CB290493
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290493 vs. ExPASy Swiss-Prot
Match: HSFA3_ORYSJ (Heat stress transcription factor A-3 OS=Oryza sativa subsp. japonica GN=HSFA3 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.582e-27 Identity = 69/148 (46.62%), Postives = 81/148 (54.73%), Query Frame = 1 Query: 325 PPFLLKTYMLIEDPATDNVISWNGDGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFCNQMFRKGEKDLLCKIRRRKAWANRXXXXXXXXXXXESHDEDQRXXXXXXXXXEYNTLRDENKRLKKENGNLSSE 768 PPFL KTY L+ +P D VISW G FVVW P+ FARD+LP FKH+NFSSFVRQLNTYGFRKV RWEF ++ F + K LL KI RR++ + D E NTLR E L +E L E Sbjct: 66 PPFLSKTYDLVCEPELDGVISWGHAGNSFVVWDPSAFARDVLPHHFKHNNFSSFVRQLNTYGFRKVHADRWEFAHEDFLRHSKHLLKKIVRRRSSPTQQSGLQPGSSGESGLD------------PELNTLRREKSALLQEVTRLKQE 201
BLAST of CB290493 vs. ExPASy Swiss-Prot
Match: HFA6B_ORYSJ (Heat stress transcription factor A-6a OS=Oryza sativa subsp. japonica GN=HSFA6B PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.778e-26 Identity = 57/104 (54.81%), Postives = 70/104 (67.31%), Query Frame = 1 Query: 298 LEYARKSTPPPFLLKTYMLIEDPATDNVISWN--GDGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFCNQMFRKGEKDLLCKIRRRK 603 +E ++ P PF+ KTY ++ D ATD V+SW G G FVVW P A +LP FKH+NFSSFVRQLNTYGFRKV RWEF N+ F G+K LL I+RR+ Sbjct: 83 MEGLGEAGPAPFVAKTYEMVADAATDAVVSWGPGGSGASFVVWDPHALAAGVLPRFFKHANFSSFVRQLNTYGFRKVTPDRWEFANEAFLAGQKHLLKNIKRRR 186
BLAST of CB290493 vs. ExPASy Swiss-Prot
Match: HFC2A_ORYSJ (Heat stress transcription factor C-2a OS=Oryza sativa subsp. japonica GN=HSFC2A PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.718e-25 Identity = 54/93 (58.06%), Postives = 66/93 (70.97%), Query Frame = 1 Query: 328 PFLLKTYMLIEDPATDNVISWNGDGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFCNQMFRKGEKDLLCKIRRRKA 606 PF+ KTY +++DPATD VI+W D FVV P F++ LLP FKHSNFSSFVRQLNTYGFRKV RWEF + F +G+ LL +I RR + Sbjct: 14 PFVAKTYRMVDDPATDGVIAWGRDSNSFVVADPFAFSQTLLPAHFKHSNFSSFVRQLNTYGFRKVDPDRWEFAHVSFLRGQTHLLRRIVRRSS 106
BLAST of CB290493 vs. ExPASy Swiss-Prot
Match: HSFC1_ARATH (Heat stress transcription factor C-1 OS=Arabidopsis thaliana GN=HSFC1 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.468e-25 Identity = 51/92 (55.43%), Postives = 67/92 (72.83%), Query Frame = 1 Query: 328 PFLLKTYMLIEDPATDNVISWNGDGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFCNQMFRKGEKDLLCKIRRRK 603 PF++KTY ++ DP+TD +I+W F+V P +F++ +LP FKH+NFSSFVRQLNTYGFRKV RWEF N+ F +G+K LL I RRK Sbjct: 17 PFIVKTYQMVNDPSTDWLITWGPAHNSFIVVDPLDFSQRILPAYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEHFLRGQKHLLNNIARRK 108
BLAST of CB290493 vs. ExPASy Swiss-Prot
Match: HSFA9_ORYSJ (Heat stress transcription factor A-9 OS=Oryza sativa subsp. japonica GN=HSFA9 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.468e-25 Identity = 69/164 (42.07%), Postives = 87/164 (53.05%), Query Frame = 1 Query: 310 RKSTPPPFLLKTYMLIEDPATDNVISWNGDGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFCNQMFRKGEKDLLCKIRRRKAWANRXXXXXXXXXXXESHDEDQRXXXXXXXXXE------YNTLRDENKRLKKENGNLSSELVSMK 783 + S PFL K Y ++ DPATDNVISW G FV+W F RDL FKHSNF+SF+RQLNTYGFRKV RWE+ N+ F G+K LL I+RRK + ES E Q+ E Y L E + LK++ L +LV ++ Sbjct: 44 KPSEVAPFLTKVYDMVSDPATDNVISWAEGGGSFVIWDSHAFERDL-HRHFKHSNFTSFIRQLNTYGFRKVHPDRWEWANEGFIMGQKHLLKTIKRRKKSSQ------------ESPSEIQKAPVKTAPGTENIEIGKYGGLEKEVETLKRDKALLMQQLVDLR 194
