CB290542
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290542 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.963e-16 Identity = 55/148 (37.16%), Postives = 73/148 (49.32%), Query Frame = 3 Query: 156 KKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDE---TPAAAPKSSVKANSQKSV-PKACLSPVQPS-LNQNFDYLNNSDQDYYNNVSILEEKPQVNQYGYLGSFPN--DGE 578 +KS R+R YRG+RQRPWGKWAAEIRDP K RVWLGTF+T RG KAK+NFP+ P S ++ + V P + P+ P L + + + D N+S+ + + G PN DGE Sbjct: 61 EKSNSRQRN--YRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFPEHIRVNPTQLYPSPATSHDRIIVTPPSPPPPIAPDILLDQYGHFQSRSSDSSANLSMNMLSSSSSSLNHQGLRPNLEDGE 206
BLAST of CB290542 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.759e-16 Identity = 39/98 (39.80%), Postives = 57/98 (58.16%), Query Frame = 3 Query: 147 EQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLSP 440 +Q + ++ R+ YRG+RQRPWGKWAAEIRDP K RVWLGTF T +G KAK+NFP+ +++ +++ + V ++ SP Sbjct: 25 DQHQPDQDQPRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQGPTTTTTI-SHAPRGVSESMNSP 121
BLAST of CB290542 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.153e-15 Identity = 43/80 (53.75%), Postives = 48/80 (60.00%), Query Frame = 3 Query: 123 GSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPD 362 GS K E + S ER +K YRG+RQRPWGKWAAEIRDP K RVWLGTF T RG KAK+NFP+ Sbjct: 42 GSAVTKECESSM-SLERPKK--YRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPE 118
BLAST of CB290542 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.506e-15 Identity = 41/109 (37.61%), Postives = 56/109 (51.38%), Query Frame = 3 Query: 177 RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLSPVQPSLNQNFDYLNNSDQDYYN 503 R+ YRG+RQRPWGKWAAEIRDP K RVWLGTF T +G KAK+NFP+ + + +N + + P+ NQ + ++ D +N Sbjct: 86 RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFPERVQLGSNSTYYSSNQIPQMEPQSI----PNYNQYYHDASSGDMLSFN 190
BLAST of CB290542 vs. ExPASy Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.665e-14 Identity = 48/130 (36.92%), Postives = 61/130 (46.92%), Query Frame = 3 Query: 114 KSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPA-------AAPKSSVKANSQKSVPKACLSPVQPSLNQNFDYLNN 482 KS G + V T RK+ +RG+RQRPWG+WAAEIRDPT+G RVWLGT++T ++G A NFP T A SV KS LSP + +F +N Sbjct: 76 KSIGDRKRRSVSPDSDVTRRKK---FRGVRQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNFPVSTTAEVTVTVTETETESVADGGDKSENDVALSPTSVLCDNDFAPFDN 202
BLAST of CB290542 vs. ExPASy Swiss-Prot
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.844e-14 Identity = 49/132 (37.12%), Postives = 67/132 (50.76%), Query Frame = 3 Query: 162 STERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP-------DETPAAAPKSSVKANSQ----KSVPKACLSPVQPSLNQNFDY---------LNNSDQDY 497 ST R+ YRG+R+RPWG++AAEIRDP K RVWLGTF+T +RG KAK NFP + P+A ++ AN+Q + + A PV PS + + + LN+ DY Sbjct: 3 STTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNFPSPLSLDLNHLPSAPSAATAAANNQPHQHQQLWFAAPPPVPPSSDHHHQHHRIFLRTGVLNDKTSDY 134
BLAST of CB290542 vs. ExPASy Swiss-Prot
Match: EF107_ARATH (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF107 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.263e-14 Identity = 43/110 (39.09%), Postives = 60/110 (54.55%), Query Frame = 3 Query: 102 SAGRKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP-DETPAAAPKSSVKANSQKSVPK 425 S+ + S V+ V KK+ + YRG+R+RPWGK+AAEIRDP KG R+WLGTF + +RG+KA +NFP D AP +S + + VP+ Sbjct: 78 SSSSSTTTSPEVETVSNRKKTKRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFPLDAGKYDAPVNSCRKRRRTDVPQ 187
BLAST of CB290542 vs. ExPASy Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.263e-14 Identity = 53/158 (33.54%), Postives = 76/158 (48.10%), Query Frame = 3 Query: 111 RKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAA------PKSSVKANSQKSVPKACLSPVQPSLNQNFDYLNNSDQDYYNNVSILEEKPQVNQYGYLGSFP 566 R + V V A +T ++K +RG+RQRPWGKWAAEIRDP K VR+WLGT+NT +RG A NF TP A P S VK +K+ S+++ ++S+ + VS+L V+++ + S P Sbjct: 98 RAVKSESTVSPVVSATTTTTGEKK--FRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNF-SVTPTTATEKKAPPPSPVKKKKKKNNKSKKSVTASSSISR-----SSSNDCLCSPVSVLRSPFAVDEFSGISSSP 247
BLAST of CB290542 vs. ExPASy Swiss-Prot
Match: ESR1_ARATH (Ethylene-responsive transcription factor ESR1 OS=Arabidopsis thaliana GN=ESR1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.079e-13 Identity = 54/141 (38.30%), Postives = 66/141 (46.81%), Query Frame = 3 Query: 102 SAGRKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKA-CLSPVQP--SLNQNFDYLNNSDQDYYNNVSI 515 S RK + A ST R YRG+R+RPWG++AAEIRDP R WLGTF+T RG KA+ NF T P+ +++KS P A C P P S QNF Y + Q YN SI Sbjct: 33 SRNRKLSSKDTTVTIAGAGSSTTR-----YRGVRRRPWGRYAAEIRDPMSKERRWLGTFDTAEQAACAYDSAARAFRGAKARTNFTYPTAVIMPEPRFSFSNKKSSPSARCPLPSLPLDSSTQNF-YGAPAAQRIYNTQSI 167
BLAST of CB290542 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.404e-13 Identity = 39/89 (43.82%), Postives = 49/89 (55.06%), Query Frame = 3 Query: 150 QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQK 413 + K + K YRG+RQRPWGK+AAEIRDP K G RVWLGTF+T +RG KA +NFP E P++ +K Sbjct: 143 EVTKPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFPLEVGKWKPRADEGEKKRK 231 The following BLAST results are available for this feature:
BLAST of CB290542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290542 ID=CB290542; Name=CB290542; organism=Citrus sinensis; type=EST; length=829bpback to top |