CB290499
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290499 vs. ExPASy Swiss-Prot
Match: LLDD_CITK8 (L-lactate dehydrogenase [cytochrome] OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=lldD PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.016e-27 Identity = 79/268 (29.48%), Postives = 129/268 (48.13%), Query Frame = 2 Query: 47 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGA 778 I+ +Y A A+ LP ++ Y GA ++TL+ N S + R R+L+++S + + TT+ +SMP+ +AP M GE G TLS+ + +EEV+ T +FQLYV + R ++RA+ AG + TVD P G R D + + P+ L+ Y GL Y+GK +D ++AN D S++WKD++W++ P+++KG+L EDA A+++GA Sbjct: 3 ISAASDYRAAAQRILPPFLFHYIDGGAYAEYTLRRNVEDLSEVALRQRVLKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAALRRYWQAATHPQWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGA 267
BLAST of CB290499 vs. ExPASy Swiss-Prot
Match: LLDD_XANP2 (L-lactate dehydrogenase [cytochrome] OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=lldD PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.633e-27 Identity = 79/265 (29.81%), Postives = 124/265 (46.79%), Query Frame = 2 Query: 47 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLP-------PHLTLKNYEGLYIGKMDKTDDSGLAS--------------YVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGA 778 I++ +Y A+ +LP ++ Y GA + TL+ N S + R R+L+ V ++D++TT+L +SMP+ +AP M GE G TLS+ + S+EEV S +FQLYV K R ++RA AG + + TVD P G R D + P L + +G M D G S ++ N D S+ WKD++W++ P+++KG+L EDA A+++GA Sbjct: 3 ISSSSDYREAARRRLPPFLFHYIDGGAYAEATLRRNVEDLSDLALRQRVLKSVGEVDLSTTLLKQQLSMPVGLAPVGLTGMYARRGEVQAAQAATQKGIPFTLSTVSVCSIEEVQSQVGKPIWFQLYVLKDRGFMKNALERAWAAGIRTLVFTVDMPVPGARYRDAHSGMSGPNAAFRRMVQAVLHPFWAYDVGLMGTPHDLGNVSAYRKEKTSLEDYVGWLGNNFDPSIGWKDLEWIREFWKGPMVIKGILDPEDARDAVRFGA 267
BLAST of CB290499 vs. ExPASy Swiss-Prot
Match: LLDD_SALPC (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi C (strain RKS4594) GN=lldD PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.633e-27 Identity = 78/268 (29.10%), Postives = 130/268 (48.51%), Query Frame = 2 Query: 47 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGA 778 I+ +Y A A+ LP ++ Y GA ++TL+ N S++ R R+L+++S + + TT+ +SMP+ +AP M GE G TLS+ + +EEV+ T +FQLYV + R ++RA+ AG + TVD P G R D + + P+ ++ Y GL Y+GK +D ++AN D S++WKD++W++ P+++KG+L EDA A+++GA Sbjct: 3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGLLDPEDARDAVRFGA 267
BLAST of CB290499 vs. ExPASy Swiss-Prot
Match: LLDD_ESCF3 (L-lactate dehydrogenase [cytochrome] OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=lldD PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.633e-27 Identity = 78/268 (29.10%), Postives = 130/268 (48.51%), Query Frame = 2 Query: 47 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGA 778 I+ +Y A A+ LP ++ Y GA ++TL+ N S++ R R+L+++S + + TT+ +SMP+ +AP M GE G TLS+ + +EEV+ T +FQLYV + R ++RA+ AG + TVD P G R D + + P+ ++ Y GL Y+GK +D ++AN D S++WKD++W++ P+++KG+L EDA A+++GA Sbjct: 3 ISAASDYRAAAQRILPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAGAADAHGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGA 267
BLAST of CB290499 vs. ExPASy Swiss-Prot
Match: LLDD_PSEE4 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas entomophila (strain L48) GN=lldD PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.865e-27 Identity = 76/260 (29.23%), Postives = 127/260 (48.85%), Query Frame = 2 Query: 62 EYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYE-------GLYIGKMDKTDD-----------SGLASYV---ANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGA 778 +Y A A+ KLP ++ Y GA + TL+ N + + I R R+L+++S + + T + +SMP+ +AP M GE G T+S+ + +EEV+ +FQLYV K R ++RA+ AG K + TVD P G R D + P + ++ L +G + + D +GLA Y+ N D S++WKD++W++ P+++KG+L A+DA A+++GA Sbjct: 8 DYRAAAQRKLPPFLFHYADGGAYAEHTLRHNVSDLASIALRQRVLKNMSDLSLETRLFDETLSMPVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAPLRRVWQAMTHPQWALDVGLLGRPHDLGNISKYRGNPTGLADYIGWLGNNFDPSISWKDLEWIREFWDGPMIIKGILDADDARDAVKFGA 267
BLAST of CB290499 vs. ExPASy Swiss-Prot
