CB290489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290489 vs. ExPASy Swiss-Prot
Match: YSH1_USTMA (Endoribonuclease YSH1 OS=Ustilago maydis GN=YSH1 PE=3 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 1.512e-78 Identity = 138/239 (57.74%), Postives = 180/239 (75.31%), Query Frame = 1 Query: 85 DQLTIIPLGAGNEVGRSCVYMSYRGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFS---GRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDRIEVLDFHQTVEV-NGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALG 789 DQLTI LGAG EVGRSC + YRGKTI+ D G+HPA++G+AALP+ DE+D S +D +LITHFHLDHAA+L Y +EKT F G+V+MTH TKA+Y+ L++D+V++S +D LFDE ++ S +IE +DFHQ V + G++F Y AGHVLGA MF+++IAG+R+LYTGD+SREEDRHL AE+P PD+ I ESTYG Q H+PR +E RFT IH I +GGRVL+P + LG Sbjct: 22 DQLTIEMLGAGQEVGRSCCVLKYRGKTIVCDTGVHPAFTGIAALPFIDELDWSTVDAILITHFHLDHAAALTYIMEKTNFRDGHGKVYMTHPTKAVYRFLMSDFVRISNAGNDDNLFDENEMLASWRQIEAVDFHQDVSIAGGLRFTSYHAGHVLGACMFLIEIAGLRILYTGDFSREEDRHLVQAEIPPVKPDVLICESTYGTQTHEPRLDKEHRFTSQIHHIIKRGGRVLLPVFVLG 260
BLAST of CB290489 vs. ExPASy Swiss-Prot
Match: YSH1_DEBHA (Endoribonuclease YSH1 OS=Debaryomyces hansenii GN=YSH1 PE=3 SV=2) HSP 1 Score: 279.256 bits (713), Expect = 1.730e-74 Identity = 128/251 (51.00%), Postives = 177/251 (70.52%), Query Frame = 1 Query: 85 DQLTIIPLGAGNEVGRSCVYMSYRGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKV----------------SVEDMLFDEQDINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALG 789 D LG NEVGRSC + Y+ K I+ D G+HP G+++LP++DE D S +D+LL++HFHLDHAASLPY ++ T F+GRVFMTHATKAIY+ LL+D+VKV+ + + L+ + D+ RS DRIE +D+H T+E++GI+F Y AGHVLGA M+ ++I G++VL+TGDYS EEDRHL+ AE+P PDI I EST+G H+PR +E R T++IHST+ +GGR+L+P +ALG Sbjct: 12 DDFKFFGLGGCNEVGRSCHIIEYKNKVIMLDAGVHPGLQGLSSLPFYDEYDLSKVDILLVSHFHLDHAASLPYVMQHTNFNGRVFMTHATKAIYRWLLSDFVKVTSIGGGSDARLNNSDPNANTGSSNLYTDDDLMRSFDRIETIDYHSTIELDGIRFTAYHAGHVLGACMYFIEIGGLKVLFTGDYSSEEDRHLQVAEVPPIKPDILITESTFGTATHEPRLEKETRMTNIIHSTLLKGGRILMPVFALG 262
BLAST of CB290489 vs. ExPASy Swiss-Prot
Match: YSH1_CANAL (Endoribonuclease YSH1 OS=Candida albicans GN=YSH1 PE=3 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 1.049e-71 Identity = 129/238 (54.20%), Postives = 175/238 (73.53%), Query Frame = 1 Query: 106 LGAGNEVGRSCVYMSYRGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVS---VED-------MLFDEQDINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALG 789 LG NEVGRSC + Y+ K I+ D G+HPA SG A+ PYFDE D S +D+LLI+HFH+DH+ASLPY ++++ F G+VFMTHATKAIY+ L+ D+V+V+ + ED L+ + DI +S DRIE +D+H T+E++GI+F Y AGHVLGA M+ ++I G++VL+TGDYSREE+RHL AAE+P PDI I EST+G +PR ER+ T IH+TI++GGRVL+P +ALG Sbjct: 105 LGGCNEVGRSCHIIEYKNKVIMLDSGMHPALSGHASFPYFDEYDISKVDILLISHFHVDHSASLPYVMQQSNFRGKVFMTHATKAIYRWLMQDFVRVTSIGNSRSEDGGGGEGSNLYTDDDIMKSFDRIETIDYHSTMEIDGIRFTAYHAGHVLGACMYFIEIGGLKVLFTGDYSREENRHLHAAEVPPLKPDILISESTFGTGTLEPRIELERKLTTHIHATIAKGGRVLLPVFALG 342
BLAST of CB290489 vs. ExPASy Swiss-Prot
