGGCAGAGTTGG
TGGTGTGGTGACCAACTGGGCGTTGGTGTCAAT
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