CB290538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290538 vs. ExPASy Swiss-Prot
Match: ZUPT_SALA4 (Zinc transporter zupT OS=Salmonella agona (strain SL483) GN=zupT PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.410e-26 Identity = 63/162 (38.89%), Postives = 99/162 (61.11%), Query Frame = -3 Query: 276 KDIMKKHRR----QVLFSGIITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVAYLFPSSLSPEILEGLLGSVGGVMAFLTLHEMLPLAFDYAGQKQAVKAVFVGMAFMSASLYFLE 749 +D+++K ++ + + I+ +GISLHNFPEG+A F+ + L +G +A+A+ALHNIPEG+AVA PVY AT SK A A +SG AE LG ++ + S +SP ++ ++ +V G+M L++ E++PLA + V GM+ M SL L+ Sbjct: 91 QDLVQKRQQPLPGSIKRTAILLTLGISLHNFPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVAGPVYAATGSKRTAIFWAGISGMAEILGGVLAWLILGSLVSPIVMAAIMAAVAGIMVALSVDELMPLAKEIDPNNNPSYGVLCGMSIMGLSLVILQ 252
BLAST of CB290538 vs. ExPASy Swiss-Prot
Match: ZUPT_ECO7I (Zinc transporter zupT OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=zupT PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.410e-26 Identity = 64/162 (39.51%), Postives = 97/162 (59.88%), Query Frame = -3 Query: 276 KDIMKKH----RRQVLFSGIITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVAYLFPSSLSPEILEGLLGSVGGVMAFLTLHEMLPLAFDYAGQKQAVKAVFVGMAFMSASLYFLE 749 +D+M+K + + + I+ +GISLHNFPEG+A F+ + L +G +A+A+ALHNIPEG+AVA PVY AT SK A A +SG AE LG ++ + S +SP ++ ++ V G+M L++ E++PLA + V GM+ M SL L+ Sbjct: 91 QDLMQKSVQPLPKSIKRTAILLTLGISLHNFPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVAGPVYAATGSKRTAILWAGISGLAEILGGVLAWLILGSMISPVVMAAIMAVVAGIMVALSVDELMPLAKEIDPNNNPSYGVLCGMSVMGFSLVLLQ 252
BLAST of CB290538 vs. ExPASy Swiss-Prot
Match: ZUPT_SHIDS (Zinc transporter zupT OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=zupT PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.098e-25 Identity = 63/162 (38.89%), Postives = 97/162 (59.88%), Query Frame = -3 Query: 276 KDIMKKH----RRQVLFSGIITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVAYLFPSSLSPEILEGLLGSVGGVMAFLTLHEMLPLAFDYAGQKQAVKAVFVGMAFMSASLYFLE 749 +D+M+K + + + I+ +GISLHNFPEG+A F+ + L +G +A+A+ALHNIPEG+AV PVY AT SK A A +SG AE LG ++ + S +SP ++ ++ +V G+M L++ E++PLA + V GM+ M SL L+ Sbjct: 91 QDLMQKSVQPLPKSIKRTAILLTLGISLHNFPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVVGPVYAATGSKRTAILWAGISGLAEILGGVLAWLILGSMISPVVMAAIMAAVAGIMVALSVDELMPLAKEIDPNNNPSYGVLCGMSVMGFSLVLLQ 252
BLAST of CB290538 vs. ExPASy Swiss-Prot
Match: ZUPT_SALAR (Zinc transporter zupT OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=zupT PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.451e-25 Identity = 59/145 (40.69%), Postives = 89/145 (61.38%), Query Frame = -3 Query: 276 SGIITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVAYLFPSSLSPEILEGLLGSVGGVMAFLTLHEMLPLAFDYAGQKQAVKAVFVGMAFMSASLYFLE 710 + ++ +GISLHNFPEG+A F+ + L +G +A+A+ALHNIPEG+AVA PVY AT SK A A +SG AE G ++ + S +SP ++ ++ +V G+M L++ E++PLA + V GM+ M SL L+ Sbjct: 108 TAVLLTLGISLHNFPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVAGPVYAATGSKRTAIFWAGISGMAEIFGGVLAWLILGSLVSPIVMAAIMAAVAGIMVALSVDELMPLAKEIDPNNNPSYGVLCGMSVMGLSLVILQ 252
BLAST of CB290538 vs. ExPASy Swiss-Prot
Match: GUFA_MYXXA (Protein gufA OS=Myxococcus xanthus GN=gufA PE=4 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.052e-12 Identity = 45/134 (33.58%), Postives = 74/134 (55.22%), Query Frame = -3 Query: 312 SGIITAVGISLHNFPEGMAVFLG-SMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVAYLFPSSLSPEILEGLLGSVGGVMAFLTLHEMLPLAFDYAGQKQAVKAVFVG 710 S ++ + ++LHNFPEG+AV + + +GL++A+ I NIPEG+ VAL + + S +A LA L+G EP+G + + SLS +L L GG M ++ HEM+P + +++A + G Sbjct: 111 SALLFVLAMTLHNFPEGLAVGVSFAAPQPELGLSVALGIGAQNIPEGLVVALALRASGASASRAAFLALLTGMVEPVGALF--GVLALSLSSALLPWGLAFAGGAMLYVISHEMIPESHRGGFEREATTGLMWG 242