Match: YSH1_NEUCR (Endoribonuclease ysh-1 OS=Neurospora crassa GN=ysh-1 PE=3 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 3.732e-69 Identity = 127/239 (53.14%), Postives = 172/239 (71.97%), Query Frame = 1 Query: 85 DQLTIIPLGAGNEVGRSCVYMSYRGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVS---VEDMLFDEQDINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQ-FSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALG 789 D+L + LG GNEVGRSC + Y+GKT++ D G HPAY G+AALP+FD+ D S +DVLLI+HFH+DHAASLPY L KT F GRVFMTHATKAIYK L+ D V+V S +++ E+D ++ IE +D++ T ++ I+ Y AGHVLGAAMF+++IAG+++ +TGDYSREEDRHL +A++P+ D+ I ESTYG+ H PR RE+ I +++GGRVL+P +ALG Sbjct: 22 DELMFLNLGGGNEVGRSCHIIQYKGKTVMLDAGQHPAYDGLAALPFFDDFDLSTVDVLLISHFHIDHAASLPYVLAKTNFRGRVFMTHATKAIYKWLIQDSVRVGNTSSNPQSSLVYTEEDHLKTFPMIEAIDYNTTHTISSIRITPYPAGHVLGAAMFLIEIAGLKIFFTGDYSREEDRHLISAKVPKGVKIDVLITESTYGIASHIPRPEREQALMKSITGILNRGGRVLMPVFALG 260
BLAST of CB290489 vs. ExPASy Swiss-Prot
Match: YSH1_ASPFU (Endoribonuclease ysh1 OS=Aspergillus fumigatus GN=ysh1 PE=3 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.734e-66 Identity = 128/248 (51.61%), Postives = 169/248 (68.15%), Query Frame = 1 Query: 61 DVPVSREGDQLTIIPLGAGNEVGRSCVYMSYRGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVSVED----MLFDEQDINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQ-FSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALG 789 D PV D+L LG GNEVGRSC + Y+GKT++ D G+HPA G +ALP+FDE D S +D+LLI+HFH+DH+++LPY L KT F GRVFMTHATKAIYK L+ D V+VS + L+ E D ++ IE +DF+ T VN I+ + AGHVLGAAMF++ IAG+ +L+TGDYSREEDRHL AE+P+ D+ I EST+G+ + PR RE I +++GGRVL+P +ALG Sbjct: 16 DEPVD-PSDELAFYCLGGGNEVGRSCHIIQYKGKTVMLDAGMHPAKEGFSALPFFDEFDLSTVDILLISHFHVDHSSALPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVSNTASSSDQRTTLYTEHDHLSTLPLIETIDFNTTHTVNSIRITPFPAGHVLGAAMFLISIAGLNILFTGDYSREEDRHLIPAEVPKGIKIDVLITESTFGISTNPPRLEREAALMKSITGILNRGGRVLMPVFALG 262
BLAST of CB290489 vs. ExPASy Swiss-Prot
Match: YSH1_EMENI (Endoribonuclease ysh1 OS=Emericella nidulans GN=ysh1 PE=3 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.124e-65 Identity = 126/248 (50.81%), Postives = 168/248 (67.74%), Query Frame = 1 Query: 61 DVPVSREGDQLTIIPLGAGNEVGRSCVYMSYRGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVSVED----MLFDEQDINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQ-FSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALG 789 D PV D+L LG GNEVGRSC + Y+GKT++ D G+HPA G +ALP+FDE D S +D+LLI+HFH+DH+++LPY L KT F GRVFMTHATKAIYK L+ D V+V+ + L+ E D ++ IE +DF+ T +N I+ Y AGHVLGAAMF++ IAG+ +L+TGDYSREEDRHL A +P+ D+ I EST+G+ + PR RE I +++GGRVL+P +ALG Sbjct: 15 DEPVD-PSDELAFYCLGGGNEVGRSCHIIQYKGKTVMLDAGMHPAKEGFSALPFFDEFDLSTVDILLISHFHVDHSSALPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVNNTASSSDQRTTLYTEHDHLSTLPLIETIDFNTTHTINSIRITPYPAGHVLGAAMFLISIAGLNILFTGDYSREEDRHLIPATVPRGVKIDVLITESTFGISSNPPRLEREAALMKSITGVLNRGGRVLMPVFALG 261
BLAST of CB290489 vs. ExPASy Swiss-Prot
Match: YSH1_CRYNE (Endoribonuclease YSH1 OS=Cryptococcus neoformans GN=YSH1 PE=3 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 4.270e-65 Identity = 121/247 (48.99%), Postives = 170/247 (68.83%), Query Frame = 1 Query: 67 PVSREGDQLTIIPLGAGNEVGRSCVYMSYRGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTF---SGRVFMTHATKAIYKLLLTDYVKVSKVSVEDM--LFDEQDINRSMDRIEVLDFHQTVEV-NGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALG 789 P + LTI LGAG EVGRSC + +RGK I+ D G+HPA G+ ALP+ DE+D S +D +LITHFH+DHAA+LPY +EKT F +G+V+MTHATKAIY L + D V+++ + + L+DE D+ S +D+HQ + + G++F Y AGHVLGA+MF+++IAG+++LYTGDYSREEDRHL AE+P PD+ I EST+GV R +E +FT ++ + + +GGR L+P + G Sbjct: 21 PPDEDAPSLTITMLGAGQEVGRSCCVIEHRGKKIVCDAGLHPAQPGIGALPFIDELDWSTVDAMLITHFHVDHAAALPYIMEKTNFKDGNGKVYMTHATKAIYGLTMMDTVRLNDQNPDTSGRLYDEADVQSSWQSTIAVDYHQDIVIAGGLRFTPYHAGHVLGASMFLIEIAGLKILYTGDYSREEDRHLVMAEIPPVKPDVMICESTFGVHTLPDRKEKEEQFTTLVANIVRRGGRCLMPIPSFG 267
