CB290493
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290493 vs. ExPASy Swiss-Prot
Match: HSF4_MOUSE (Heat shock factor protein 4 OS=Mus musculus GN=Hsf4 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.732e-17 Identity = 46/106 (43.40%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 316 STPPPFLLKTYMLIEDPATDNVISWNGDGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVAT-----------SRWEFCNQMFRKGEKDLLCKIRRR 600 S P FL K + L+ DP TD++I W+ GT F+V + FA+++LP FKHSN +SFVRQLN YGFRKV + EF + F +G + LL ++RR+ Sbjct: 15 SPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK 120
BLAST of CB290493 vs. ExPASy Swiss-Prot
Match: HSF4_HUMAN (Heat shock factor protein 4 OS=Homo sapiens GN=HSF4 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.732e-17 Identity = 46/106 (43.40%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 316 STPPPFLLKTYMLIEDPATDNVISWNGDGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVAT-----------SRWEFCNQMFRKGEKDLLCKIRRR 600 S P FL K + L+ DP TD++I W+ GT F+V + FA+++LP FKHSN +SFVRQLN YGFRKV + EF + F +G + LL ++RR+ Sbjct: 16 SPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK 121
BLAST of CB290493 vs. ExPASy Swiss-Prot
Match: HSF4_CANFA (Heat shock factor protein 4 OS=Canis familiaris GN=HSF4 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.732e-17 Identity = 46/106 (43.40%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 316 STPPPFLLKTYMLIEDPATDNVISWNGDGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVAT-----------SRWEFCNQMFRKGEKDLLCKIRRR 600 S P FL K + L+ DP TD++I W+ GT F+V + FA+++LP FKHSN +SFVRQLN YGFRKV + EF + F +G + LL ++RR+ Sbjct: 15 SPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK 120
BLAST of CB290493 vs. ExPASy Swiss-Prot
Match: HSF_YEAST (Heat shock factor protein OS=Saccharomyces cerevisiae GN=HSF1 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.486e-17 Identity = 45/115 (39.13%), Postives = 64/115 (55.65%), Query Frame = 1 Query: 304 YARKSTPPPFLLKTYMLIEDPATDNVISWNGDGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKV-----------ATSRWEFCNQMFRKGEKDLLCKIRRRKAWAN 615 Y + P F+ K + ++ D + +I W DG F+V EF +LP FKHSNF+SFVRQLN YG+ KV + +W+F N+ F +G +DLL KI R+K +N Sbjct: 166 YQSHKSRPAFVNKLWSMLNDDSNTKLIQWAEDGKSFIVTNREEFVHQILPKYFKHSNFASFVRQLNMYGWHKVQDVKSGSIQSSSDDKWQFENENFIRGREDLLEKIIRQKGSSN 280
BLAST of CB290493 vs. ExPASy Swiss-Prot
Match: HSF3_CHICK (Heat shock factor protein 3 OS=Gallus gallus GN=HSF3 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.277e-16 Identity = 45/103 (43.69%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 325 PPFLLKTYMLIEDPATDNVISWNGDGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVA-----------TSRWEFCNQMFRKGEKDLLCKIRRR 600 P FL K + L+EDP +D+VI W+ +G F + FA++LLP FKH+N SSF+RQLN YGFRKV S EF + F++G LL I+R+ Sbjct: 17 PGFLAKLWALVEDPQSDDVICWSRNGENFCILDEQRFAKELLPKYFKHNNISSFIRQLNMYGFRKVVALENGMITAEKNSVIEFQHPFFKQGNAHLLENIKRK 119
BLAST of CB290493 vs. ExPASy Swiss-Prot
Match: HSF_XENLA (Heat shock factor protein OS=Xenopus laevis GN=hsf1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.668e-16 Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 316 STPPPFLLKTYMLIEDPATDNVISWNGDGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVA-----------TSRWEFCNQMFRKGEKDLLCKIRRR 600 S P FL K + L+EDP TD +I W+ +G F V+ +FA+++LP FKH+N +SFVRQLN YGFRKV EF + F +G++ LL I+R+ Sbjct: 10 SNVPAFLAKLWTLVEDPDTDPLICWSPEGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPYFIRGQEQLLENIKRK 115
BLAST of CB290493 vs. ExPASy Swiss-Prot
Match: HSF1_MOUSE (Heat shock factor protein 1 OS=Mus musculus GN=Hsf1 PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 6.337e-16 Identity = 45/109 (41.28%), Postives = 62/109 (56.88%), Query Frame = 1 Query: 307 ARKSTPPPFLLKTYMLIEDPATDNVISWNGDGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVA-----------TSRWEFCNQMFRKGEKDLLCKIRRR 600 A S P FL K + L+ DP TD +I W+ G F V+ +FA+++LP FKH+N +SFVRQLN YGFRKV EF + F +G++ LL I+R+ Sbjct: 10 AGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRK 118
BLAST of CB290493 vs. ExPASy Swiss-Prot
Match: HSF1_HUMAN (Heat shock factor protein 1 OS=Homo sapiens GN=HSF1 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.337e-16 Identity = 45/109 (41.28%), Postives = 62/109 (56.88%), Query Frame = 1 Query: 307 ARKSTPPPFLLKTYMLIEDPATDNVISWNGDGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVA-----------TSRWEFCNQMFRKGEKDLLCKIRRR 600 A S P FL K + L+ DP TD +I W+ G F V+ +FA+++LP FKH+N +SFVRQLN YGFRKV EF + F +G++ LL I+R+ Sbjct: 10 AGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRK 118
BLAST of CB290493 vs. ExPASy Swiss-Prot
Match: HSF1_BOVIN (Heat shock factor protein 1 OS=Bos taurus GN=HSF1 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.337e-16 Identity = 46/109 (42.20%), Postives = 61/109 (55.96%), Query Frame = 1 Query: 307 ARKSTPPPFLLKTYMLIEDPATDNVISWNGDGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVA-----------TSRWEFCNQMFRKGEKDLLCKIRRR 600 A S P FL K + L+ DP TD +I W+ G F V +FA+++LP FKHSN +SFVRQLN YGFRKV EF + F +G++ LL I+R+ Sbjct: 10 AGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVLDQGQFAKEVLPKYFKHSNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRK 118
BLAST of CB290493 vs. ExPASy Swiss-Prot
Match: HSF2_MOUSE (Heat shock factor protein 2 OS=Mus musculus GN=Hsf2 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.408e-15 Identity = 52/171 (30.41%), Postives = 81/171 (47.37%), Query Frame = 1 Query: 310 RKSTPPPFLLKTYMLIEDPATDNVISWNGDGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVA-----------TSRWEFCNQMFRKGEKDLLCKIRRRKAWANRXXXXXXXXXXXESHDEDQRXXXXXXXXXEYNTLRDENKRLKKENGNLSSELVSMKRK 789 + S P FL K + L+E+ T+ I+W+ +G F+V FA+++LP FKH+N +SFVRQLN YGFRKV EF + F++G+ DLL I+R+ + + D + + T+ LK EN +L E+ ++ K Sbjct: 3 QSSNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQLNMYGFRKVVHIESGIIKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSK------PEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAK 167 The following BLAST results are available for this feature:
BLAST of CB290493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290493 ID=CB290493; Name=CB290493; organism=Citrus sinensis; type=EST; length=796bpback to top |