CB290498
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290498 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCM (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae serotype O1 (strain M66-2) GN=lldD PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.152e-32 Identity = 67/169 (39.64%), Postives = 104/169 (61.54%), Query Frame = -2 Query: 234 YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIV 740 Y G K +D ++ D S++WKD++W++ P+++KG+L EDA A+++GA GI+VSNHG RQLD V +TV AL + A KG + + +D G+R G DV + LALGA +GR ++LA G AGV +L + E + M L+G +S+ E++R+ +V Sbjct: 210 YRGSPTKLED--YIGWLGANFDPSISWKDLEWIRDFWDGPMIIKGILDTEDAKDAVRFGADGIVVSNHGGRQLDGVLSTVQALPAIADAVKGDLKILVDSGIRTGLDVVRMLALGADCTMLGRSFIYALAAQGRAGVENLLDLYEKEMRVAMTLTGAKSIAELSRDSLV 376
BLAST of CB290498 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCH (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae GN=lldD PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.152e-32 Identity = 67/169 (39.64%), Postives = 104/169 (61.54%), Query Frame = -2 Query: 234 YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIV 740 Y G K +D ++ D S++WKD++W++ P+++KG+L EDA A+++GA GI+VSNHG RQLD V +TV AL + A KG + + +D G+R G DV + LALGA +GR ++LA G AGV +L + E + M L+G +S+ E++R+ +V Sbjct: 210 YRGSPTKLED--YIGWLGANFDPSISWKDLEWIRDFWDGPMIIKGILDTEDAKDAVRFGADGIVVSNHGGRQLDGVLSTVQALPAIADAVKGDLKILVDSGIRTGLDVVRMLALGADCTMLGRSFIYALAAQGRAGVENLLDLYEKEMRVAMTLTGAKSIAELSRDSLV 376
BLAST of CB290498 vs. ExPASy Swiss-Prot
Match: LLDD_SALPC (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi C (strain RKS4594) GN=lldD PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.152e-32 Identity = 66/169 (39.05%), Postives = 108/169 (63.91%), Query Frame = -2 Query: 234 YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIV 740 Y+GK +D ++AN D S++WKD++W++ P+++KG+L EDA A+++GA GI+VSNHG RQLD V ++ AL + A KG + + D G+R G DV + +ALGA V +GR ++LA G+AGV +L ++ E ++ M L+G +++ EI+ + +V Sbjct: 210 YLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGLLDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLTGAKTISEISGDSLV 376
BLAST of CB290498 vs. ExPASy Swiss-Prot
Match: LLDD_PSEMY (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas mendocina (strain ymp) GN=lldD PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.152e-32 Identity = 69/162 (42.59%), Postives = 103/162 (63.58%), Query Frame = -2 Query: 234 SGLASYVA---NQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIV 710 +GLA Y+ D S++WKD++W++ P+++KG+L EDA A+ +GA GIIVSNHG RQLD V ++ AL + A KG + + D G+R G DV + LALGA V +GR ++LAV G+AGV +L ++ E + M L+G +S+ EIT + +V Sbjct: 215 TGLADYIGWLGANFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVTFGADGIIVSNHGGRQLDGVLSSARALPAIADAVKGELKILADSGIRTGLDVVRMLALGADTVLLGRAFIYALAVAGQAGVSNLLDLIEKEMRVAMVLTGAKSIAEITSDLLV 376
BLAST of CB290498 vs. ExPASy Swiss-Prot
Match: LLDD_AZOC5 (L-lactate dehydrogenase [cytochrome] OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=lldD PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.152e-32 Identity = 69/162 (42.59%), Postives = 103/162 (63.58%), Query Frame = -2 Query: 234 SGLASYV---ANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIV 710 + LA Y+ A D S++WKD++W+++ P+++KG+L DA A+ +GA GI+VSNHG RQLD V ++ AL + A + V D G+R G DV + LALGA GV +GR ++LA G+AGV +L ++ E + MAL+G RS+ EITR+ +V Sbjct: 215 TNLADYIGWLAANFDPSISWKDLEWIRSFWKGPMIIKGILDPVDARDAVAFGADGIVVSNHGGRQLDGVLSSARALPAIADAVGDDLTVLADSGIRTGLDVVRMLALGAKGVLLGRAFAYALATHGQAGVANLLDLIEKEMRVAMALTGARSIAEITRDSLV 376
BLAST of CB290498 vs. ExPASy Swiss-Prot
