CB290527

Overview
NameCB290527
Unique NameCB290527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 1433F_RAT (14-3-3 protein eta OS=Rattus norvegicus GN=Ywhah PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.242e-37
Identity = 80/124 (64.52%), Postives = 91/124 (73.39%), Query Frame = -2
Query:  401 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPEDGEDAQKAN 772
            KMKGDYYRYLAE   G++K      S              + PTHPIRLGLALNFSVFYYEI N+PE+AC LAKQAFD+AI+ELDTLNE+SYKDSTLIMQL RDNLTLWTSD  +  E+A + N
Sbjct:  125 KMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEHMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD--QQDEEAGEGN 246          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 1433F_MOUSE (14-3-3 protein eta OS=Mus musculus GN=Ywhah PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.242e-37
Identity = 80/124 (64.52%), Postives = 91/124 (73.39%), Query Frame = -2
Query:  401 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPEDGEDAQKAN 772
            KMKGDYYRYLAE   G++K      S              + PTHPIRLGLALNFSVFYYEI N+PE+AC LAKQAFD+AI+ELDTLNE+SYKDSTLIMQL RDNLTLWTSD  +  E+A + N
Sbjct:  125 KMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEHMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD--QQDEEAGEGN 246          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 1433F_BOVIN (14-3-3 protein eta OS=Bos taurus GN=YWHAH PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.242e-37
Identity = 80/124 (64.52%), Postives = 91/124 (73.39%), Query Frame = -2
Query:  401 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPEDGEDAQKAN 772
            KMKGDYYRYLAE   G++K      S              + PTHPIRLGLALNFSVFYYEI N+PE+AC LAKQAFD+AI+ELDTLNE+SYKDSTLIMQL RDNLTLWTSD  +  E+A + N
Sbjct:  125 KMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEHMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD--QQDEEAGEGN 246          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 143B2_ONCMY (14-3-3 protein beta/alpha-2 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.720e-37
Identity = 76/125 (60.80%), Postives = 92/125 (73.60%), Query Frame = -2
Query:  398 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPEDGEDAQKANG 772
            KMKGDYYRYL+E   GD KK    NS +           ++ PTHPIRLGLALNFSVF+YEI+N+PE+AC LAK AFDEAI+ELDTLNE+SYKDSTLIMQL + +LTLWTS+    G++ +   G
Sbjct:  120 KMKGDYYRYLSEVAAGDAKKTTVDNSQQAYQDAFDISKKEMQPTHPIRLGLALNFSVFFYEILNNPEKACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLKGHLTLWTSE--NQGDEGETGEG 242          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 1433_EIMTE (14-3-3 protein OS=Eimeria tenella PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.518e-35
Identity = 75/138 (54.35%), Postives = 96/138 (69.57%), Query Frame = -2
Query:  359 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPEDGEDAQKANGTAKVGGGEDAE*Q 772
            KMKGDYYRY++EF   + KK +A  + +          A+LP THPIRLGLALN+SVFYYEI+N P++AC +AK AFD+AI+E D+++E+SYKDSTLIMQL RDNLTLWTSD+    +  Q     A+    E  E Q
Sbjct:  140 KMKGDYYRYISEFSNEEGKKASAEQAEESYKRATDTAEAELPSTHPIRLGLALNYSVFYYEILNQPQKACEMAKLAFDDAITEFDSVSEDSYKDSTLIMQLLRDNLTLWTSDLQTQEQQQQPVGEGAEAPKVEATEQQ 277          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 14333_ENTHI (14-3-3 protein 3 (Fragment) OS=Entamoeba histolytica PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.518e-35
Identity = 73/116 (62.93%), Postives = 88/116 (75.86%), Query Frame = -2
Query:  425 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPED 772
            KM+GDYYRY AEF   ++++E A  S+           ADL PTHPIRLGLALNFSVFYYEIMN  ++AC LAKQAFD++I++LD + E SYKDSTLIMQL RDNLTLWTSD  ++
Sbjct:  120 KMEGDYYRYYAEFTVDEKRQEVADKSLAAYTEATEISNADLAPTHPIRLGLALNFSVFYYEIMNDADKACQLAKQAFDDSIAKLDEVPESSYKDSTLIMQLLRDNLTLWTSDTADE 235          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 1433_NEOCA (14-3-3 protein homolog OS=Neospora caninum PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.536e-35
Identity = 69/121 (57.02%), Postives = 90/121 (74.38%), Query Frame = -2
Query:  410 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPEDGEDAQ 772