Match: LLDD_SALNS (L-lactate dehydrogenase [cytochrome] OS=Salmonella newport (strain SL254) GN=lldD PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.660e-27 Identity = 77/268 (28.73%), Postives = 129/268 (48.13%), Query Frame = 2 Query: 47 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGA 778 I+ +Y A A+ LP ++ Y GA ++TL+ N S++ R R+L+++S + + T + +SMP+ +AP M GE G TLS+ + +EEV+ T +FQLYV + R ++RA+ AG + TVD P G R D + + P+ ++ Y GL Y+GK +D ++AN D S++WKD++W++ P+++KG+L EDA A+++GA Sbjct: 3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETPLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGA 267
BLAST of CB290499 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPG (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain GB-1) GN=lldD PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.000e-26 Identity = 78/260 (30.00%), Postives = 129/260 (49.62%), Query Frame = 2 Query: 62 EYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADI------KNRFVLPPHLTLKNYEGLY-IGKMDKTDD-----------SGLASYV---ANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGA 778 +Y A A+ KLP ++ Y GA + TL+ N + + I R R+L ++S++ ++T + +SMP+ +AP M GE G T+S+ + +EEV+ +FQLYV K R ++RA+ AG K + TVD P G R D KN + + + E + +G M + D +GLA Y+ N D S++WKD++W++ P+++KG+L A+DA A+++GA Sbjct: 8 DYRAAAQRKLPPFLFHYADGGAYAEHTLRHNVSDLASIALRQRVLNNMSELSLSTRLFDETLSMPVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGKNGPLRRVLQAMTHPEWAWDVGVMGRPHDLGNISKYRGNPTGLADYIGWLGNNFDPSISWKDLEWIREYWDGPMIIKGILDADDARDAVKFGA 267
BLAST of CB290499 vs. ExPASy Swiss-Prot
Match: LLDD_PSEMY (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas mendocina (strain ymp) GN=lldD PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.000e-26 Identity = 79/260 (30.38%), Postives = 125/260 (48.08%), Query Frame = 2 Query: 62 EYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLY-------IGKMDKTDD-----------SGLASYV---ANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGA 778 +Y A A+ KLP ++ Y GA + TL+ N S I R R+L+++S++D++T + G +SMP+ +AP M GE G TLS+ + +EEV+ +FQLYV K R ++RA+ AG + TVD P G R D + P + + + +G M K D +GLA Y+ D S++WKD++W++ P+++KG+L EDA A+ +GA Sbjct: 8 DYRAAAERKLPPFLFHYADGGAYAEHTLRRNVADLSNIELRQRVLKNMSELDLSTELFGEKMSMPVGLAPVGLTGMYARRGEVQAAKAAAAKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNGPLRRVLQAMTHPQWAWDVGVMGKPHDLGNISAYRGNPTGLADYIGWLGANFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVTFGA 267
BLAST of CB290499 vs. ExPASy Swiss-Prot
Match: LLDD_AZOC5 (L-lactate dehydrogenase [cytochrome] OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=lldD PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.000e-26 Identity = 79/265 (29.81%), Postives = 126/265 (47.55%), Query Frame = 2 Query: 47 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYE-------GLYIGKMDKTDDSG-----------LASYV---ANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGA 778 I++ +Y A AK +LP ++ Y GA ++TL+ N S I R ++LR+V+ + + T + G ++MP+ +AP M GE G TLS+ + +EEV S +FQLYV K R ++RA+ AG + TVD P G R D + T + + L +G + K D G LA Y+ A D S++WKD++W+++ P+++KG+L DA A+ +GA Sbjct: 3 ISSPNDYRAAAKSRLPPFLFHYVDGGAYAEYTLRRNVEDLSHIALRQQVLRNVADLSLETELFGQKLTMPVALAPVGLTGMLARRGEVQAAKAAQAKGVPFTLSTVSVCPIEEVQSQCAKPIWFQLYVLKDRGFMRNALERAQAAGINTLIFTVDMPVPGARYRDAHSGMSGRSGPTRRVLQAMVHPRWALDVGLLGKPHDLGNISTYRGKPTNLADYIGWLAANFDPSISWKDLEWIRSFWKGPMIIKGILDPVDARDAVAFGA 267
BLAST of CB290499 vs. ExPASy Swiss-Prot
Match: LLDD_SHISS (L-lactate dehydrogenase [cytochrome] OS=Shigella sonnei (strain Ss046) GN=lldD PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.706e-26 Identity = 77/268 (28.73%), Postives = 127/268 (47.39%), Query Frame = 2 Query: 47 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGA 778 I+ +Y A A+ LP ++ Y GA ++TL+ N S + R RIL+++S + + TT+ +SMP+ +AP M GE G TLS+ + +EEV+ +FQLYV + R ++RA+ AG + TVD P G R D + + P+ ++ Y GL Y+GK +D ++ N D S++WKD++W++ P+++KG+L EDA A+++GA Sbjct: 3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGA 267 The following BLAST results are available for this feature:
BLAST of CB290499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290499 ID=CB290499; Name=CB290499; organism=Citrus sinensis; type=EST; length=780bpback to top |