BLAST of CB290493 vs. ExPASy Swiss-Prot
Match: HSFA9_ARATH (Heat stress transcription factor A-9 OS=Arabidopsis thaliana GN=HSFA9 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.838e-24 Identity = 59/157 (37.58%), Postives = 89/157 (56.69%), Query Frame = 1 Query: 328 PFLLKTYMLIEDPATDNVISWNGDGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFCNQMFRKGEKDLLCKIRRRK---AWANRXXXXXXXXXXXESHDEDQRXXXXXXXXXEYNTLRDENKRLKKENGNLSSELVSMKRK 789 PFL KT+ +++D TD V+SW+ F++W EF+ +LLP FKH NFSSF+RQLN+YGF+KV + RWEF N+ F+ G+K LL I+RR N+ ES E+Q + +R E +LK++ ++V+++ K Sbjct: 71 PFLRKTFEIVDDKVTDPVVSWSPTRKSFIIWDSYEFSENLLPKYFKHKNFSSFIRQLNSYGFKKVDSDRWEFANEGFQGGKKHLLKNIKRRSKNTKCCNKEASTTTTETEVESLKEEQ------------SPMRLEMLKLKQQQEESQHQMVTVQEK 215
BLAST of CB290493 vs. ExPASy Swiss-Prot
Match: HFC1A_ORYSJ (Heat stress transcription factor C-1a OS=Oryza sativa subsp. japonica GN=HSFC1A PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 6.322e-24 Identity = 52/92 (56.52%), Postives = 64/92 (69.57%), Query Frame = 1 Query: 328 PFLLKTYMLIEDPATDNVISWNGDGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFCNQMFRKGEKDLLCKIRRRK 603 PF+ KTY ++ DP TD ++ W D FVV PA F++ LLP FKH NFSSFVRQLNTYGFRKV RWEF ++ F +G+ LL +I RRK Sbjct: 26 PFVAKTYQMVCDPRTDALVRWGRDNNSFVVVDPAAFSQLLLPCFFKHGNFSSFVRQLNTYGFRKVHPDRWEFAHESFLRGQTHLLPRIVRRK 117
BLAST of CB290493 vs. ExPASy Swiss-Prot
Match: HFC2B_ORYSJ (Heat stress transcription factor C-2b OS=Oryza sativa subsp. japonica GN=HSFC2B PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.098e-23 Identity = 52/91 (57.14%), Postives = 61/91 (67.03%), Query Frame = 1 Query: 328 PFLLKTYMLIEDPATDNVISWNGDGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFCNQMFRKGEKDLLCKIRRR 600 PF+ KTY ++EDP TD VI W FVV P F++ LLP FKH+NFSSFVRQLNTYGFRKV RWEF + F +G+ LL I RR Sbjct: 11 PFVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTLLPAHFKHNNFSSFVRQLNTYGFRKVDPDRWEFAHASFLRGQTHLLRNIVRR 101
BLAST of CB290493 vs. ExPASy Swiss-Prot
Match: HFC1B_ORYSJ (Heat stress transcription factor C-1b OS=Oryza sativa subsp. japonica GN=HSFC1B PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.098e-23 Identity = 49/92 (53.26%), Postives = 66/92 (71.74%), Query Frame = 1 Query: 328 PFLLKTYMLIEDPATDNVISWNGDGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFCNQMFRKGEKDLLCKIRRRK 603 PF+ KT+ ++ DP+T+ V+ W G G F+V PA F+ LLP+ FKH NF+SFVRQLNTYGFRKV RWEF ++ F +G+ LL +I R+K Sbjct: 24 PFVAKTFHMVSDPSTNAVVRWGGAGNTFLVLDPAAFSDFLLPSYFKHRNFASFVRQLNTYGFRKVDPDRWEFAHESFLRGQAQLLPRIVRKK 115
BLAST of CB290493 vs. ExPASy Swiss-Prot
Match: HSFA8_ARATH (Heat stress transcription factor A-8 OS=Arabidopsis thaliana GN=HSFA8 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.728e-22 Identity = 51/97 (52.58%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 316 STPPPFLLKTYMLIEDPATDNVISWNGDG-TGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFCNQMFRKGEKDLLCKIRRRK 603 S+ PFL K Y +++D TD++ISW+ FV+ F+ LLP FKHSNFSSF+RQLN YGFRKV RWEF N F +G+KDLL + RRK Sbjct: 15 SSVAPFLRKCYDMVDDSTTDSIISWSPSADNSFVILDTTVFSVQLLPKYFKHSNFSSFIRQLNIYGFRKVDADRWEFANDGFVRGQKDLLKNVIRRK 111 The following BLAST results are available for this feature:
BLAST of CB290493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290493 ID=CB290493; Name=CB290493; organism=Citrus sinensis; type=EST; length=796bpback to top |