CB290519

Overview
NameCB290519
Unique NameCB290519
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290519 vs. ExPASy Swiss-Prot
Match: CP2A7_HUMAN (Cytochrome P450 2A7 OS=Homo sapiens GN=CYP2A7 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.541e-14
Identity = 49/177 (27.68%), Postives = 83/177 (46.89%), Query Frame = -1
Query:  258 DLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXEQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFPVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMFHLMLGSLINSFDWKLDNHNMDME 788
            +LFIAG +T S+T+ +    L+ +P          ++ + K    +  D T++PY++AV+ E                 KD +   F +PKG +VF  + ++ RD S + NP  F P+ FL     FK ++   +PF  G+R C G  LA     L   +++ +F  K      D++
Sbjct:  297 NLFIAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRTKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVFPMLGSVLRDPSFFSNPQDFNPQHFLDDKGQFK-KSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDID 472          
BLAST of CB290519 vs. ExPASy Swiss-Prot
Match: CP1A2_CAVPO (Cytochrome P450 1A2 OS=Cavia porcellus GN=CYP1A2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.541e-14
Identity = 51/194 (26.29%), Postives = 88/194 (45.36%), Query Frame = -1
Query:  216 DLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXEQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFPVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSN--ADFKGQNFELIPFGAGRRICPGLPLAIRMFHLMLGSLINSFDWKL-DNHNMDMEDKFGLTVQKAQPLH 788
            D+F AG DT ++ + W++  L+  P          +  + +      +D  +LPY++A + E                 +D  + GF +PK   VF+N W +  D   W++P  F PERFL +N  A  K  + +++ FG G+R C G  L      L L  L+   ++ +     +D+   +GLT++     H
Sbjct:  313 DIFGAGFDTVTTAISWSLLYLVTKPEIQKKIHKELDAVIGRDRKPRLADRPQLPYMEAFILEVFRYSSFLPFTIPHCTTRDTILNGFYIPKDRCVFINQWQVNHDPKQWEDPFEFRPERFLLANNTAVDKTLSDKILLFGLGKRRCIGETLGRWEVFLFLAILLQQLEFSVPPGVKVDLTPVYGLTMKPPHCQH 506          
BLAST of CB290519 vs. ExPASy Swiss-Prot
Match: CP2J1_RABIT (Cytochrome P450 2J1 OS=Oryctolagus cuniculus GN=CYP2J1 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.931e-14
Identity = 56/198 (28.28%), Postives = 85/198 (42.93%), Query Frame = -1
Query:  201 DLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXEQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFPVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMFHLMLGSLINSFDWK-LDNHNMDMEDKFGLTVQKAQ-PLHAVPGA 788
            DLF+AG +TTS  M W +  +   P          +  + +      +    LPY  AV+ E                  D  +AG+ +PKG  V  N+ A+ +D   W  P TF PE FL  N  FK +    IPF  G+R C G  LA     +   SL+  F +K   +  + +  + G+T+   +  + A+P A
Sbjct:  307 DLFLAGTETTSD-MRWGLLFMALYPEIQEKVHAEIDSVIGQWQQPSMASRESLPYTNAVIHEVQRMGNILPLNVPREVTVDTTLAGYHLPKGTVVLTNLTALHKDPEEWATPDTFNPEHFL-ENGQFKKKE-AFIPFSIGKRACLGEQLAKSELFIFFTSLMQKFTFKPPSDEKLTLNFRMGITLSPVKHRICAIPRA 501          
BLAST of CB290519 vs. ExPASy Swiss-Prot
Match: CP2H1_CHICK (Cytochrome P450 2H1 OS=Gallus gallus GN=CYP2H1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.931e-14
Identity = 51/177 (28.81%), Postives = 83/177 (46.89%), Query Frame = -1
Query:  258 DLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXEQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFPVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMFHLMLGSLINSFDWKLDNHNMDME 788
            DLF+AG  TTS+T+ + +  LL +P          ++ V +      +D ++LPY  AV+ E                 KD ++  + +PK   +F  +  I +D   + NP  F P  FL +N  F+  ++  +PF AG+RIC G  LA     L L S++ +F  K      D++
Sbjct:  294 DLFLAGTGTTSTTLRYGLLILLKHPEIEEKMHKEIDRVVGRDRSPCMADRSQLPYTDAVIHEIQRFIDFLPLNVPHAVIKDTKLRDYFIPKDTMIFPLLSPILQDCKEFPNPEKFDPGHFLNANGTFRRSDY-FMPFSAGKRICAGEGLARMEIFLFLTSILQNFSLKPVKDRKDID 469          