Match: LLDD_AGRVS (L-lactate dehydrogenase [cytochrome] OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=lldD PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.728e-32 Identity = 65/166 (39.16%), Postives = 102/166 (61.45%), Query Frame = -2 Query: 234 KMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIV 731 + KT+ + ++ D S+ WKD++W++ P+++KG+L EDA A+++GA GIIVSNHG RQLD V ++ AL + A KG + + D G+R G DV + +A GA GV +GR ++LA G+AGV +L + E + M L+G RS+ EI+ + +V Sbjct: 211 RQQKTNLADYVGWLGENFDPSIGWKDLEWIRDFWKGPMIIKGILDPEDAKDAVRFGADGIIVSNHGGRQLDGVLSSARALPAIAAAVKGDLTILADSGIRSGLDVVRMIAQGADGVLIGRAFVYALAAAGQAGVENLLDLFAKEMRVAMTLTGARSIAEISPDSLV 376
BLAST of CB290498 vs. ExPASy Swiss-Prot
Match: LLDD_PSEAB (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=lldD PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.787e-32 Identity = 66/162 (40.74%), Postives = 103/162 (63.58%), Query Frame = -2 Query: 234 SGLASYVA---NQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIV 710 +GL Y+ D S+ WKD++W++ P+++KG+L EDA A+++GA GI+VSNHG RQLD V ++ AL + A KG + + D G+R G DV + +ALGA V +GR ++LA GEAGVR +L+++ E + M L+G +S+ EI+ + +V Sbjct: 215 TGLEDYIGWLGANFDPSIAWKDLEWIREFWDGPMVIKGILDPEDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGELAILADSGIRTGLDVVRMIALGADSVLLGRAFVYALAAAGEAGVRNLLELIEKEMRVAMVLTGAKSIGEISADSLV 376
BLAST of CB290498 vs. ExPASy Swiss-Prot
Match: LLDD_HAEDU (L-lactate dehydrogenase [cytochrome] OS=Haemophilus ducreyi GN=lldD PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.148e-31 Identity = 70/180 (38.89%), Postives = 107/180 (59.44%), Query Frame = -2 Query: 234 PHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIV 773 PH TL N G Y GK DD A ++A+ D S++WKD++W++ P+++KG+L EDA A+++GA GI+VSNHG RQLD ++ AL + A KG + + D G+R G DV + +ALGA +GR ++L+ G AGV +L + R E + M L+ + +I R+ +V Sbjct: 201 PH-TLGNVSG-YTGKSVGLDD--YAVWLADNFDPSISWKDLEWIRDFWDGPMVIKGILDVEDAKDAVRFGADGIVVSNHGGRQLDGALSSAKALPSIADAVKGEIKILADSGIRNGLDVVRMIALGADATLIGRAFVYALSAAGRAGVENMLDIFRKEMHVAMTLTSNARISDINRDALV 376
BLAST of CB290498 vs. ExPASy Swiss-Prot
Match: LLDD_SERP5 (L-lactate dehydrogenase [cytochrome] OS=Serratia proteamaculans (strain 568) GN=lldD PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.958e-31 Identity = 65/169 (38.46%), Postives = 105/169 (62.13%), Query Frame = -2 Query: 234 YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIV 740 Y GK +D ++ D S++WKD+ W++ P+++KG+L EDA A+++GA GI+VSNHG RQLD V +T AL + +A KG + + D G+R G DV + +ALGA GV +GR ++LA G+AGV +L+++ E + M L G +++ +I+ + +V Sbjct: 210 YRGKPTSLED--YIGWLGTNFDPSISWKDLDWIREFWQGPMIIKGILDPEDAKDAVRFGADGIVVSNHGGRQLDGVLSTAHALPAIAEAVKGDITLLADSGIRSGLDVVRMIALGADGVLLGRAFAYALAAAGQAGVANLLELIDKEMRVAMTLIGAKTIADISADSLV 376
BLAST of CB290498 vs. ExPASy Swiss-Prot
Match: LLDD_VIBPA (L-lactate dehydrogenase [cytochrome] OS=Vibrio parahaemolyticus GN=lldD PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.361e-31 Identity = 65/169 (38.46%), Postives = 105/169 (62.13%), Query Frame = -2 Query: 234 YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIV 740 Y G+ K +D ++ D S++WKD++W++ P+++KG+L EDA A+++GA GI+VSNHG RQLD V +T AL + A KG + +F+D G+R G DV + LALGA +GR ++LA G AGV +L + E + M L+G +++ +++R+ +V Sbjct: 210 YRGEPTKLED--YIGWLGANFDPSISWKDLEWIRDFWDGPMVIKGILDEEDAKDAVRFGADGIVVSNHGGRQLDGVLSTAKALPSIADAVKGDLKIFVDSGIRTGLDVVRMLALGADCTLLGRSFVYALAAQGGAGVENLLDLYDKEMRVAMTLTGAKTIADLSRDSLV 376 The following BLAST results are available for this feature:
BLAST of CB290498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290498 ID=CB290498; Name=CB290498; organism=Citrus sinensis; type=EST; length=828bpback to top |