CB290527

Overview
NameCB290527
Unique NameCB290527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1523 contig Csv1_Contig1523:469..1241. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 1433G_SHEEP (14-3-3 protein gamma (Fragments) OS=Ovis aries GN=YWHAG PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.124e-29
Identity = 68/116 (58.62%), Postives = 78/116 (67.24%), Query Frame = -2 
Query:  425 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPED 772
            KMKGDYYRYLAE   G+++     +S K            + PTHPIRLGLALN+SVFYYEI             AFD+AI+ELDTLNE+SYKDSTLIMQL RDNLTLWTSD  +D
Sbjct:   52 KMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIT------------AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDD 155
[Close]
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 1433X_MAIZE (14-3-3-like protein (Fragment) OS=Zea mays PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.802e-20
Identity = 49/61 (80.33%), Postives = 53/61 (86.89%), Query Frame = -2 
Query:  407 IMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPEDGEDAQK 589
            I+NSP+RAC+LAKQAFDEAISELD+L EESYKDSTLIMQL  DNLTLWTSD  EDG D  K
Sbjct:    1 ILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLXDNLTLWTSDTNEDGGDEIK 61
[Close]
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 14338_ORYSJ (Putative 14-3-3-like protein GF14-H OS=Oryza sativa subsp. japonica GN=GF14H PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.687e-18
Identity = 52/113 (46.02%), Postives = 63/113 (55.75%), Query Frame = -2 
Query:  434 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDI 772
            KMKGDYYRYLAEF  G EKK A   S+             L                   EIMNSPERA  +AKQA DEA +E+++   E YKDS L+MQL ++NL LWTS++
Sbjct:  121 KMKGDYYRYLAEFSTGTEKKAATDQSLMAYQAWPCAQLFSL------------------LEIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKENLALWTSEL 215
The following BLAST results are available for this feature:
BLAST of CB290527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433G_SHEEP2.124e-2958.6214-3-3 protein gamma (Fragments) OS=Ovis aries GN=... [more]
1433X_MAIZE1.802e-2080.3314-3-3-like protein (Fragment) OS=Zea mays PE=3 SV... [more]
14338_ORYSJ1.687e-1846.02Putative 14-3-3-like protein GF14-H OS=Oryza sativ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ca09_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ca09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290527 ID=CB290527; Name=CB290527; organism=Citrus sinensis; type=EST; length=773bp
TTTTTTTTTATTTTTTCATGTGAACTTCAACATTAAAAACATACCAGTGA
TGTCCAAATAGCAGAAATCCTCCTGTGGCATTTACACCTAAATAAGAAAA
ACACCTTGTGCAATCAGACCAAATAATCCTCTACTACACTCCATCCATCA
TGACAGGAGGGAAACAATGGGAGGCAGGACAAGTACGACCAATCGGGTTT
GGACAACCATGCTATAAAGTAAGCCATACCACAATATGGCACTATTAAAA
TGAAAATACAGCAAGCAAAAGACAATGGCACTTTAAGCAAACACTAAGTT
TGATTAACAAGTCTCATCCTTTCTCCCCCAATCACATAGCAACTCCTCGA
TGCTCTCCTTGTCACTCTGCATCTTCTCCCCCACCAACTTTGGCAGTGCC
ATTAGCCTTCTGGGCATCTTCTCCATCTTCTGGAATGTCAGAAGTCCATA
AGGTAAGGTTGTCCCTAAAAAGCTGCATAATTAAGGTGCTGTCTTTGTAG
GACTCCTCGTTGAGGGTGTCCAGCTCGGAAATAGCTTCATCAAAAGCTTG
TTTTGCAAGATGGCAAGCCCTTTCAGGAGAATTCATGATCTCATAATAAA
AGACAGAGAAATTCAGAGCCAAACCCAATCGGATGGGATGTGTAGGTGGC
AAATCAGCCTCTGCAGCAGTGGTAGCTGTCTCATATGCTTTCATTGAATT
AGCAGCAGCCTCTTTCTTCTCATCGCCAAACTTGAATTCAGCAAGGTACC
GATAATAATCTCCTTTCATCTTA
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