CB290527

Overview
NameCB290527
Unique NameCB290527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1523 contig Csv1_Contig1523:469..1241. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: BMH1_YEAST (Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 PE=1 SV=4)

HSP 1 Score: 174.481 bits (441), Expect = 5.757e-43
Identity = 86/124 (69.35%), Postives = 100/124 (80.65%), Query Frame = -2
Query:  407 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPEDG--EDAQK 772
            KMKGDY+RYLAEF  GD +++A   S++           +LPPTHPIRLGLALNFSVFYYEI NSP++ACHLAKQAFD+AI+ELDTL+EESYKDSTLIMQL RDNLTLWTSD+ E G  ED Q+
Sbjct:  125 KMKGDYHRYLAEFSSGDAREKATNASLEAYKTASEIATTELPPTHPIRLGLALNFSVFYYEIQNSPDKACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMSESGQAEDQQQ 248          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 14337_ARATH (14-3-3-like protein GF14 nu OS=Arabidopsis thaliana GN=GRF7 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.757e-43
Identity = 89/126 (70.63%), Postives = 103/126 (81.75%), Query Frame = -2
Query:  401 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPED--GEDAQKAN 772
            KMKGDY+RYLAEFK G E+KEAA +++           ADL PTHPIRLGLALNFSVFYYEI+NSP+RAC LAKQAFDEAISELDTL EESYKDSTLIMQL RDNLTLW SDI ++  G++ ++A+
Sbjct:  126 KMKGDYHRYLAEFKTGAERKEAAESTLVAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWNSDINDEAGGDEIKEAS 251          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 14335_ARATH (14-3-3-like protein GF14 upsilon OS=Arabidopsis thaliana GN=GRF5 PE=1 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 7.519e-43
Identity = 90/124 (72.58%), Postives = 101/124 (81.45%), Query Frame = -2
Query:  404 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDI-PEDGEDAQKA 772
            KMKGDY+RYLAEFK G E+KEAA +++           ADL PTHPIRLGLALNFSVFYYEI+NS +RAC LAKQAFDEAISELDTL EESYKDSTLIMQL RDNLTLWTSD+  E G+D ++A
Sbjct:  128 KMKGDYHRYLAEFKTGAERKEAAESTLVAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSSDRACSLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLNDEAGDDIKEA 251          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 14311_ARATH (14-3-3-like protein GF14 omicron OS=Arabidopsis thaliana GN=GRF11 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.519e-43
Identity = 85/118 (72.03%), Postives = 98/118 (83.05%), Query Frame = -2
Query:  419 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPEDGE 772
            KMKGDY+RYLAEFK G +++EAA  S+K           +L  THPIRLGLALNFSVFYYEI+NSPERACHLAK+AFDEAI+ELD+LNE+SYKDSTLIMQL RDNLTLWTSD+ E G+
Sbjct:  124 KMKGDYFRYLAEFKSGADREEAADLSLKAYEAATSSASTELSTTHPIRLGLALNFSVFYYEILNSPERACHLAKRAFDEAIAELDSLNEDSYKDSTLIMQLLRDNLTLWTSDLEEGGK 241          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 14334_ARATH (14-3-3-like protein GF14 phi OS=Arabidopsis thaliana GN=GRF4 PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 9.820e-43
Identity = 86/128 (67.19%), Postives = 101/128 (78.91%), Query Frame = -2
Query:  389 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPEDGEDAQKANGTAK 772
            KMKGDY+RYLAEFK G E+K+AA +++           A+L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQL RDNLTLWTSD+ ++  +  K     K
Sbjct:  132 KMKGDYHRYLAEFKTGQERKDAAEHTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDESPEEIKEAAAPK 259          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 14310_SOLLC (14-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10 PE=2 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 9.820e-43
Identity = 83/120 (69.17%), Postives = 98/120 (81.67%), Query Frame = -2
Query:  413 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPEDGEDA 772
            KMKGDYYRYLAEFK GDE+K+AA ++M            DLPPTHPIRLGLALNFSVFY+EI+NS ++AC +AKQAF+EAI+ELDTL EESYKDSTLIMQL RDNLTLWTSD  +  +++
Sbjct:  133 KMKGDYYRYLAEFKIGDERKQAAEDTMNSYKAAQEIALTDLPPTHPIRLGLALNFSVFYFEILNSSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQDQLDES 252          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 2.188e-42
Identity = 86/122 (70.49%), Postives = 99/122 (81.15%), Query Frame = -2
Query:  407 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPEDGEDAQK 772