BLAST of CB290538 vs. ExPASy Swiss-Prot
Match: S39AB_MOUSE (Zinc transporter ZIP11 OS=Mus musculus GN=Slc39a11 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.912e-12 Identity = 47/138 (34.06%), Postives = 68/138 (49.28%), Query Frame = -3 Query: 300 VGISLHNFPEGMAVFLG-------SMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVAYLFPSSLSPEILEGLLGSVGGVMAFLTLHEMLPLAFDYAGQKQAVKAVFVGMAFM 692 + I++HN PEG+AV +G + NLA+ I + N PEG+AV+LP+ A S W+AF LSG EPL + A F L+ IL L G M ++ + +++P A K A A +G M Sbjct: 199 LAITIHNIPEGLAVGVGFGAVEKTASATFESARNLAIGIGIQNFPEGLAVSLPLRGAGFSTWKAFWYGQLSGMVEPLAGVFGA--FAVVLAEPILPYALAFAAGAMVYVVMDDIIPEAQISGNGKLASWASILGFVVM 334
BLAST of CB290538 vs. ExPASy Swiss-Prot
Match: S39AB_RAT (Zinc transporter ZIP11 OS=Rattus norvegicus GN=Slc39a11 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.027e-12 Identity = 46/138 (33.33%), Postives = 68/138 (49.28%), Query Frame = -3 Query: 300 VGISLHNFPEGMAVFLG-------SMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVAYLFPSSLSPEILEGLLGSVGGVMAFLTLHEMLPLAFDYAGQKQAVKAVFVGMAFM 692 + I++HN PEG+AV +G + NLA+ I + N PEG+AV+LP+ A S W+AF LSG EPL + A F L+ +L L G M ++ + +++P A K A A +G M Sbjct: 192 LAITIHNIPEGLAVGVGFGAVEKTASATFESARNLAIGIGIQNFPEGLAVSLPLRGAGFSTWKAFWYGQLSGMVEPLAGVFGA--FAVVLAEPVLPYALAFAAGAMVYVVMDDIIPEAQISGNGKLASWASILGFVVM 327
BLAST of CB290538 vs. ExPASy Swiss-Prot
Match: S39AB_HUMAN (Zinc transporter ZIP11 OS=Homo sapiens GN=SLC39A11 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 9.027e-12 Identity = 47/138 (34.06%), Postives = 68/138 (49.28%), Query Frame = -3 Query: 300 VGISLHNFPEGMAVFLG-------SMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVAYLFPSSLSPEILEGLLGSVGGVMAFLTLHEMLPLAFDYAGQKQAVKAVFVGMAFM 692 + I++HN PEG+AV +G + NLA+ I + N PEG+AV+LP+ A S W+AF LSG EPL + A F L+ IL L G M ++ + +++P A K A A +G M Sbjct: 199 LAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQNFPEGLAVSLPLRGAGFSTWRAFWYGQLSGMVEPLAGVFGA--FAVVLAEPILPYALAFAAGAMVYVVMDDIIPEAQISGNGKLASWASILGFVVM 334
BLAST of CB290538 vs. ExPASy Swiss-Prot
Match: S39AB_BOVIN (Zinc transporter ZIP11 OS=Bos taurus GN=SLC39A11 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.540e-11 Identity = 47/138 (34.06%), Postives = 68/138 (49.28%), Query Frame = -3 Query: 300 VGISLHNFPEGMAVFLG-------SMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVAYLFPSSLSPEILEGLLGSVGGVMAFLTLHEMLPLAFDYAGQKQAVKAVFVGMAFM 692 + I++HN PEG+AV +G + NLA+ I + N PEG+AV+LP+ A S W+AF LSG EPL + A F L+ IL L G M ++ + +++P A K A A +G M Sbjct: 198 LAITIHNIPEGLAVGVGFGAVGKTASATFESARNLALGIGIQNFPEGLAVSLPLRGAGFSTWRAFWYGQLSGMVEPLAGVFGA--FAVVLAEPILPYALAFAAGAMVYVIMDDIIPEAQISGNGKLASWASILGFVVM 333
BLAST of CB290538 vs. ExPASy Swiss-Prot
Match: YQF9_SCHPO (Uncharacterized zinc transporter C126.09 OS=Schizosaccharomyces pombe GN=SPCC126.09 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.642e-11 Identity = 58/164 (35.37%), Postives = 84/164 (51.22%), Query Frame = -3 Query: 273 KHRRQVLFSGIITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAF-KLATLSGFAEPLGVIIVAYLFPSS--LSPEILEGLLGSV----GGVMAFLTLHEMLP--LAFDYAGQKQAVKAVF-VGMAFMSASLYFLEI 734 +H V GI TA+ I LH PEG FL S + G + VA+++HNI EG +A P+Y A +S+ +AF ATLS + PLG +I + + S + L L G + G+M L+L +LP L D++ K+ F +G+ F FLEI Sbjct: 257 EHIHSVYTMGIQTALLICLHKVPEGFITFLAST--VDTGFMVLVAMSIHNIVEGFTIAYPLYLAWKSRPKAFLTAATLSSCSLPLGSLIAFLVMEAGGIGSSDFLNFLYGIIFAGTAGMMLILSLRVILPEALRHDHSENKRHSFICFTIGILF----TLFLEI 414 The following BLAST results are available for this feature:
BLAST of CB290538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290538 ID=CB290538; Name=CB290538; organism=Citrus sinensis; type=EST; length=778bpback to top |