BLAST of CB290489 vs. ExPASy Swiss-Prot
Match: YSH1_GIBZE (Endoribonuclease YSH1 OS=Gibberella zeae GN=YSH1 PE=3 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 2.119e-64 Identity = 128/270 (47.41%), Postives = 170/270 (62.96%), Query Frame = 1 Query: 85 DQLTIIPLGAGNEVGRSCVYMSYRGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITH-------------------------------FHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVS---VEDMLFDEQDINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQ-FSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALG 789 D+L + LG GNEVGRSC + Y+GKT++ D G HPAY G+AALP++D+ D S +DVLLI+H FH+DHAASLPY L KT F GRVFMTH TKAIYK L+ D V+V S ++ EQD + +IE +D+H T ++ I+ Y AGHVLGAAMF+++IAG+ + +TGDYSRE+DRHL +AE+P+ D+ I ESTYG+ H PR RE+ I S +++GGRVL+P +ALG Sbjct: 23 DELMFLCLGGGNEVGRSCHIIQYKGKTVMLDAGQHPAYDGLAALPFYDDFDLSTVDVLLISHPVQDTTALYCHGQYCACVMSISMIMLLIGHSFHIDHAASLPYVLAKTNFRGRVFMTHPTKAIYKWLIQDSVRVGNTSSNPTTQPVYTEQDHLNTFPQIEAIDYHTTHTISSIRITPYPAGHVLGAAMFLIEIAGLNIFFTGDYSREQDRHLVSAEVPKGVKIDVLITESTYGIASHVPRLEREQALMKSITSILNRGGRVLMPVFALG 292
BLAST of CB290489 vs. ExPASy Swiss-Prot
Match: INT11_CHICK (Integrator complex subunit 11 OS=Gallus gallus GN=CPSF3L PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.687e-51 Identity = 102/241 (42.32%), Postives = 145/241 (60.17%), Query Frame = 1 Query: 88 QLTIIPLGAGNEVGRSCVYMSYRGKTILFDCGIHPAYSGMAALPYFDEIDPSA-----IDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVS-KVSVEDMLFDEQDINRSMDRIEVLDFHQTVEVNG-IKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALG 789 ++ + PLGAG +VGRSC+ +S GK ++ DCG+H Y+ P F I + +D ++I+HFHLDH +LPYF E + G ++MTH TKAI +LL DY K++ E F Q I M ++ + HQTV+V+ ++ Y AGHVLGAAMF + + V+YTGDY+ DRHL AA + + PD+ I ESTY + + RER F +H T+ +GG+VLIP +ALG Sbjct: 3 EIKVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGYNDDRRFPDFSYITQNGRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTKAICPILLEDYRKITVDKKGETNFFTSQMIKDCMKKVVAVHLHQTVQVDEELEIKAYYAGHVLGAAMFQIKVGCESVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVFALG 243
BLAST of CB290489 vs. ExPASy Swiss-Prot
Match: INT11_RAT (Integrator complex subunit 11 OS=Rattus norvegicus GN=Cpsf3l PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 5.986e-51 Identity = 101/241 (41.91%), Postives = 145/241 (60.17%), Query Frame = 1 Query: 88 QLTIIPLGAGNEVGRSCVYMSYRGKTILFDCGIHPAYSGMAALPYFDEIDPSA-----IDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVS-KVSVEDMLFDEQDINRSMDRIEVLDFHQTVEVNG-IKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALG 789 ++ + PLGAG +VGRSC+ +S GK ++ DCG+H Y+ P F I S +D ++I+HFHLDH +LPYF E + G ++MTH T+AI +LL DY K++ E F Q I M ++ + HQTV+V+ ++ Y AGHVLGAAMF + + V+YTGDY+ DRHL AA + + P++ I ESTY + + RER F +H T+ +GG+VLIP +ALG Sbjct: 3 EIRVTPLGAGQDVGRSCILVSISGKNVMLDCGMHMGYNDDRRFPDFSYITQSGRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVFALG 243 The following BLAST results are available for this feature:
BLAST of CB290489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290489 ID=CB290489; Name=CB290489; organism=Citrus sinensis; type=EST; length=790bpback to top |