            KMKGDY+RYLAEFK G E+KEAA +++           A+L PTHPIRLGLALNFSVFYYEI+NSP+RAC LAKQAFD+AI+ELDTL EESYKDSTLIMQL RDNLTLWTSD+ ++  D  K
Sbjct:  125 KMKGDYHRYLAEFKAGAERKEAAESTLVAYKSASDIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMTDEAGDEIK 246          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 14338_ARATH (14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana GN=GRF8 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 3.731e-42
Identity = 86/120 (71.67%), Postives = 98/120 (81.67%), Query Frame = -2
Query:  413 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPEDGEDA 772
            KMKGDY+RYLAEFK GDE+K AA ++M           ADL PTHPIRLGLALNFSVFYYEI+NS E+AC +AKQAF+EAI+ELDTL EESYKDSTLIMQL RDNLTLWTSD+ E  ++A
Sbjct:  129 KMKGDYHRYLAEFKSGDERKTAAEDTMIAYKAAQDVAVADLAPTHPIRLGLALNFSVFYYEILNSSEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDEA 248          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 14331_SOLLC (14-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 PE=3 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 4.873e-42
Identity = 84/120 (70.00%), Postives = 99/120 (82.50%), Query Frame = -2
Query:  413 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPEDGEDA 772
            KMKGDYYRYLAEFK G+E+KEAA ++M           A+L PTHPIRLGLALNFSVFYYEI+N+ E+AC +AKQAF+EAI+ELDT+ EESYKDSTLIMQL RDNLTLWTSD+ E  ++A
Sbjct:  130 KMKGDYYRYLAEFKVGNERKEAAEDTMLAYKAAQDIAVAELAPTHPIRLGLALNFSVFYYEILNASEKACSMAKQAFEEAIAELDTMGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDEA 249          
BLAST of CB290527 vs. ExPASy Swiss-Prot
Match: 1433D_TOBAC (14-3-3-like protein D OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.365e-42
Identity = 84/120 (70.00%), Postives = 99/120 (82.50%), Query Frame = -2
Query:  413 KMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLFRDNLTLWTSDIPEDGEDA 772
            KMKGDYYRYLAEFK G+E+KEAA ++M           A+L PTHPIRLGLALN+SVFYYEI+N+ E+AC +AKQAF+EAI+ELDTL EESYKDSTLIMQL RDNLTLWTSD+ E  ++A
Sbjct:  130 KMKGDYYRYLAEFKVGNERKEAAEDTMLAYKAAQDIALAELAPTHPIRLGLALNYSVFYYEILNASEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDEA 249          
The following BLAST results are available for this feature:
BLAST of CB290527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
BMH1_YEAST5.757e-4369.35Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 P... [more]
14337_ARATH5.757e-4370.6314-3-3-like protein GF14 nu OS=Arabidopsis thalian... [more]
14335_ARATH7.519e-4372.5814-3-3-like protein GF14 upsilon OS=Arabidopsis th... [more]
14311_ARATH7.519e-4372.0314-3-3-like protein GF14 omicron OS=Arabidopsis th... [more]
14334_ARATH9.820e-4367.1914-3-3-like protein GF14 phi OS=Arabidopsis thalia... [more]
14310_SOLLC9.820e-4369.1714-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10... [more]
14333_ARATH2.188e-4270.4914-3-3-like protein GF14 psi OS=Arabidopsis thalia... [more]
14338_ARATH3.731e-4271.6714-3-3-like protein GF14 kappa OS=Arabidopsis thal... [more]
14331_SOLLC4.873e-4270.0014-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 P... [more]
1433D_TOBAC6.365e-4270.0014-3-3-like protein D OS=Nicotiana tabacum PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ca09_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ca09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290527 ID=CB290527; Name=CB290527; organism=Citrus sinensis; type=EST; length=773bp
TTTTTTTTTATTTTTTCATGTGAACTTCAACATTAAAAACATACCAGTGA
TGTCCAAATAGCAGAAATCCTCCTGTGGCATTTACACCTAAATAAGAAAA
ACACCTTGTGCAATCAGACCAAATAATCCTCTACTACACTCCATCCATCA
TGACAGGAGGGAAACAATGGGAGGCAGGACAAGTACGACCAATCGGGTTT
GGACAACCATGCTATAAAGTAAGCCATACCACAATATGGCACTATTAAAA
TGAAAATACAGCAAGCAAAAGACAATGGCACTTTAAGCAAACACTAAGTT
TGATTAACAAGTCTCATCCTTTCTCCCCCAATCACATAGCAACTCCTCGA
TGCTCTCCTTGTCACTCTGCATCTTCTCCCCCACCAACTTTGGCAGTGCC
ATTAGCCTTCTGGGCATCTTCTCCATCTTCTGGAATGTCAGAAGTCCATA
AGGTAAGGTTGTCCCTAAAAAGCTGCATAATTAAGGTGCTGTCTTTGTAG
GACTCCTCGTTGAGGGTGTCCAGCTCGGAAATAGCTTCATCAAAAGCTTG
TTTTGCAAGATGGCAAGCCCTTTCAGGAGAATTCATGATCTCATAATAAA
AGACAGAGAAATTCAGAGCCAAACCCAATCGGATGGGATGTGTAGGTGGC
AAATCAGCCTCTGCAGCAGTGGTAGCTGTCTCATATGCTTTCATTGAATT
AGCAGCAGCCTCTTTCTTCTCATCGCCAAACTTGAATTCAGCAAGGTACC
GATAATAATCTCCTTTCATCTTA
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