BLAST of CB290519 vs. ExPASy Swiss-Prot
Match: CP241_CANFA (Cytochrome P450 2C41 OS=Canis familiaris GN=CYP2C41 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.746e-14
Identity = 46/168 (27.38%), Postives = 78/168 (46.43%), Query Frame = -1
Query:  285 DLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXEQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFPVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMFHLMLGSLINSFDWK 788
            DLF AG +TTS+T+ + +  LL +P          ++ + +       D +R+PY  AV+ E                  DV+   + +PKG  + +++ ++  DE  +  P  F P  FL  + +FK  ++  + F AG+RIC G  LA     L L +++  F  K
Sbjct:  292 DLFGAGTETTSTTLRYGLLLLLKHPEVTVKVQEEIDRVIGRHQSPHMQDRSRMPYTNAVLHEIQRYIDLVPNSLPHAVTCDVKFRNYVIPKGTTILISLSSVLSDEKEFPRPEIFDPAHFLDDSGNFKKSDY-FMAFSAGKRICVGEGLARMELFLFLTTILQKFTLK 458          
BLAST of CB290519 vs. ExPASy Swiss-Prot
Match: CP21A_MOUSE (Steroid 21-hydroxylase OS=Mus musculus GN=Cyp21 PE=2 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 7.746e-14
Identity = 48/165 (29.09%), Postives = 75/165 (45.45%), Query Frame = -1
Query:  294 DLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXEQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFPVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMFHLMLGSLINSF 788
            DLFI G +TT++T+ WA+A LLH+P          +  +   + +   +  +LP L A + E                 +   I+G+ +PK   +  N+     DE  W+ P  F P+RFL       G+N     FG G R+C G PLA     ++L  L+ +F
Sbjct:  282 DLFIGGTETTATTLSWAVAFLLHHPEIQKRLQEELDLKLGPGSQLLYRNRMQLPLLMATIAEVLRLRPVVPLALPHRATRASSISGYDIPKDMVIIPNIQGANLDEMVWELPSKFWPDRFLE-----PGKNPRTPSFGCGARVCLGEPLARLELFVVLARLLQAF 441          
BLAST of CB290519 vs. ExPASy Swiss-Prot
Match: CP1A1_MICTO (Cytochrome P450 1A1 OS=Microgadus tomcod GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.746e-14
Identity = 54/188 (28.72%), Postives = 84/188 (44.68%), Query Frame = -1
Query:  234 DLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXEQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFPVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNAD--FKGQNFELIPFGAGRRICPGLPLAIRMFHLMLGSLINSFDW-KLDNHNMDMEDKFGLTVQ 788
            DLF AG DT S+ + W++  L+ +P          +  V        +D   LP L+A + E                 KD  + G+ +PK   VF+N W I  D   W  P TF P+RFL ++A    K    +++ FG G+R C G  +A     L L  L+    +  +    +DM  ++GLT++
Sbjct:  314 DLFGAGFDTVSTALSWSVMYLVAHPEIQERLHQEIKDKVGLSRSPVLTDRHNLPILEAFIFEIFRHSSFLPFTIPHCATKDTSLDGYFIPKDTCVFINQWQINHDPELWKEPSTFNPDRFLSADASELNKLAGEKVMLFGMGKRRCIGEMVARNEVFLFLAILVQRLTFHAVPGEPLDMTPEYGLTMK 501          
BLAST of CB290519 vs. ExPASy Swiss-Prot
Match: CP2CU_RABIT (Cytochrome P450 2C30 OS=Oryctolagus cuniculus GN=CYP2C30 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.012e-13
Identity = 46/168 (27.38%), Postives = 81/168 (48.21%), Query Frame = -1
Query:  285 DLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXEQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFPVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMFHLMLGSLINSFDWK 788
            D+F AG+ TTSSTM++ +  L+ +P          E+ + +       D + +PY  AV+ E                 +D++  G+ +PKG  +  ++ ++  DE  + NP  F P  FL ++ +FK  ++  +PF  G+R C G  LA     L+L +++  F  K
Sbjct:  292 DVFDAGSQTTSSTMQFGLLLLMKHPEIAAKVQEEIERVIGRDRSPCMQDRSCMPYTDAVIHEIQRYIDMVPNNVPHAVTQDIQFRGYLIPKGTHILPSLTSVLYDEKEFPNPEKFDPGHFLDASGNFKKSDY-FLPFSIGKRACAGEGLARMELFLVLTTILQHFTLK 458          
BLAST of CB290519 vs. ExPASy Swiss-Prot
Match: CP242_PIG (Cytochrome P450 2C42 (Fragment) OS=Sus scrofa GN=CYP2C42 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.012e-13
Identity = 45/169 (26.63%), Postives = 78/169 (46.15%), Query Frame = -1