            KMKGDYYRY++EF   + KK+AA  + +             P THPIRLGLALN+SVF+YEI+N P++AC +AK+AFD+AI+E D ++E+SYKDSTLIMQL RDNLTLWTSD+  D +  +
Sbjct:  135 KMKGDYYRYISEFSGEEGKKQAADQAQESYQKATETAEGHSPATHPIRLGLALNYSVFFYEILNLPQQACEMAKRAFDDAITEFDNVSEDSYKDSTLIMQLLRDNLTLWTSDLQADQQQQE 255          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 14331_ENTHI (14-3-3 protein 1 OS=Entamoeba histolytica PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.843e-35
Identity = 72/112 (64.29%), Postives = 85/112 (75.89%), Query Frame = -2
Query:  437 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSD 772
            KM+GDYYRY AEF   +++KE A  S+           A+L PTHPIRLGLALNFSVFY+EIMN  ++AC LAKQAFD+AI++LD + E  YKDSTLIMQL RDNLTLWTSD
Sbjct:  123 KMEGDYYRYFAEFTVDEKRKEVADKSLAAYTEATEISNAELAPTHPIRLGLALNFSVFYFEIMNDADKACQLAKQAFDDAIAKLDEVPENMYKDSTLIMQLLRDNLTLWTSD 234          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 14332_ENTHI (14-3-3 protein 2 OS=Entamoeba histolytica PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.679e-34
Identity = 73/116 (62.93%), Postives = 87/116 (75.00%), Query Frame = -2
Query:  425 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPED 772
            KM+GDYYRY AEF   +++KE A  S+             L PTHPIRLGLALNFSVFYY+IMN  ++AC LAK+AFDEAI +LD + EESYK+STLIMQL RDNLTLWTSD+ +D
Sbjct:  123 KMEGDYYRYYAEFTVDEKRKEVADKSLAAYQEATDTAA-SLVPTHPIRLGLALNFSVFYYQIMNDADKACQLAKEAFDEAIQKLDEVPEESYKESTLIMQLLRDNLTLWTSDMGDD 237          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 1433S_SHEEP (14-3-3 protein sigma OS=Ovis aries GN=SFN PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.864e-34
Identity = 74/121 (61.16%), Postives = 89/121 (73.55%), Query Frame = -2
Query:  413 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSD-IPEDGEDA 772
            KMKGDYYRYLAE   GD+KK    ++             ++PPT+PIRLGLALNFSVF+YEI NSPE A  LAK  FDEA+++L TL+E+SYKDSTLIMQL RDNLTLWT+D   E+G +A
Sbjct:  122 KMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEGGEA 242          
The following BLAST results are available for this feature:
BLAST of CB290527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433F_RAT1.242e-3764.5214-3-3 protein eta OS=Rattus norvegicus GN=Ywhah P... [more]
1433F_MOUSE1.242e-3764.5214-3-3 protein eta OS=Mus musculus GN=Ywhah PE=1 S... [more]
1433F_BOVIN1.242e-3764.5214-3-3 protein eta OS=Bos taurus GN=YWHAH PE=1 SV=... [more]
143B2_ONCMY4.720e-3760.8014-3-3 protein beta/alpha-2 OS=Oncorhynchus mykiss... [more]
1433_EIMTE1.518e-3554.3514-3-3 protein OS=Eimeria tenella PE=2 SV=1[more]
14333_ENTHI1.518e-3562.9314-3-3 protein 3 (Fragment) OS=Entamoeba histolyti... [more]
1433_NEOCA7.536e-3557.0214-3-3 protein homolog OS=Neospora caninum PE=2 SV... [more]
14331_ENTHI9.843e-3564.2914-3-3 protein 1 OS=Entamoeba histolytica PE=3 SV=... [more]
14332_ENTHI1.679e-3462.9314-3-3 protein 2 OS=Entamoeba histolytica PE=3 SV=... [more]
1433S_SHEEP2.864e-3461.1614-3-3 protein sigma OS=Ovis aries GN=SFN PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ca09_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ca09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290527 ID=CB290527; Name=CB290527; organism=Citrus sinensis; type=EST; length=773bp
TTTTTTTTTATTTTTTCATGTGAACTTCAACATTAAAAACATACCAGTGA
TGTCCAAATAGCAGAAATCCTCCTGTGGCATTTACACCTAAATAAGAAAA
ACACCTTGTGCAATCAGACCAAATAATCCTCTACTACACTCCATCCATCA
TGACAGGAGGGAAACAATGGGAGGCAGGACAAGTACGACCAATCGGGTTT
GGACAACCATGCTATAAAGTAAGCCATACCACAATATGGCACTATTAAAA
TGAAAATACAGCAAGCAAAAGACAATGGCACTTTAAGCAAACACTAAGTT
TGATTAACAAGTCTCATCCTTTCTCCCCCAATCACATAGCAACTCCTCGA
TGCTCTCCTTGTCACTCTGCATCTTCTCCCCCACCAACTTTGGCAGTGCC
ATTAGCCTTCTGGGCATCTTCTCCATCTTCTGGAATGTCAGAAGTCCATA
AGGTAAGGTTGTCCCTAAAAAGCTGCATAATTAAGGTGCTGTCTTTGTAG
GACTCCTCGTTGAGGGTGTCCAGCTCGGAAATAGCTTCATCAAAAGCTTG
TTTTGCAAGATGGCAAGCCCTTTCAGGAGAATTCATGATCTCATAATAAA
AGACAGAGAAATTCAGAGCCAAACCCAATCGGATGGGATGTGTAGGTGGC
AAATCAGCCTCTGCAGCAGTGGTAGCTGTCTCATATGCTTTCATTGAATT
AGCAGCAGCCTCTTTCTTCTCATCGCCAAACTTGAATTCAGCAAGGTACC
GATAATAATCTCCTTTCATCTTA
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