Query:  285 ADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXEQTVCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFPVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMFHLMLGSLINSFDWK 791
            +D+F AG +TTS+TM + +  LL +P          ++ + +       D + +PY  AVV E                  D++   + +PKG  +  ++ ++  D   + NP  F P  FL  + +FK  ++  +PF  G+RIC G  LA     L L +++  F+ K
Sbjct:  129 SDMFSAGTETTSTTMRYGLLLLLKHPEVTAKVQEEIDRVIGRHRSACMQDRSHMPYTDAVVHEIQRYIDLVPTNLPHAVTCDIKFRNYLIPKGTTILTSLTSVLYDCKAFPNPEVFDPGHFLDESGNFKKSDY-FMPFSTGKRICVGEGLARMELFLFLTTILQKFNLK 296          
BLAST of CB290519 vs. ExPASy Swiss-Prot
Match: CP10_LYMST (Cytochrome P450 10 OS=Lymnaea stagnalis GN=CYP10 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.012e-13
Identity = 50/179 (27.93%), Postives = 83/179 (46.37%), Query Frame = -1
Query:  264 DLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXEQTVCKCN-PIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFPVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL---GSNADFKGQNFELIPFGAGRRICPGLPLAIRMFHLMLGSLINSFDWKLDNHNMD 788
            DL +A  +TTSS   W +  L  NP           +   K N  I   D+ +LP ++AVVKE                  D+E+ G+ +P G  V  N++ + RD S +  P   +PER+L   GS  D   ++   + +G G R+C G  +A +  H+ L  +I +F    ++ +++
Sbjct:  347 DLMLAAVETTSSATVWCLYNLAKNPQVQEKLFQEITEAQAKNNGTISAEDLCKLPMVKAVVKETLRLYPITYSTSRNIAE-DMELGGYTIPAGTHVQANLYGMYRDPSLFPEPEGILPERWLRMNGSQMDATIKSTSQLVWGHGARMCLGRRIAEQEMHITLSKIIQNFTLSYNHDDVE 524          
The following BLAST results are available for this feature:
BLAST of CB290519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 372
Match NameE-valueIdentityDescription
CP2A7_HUMAN4.541e-1427.68Cytochrome P450 2A7 OS=Homo sapiens GN=CYP2A7 PE=2... [more]
CP1A2_CAVPO4.541e-1426.29Cytochrome P450 1A2 OS=Cavia porcellus GN=CYP1A2 P... [more]
CP2J1_RABIT5.931e-1428.28Cytochrome P450 2J1 OS=Oryctolagus cuniculus GN=CY... [more]
CP2H1_CHICK5.931e-1428.81Cytochrome P450 2H1 OS=Gallus gallus GN=CYP2H1 PE=... [more]
CP241_CANFA7.746e-1427.38Cytochrome P450 2C41 OS=Canis familiaris GN=CYP2C4... [more]
CP21A_MOUSE7.746e-1429.09Steroid 21-hydroxylase OS=Mus musculus GN=Cyp21 PE... [more]
CP1A1_MICTO7.746e-1428.72Cytochrome P450 1A1 OS=Microgadus tomcod GN=cyp1a1... [more]
CP2CU_RABIT1.012e-1327.38Cytochrome P450 2C30 OS=Oryctolagus cuniculus GN=C... [more]
CP242_PIG1.012e-1326.63Cytochrome P450 2C42 (Fragment) OS=Sus scrofa GN=C... [more]
CP10_LYMST1.012e-1327.93Cytochrome P450 10 OS=Lymnaea stagnalis GN=CYP10 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ca05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ca05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290519 ID=CB290519; Name=CB290519; organism=Citrus sinensis; type=EST; length=797bp
TTTTTTTTTTTTTTTTTCGCATGACTTTATAGTTTATTGAAGATCAACTC
TGTTAAGTTGCGTGTCTACATAAAAAAAAATAAGAGCGCCCACACCTGAG
AATGATTACACACACATATAACTAACCACCAAGCGCTTTATATAGTGGCT
ACCACCAAGCGCTTTATATATTGGCTACAAACTATAGTATAAAACTAGAT
GGCACCAGGGACAGCATGAAGGGGTTGAGCCTTCTGAACGGTGAGGCCAA
ATTTATCTTCCATGTCCATGTTGTGGTTATCAAGCTTCCAATCAAAAGAG
TTAATAAGGGAACCCAACATTAGATGGAACATTCTGATTGCCAATGGTAA
ACCAGGACAAATTCGTCGTCCAGCTCCGAAGGGAATTAGCTCAAAATTCT
GGCCTTTGAAATCAGCATTTGACCCTAAAAACCTTTCGGGAATAAAAGTG
TGAGGGTTGTCCCATGTGCTTTCATCTCTGCCAATAGCCCATACATTGAC
AAAAACTTGTGCACCTTTTGGCACTGGGAAGCCTGCAATTTCAACATCTT
TTGTGGCTTTGCGGGGAAGTAATAAGGGAGCTGCAGGGTGCAATCTCAAA
GTTTCTTTAACAACAGCTTGTAGATAAGGTAGCCGAGTGATGTCAGATTC
CTCAATTGGGTTACACTTGCAAACTGTTTGTTCTAGCTCCAATTTTGCTT
TCAATAAAGCCTCAGGGTTGTGGAGTAGTTCTGCCATTGCCCATTCCATT
GTACTTGAAGTTGTGTCATTCCCCGCAATAAACAAATCCGCCTCGTG
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