CB290544

Overview
NameCB290544
Unique NameCB290544
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig328 contig Csv1_Contig328:370..1245. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290544 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.025e-25
Identity = 55/90 (61.11%), Postives = 65/90 (72.22%), Query Frame = -2
Query:  603 AVANHPGSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 872
            AVA+ P SV +E  G  FQ Y SGIFTG CGT+ +HGV  VGYGT++G +YWIV+NSWG +WG  GYI MERNVA +  G CGIA   SY
Sbjct:  123 AVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTAQNHGVVIVGYGTQSGKNYWIVRNSWGQNWGNQGYIWMERNVASS-AGLCGIAQLPSY 211          
BLAST of CB290544 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 8.676e-25
Identity = 54/91 (59.34%), Postives = 63/91 (69.23%), Query Frame = -2
Query:  603 KAVANHPGSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 875
            KA+A+ P SVAI+  G  FQ Y  G+F GRCG  LDHGV AVGYG+  G+DY IVKNSWG  WGE GYIR++RN  G   G CGI   AS+
Sbjct:  262 KALAHQPLSVAIDASGREFQFYSGGVFDGRCGVDLDHGVAAVGYGSSKGSDYIIVKNSWGPKWGEKGYIRLKRN-TGKPEGLCGINKMASF 351          
BLAST of CB290544 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.133e-24
Identity = 54/91 (59.34%), Postives = 65/91 (71.43%), Query Frame = -2
Query:  603 KAVANHPGSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 875
            KAVAN P SV ++  G  FQLY +GIFTG C  S +H  T  G  TEN  DYW VKNSWG +WGE+GYIR+ERN+A + +GKCGIA+  SY
Sbjct:  125 KAVANQPVSVTMDAAGRDFQLYRNGIFTGSCNISANHYRTVGGRETENDKDYWTVKNSWGKNWGESGYIRVERNIAES-SGKCGIAISPSY 214          
BLAST of CB290544 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.480e-24
Identity = 51/90 (56.67%), Postives = 65/90 (72.22%), Query Frame = -2
Query:  603 AVANHPGSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 872
            A+AN P SV +E GG  FQLY+SG+F G CGT LDH VTAVGYGT +G +Y I+KNSWG +WGE GY+R++R  +G   G CG+   + Y
Sbjct:  258 ALANQPLSVLVEAGGKPFQLYKSGVFDGPCGTKLDHAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQ-SGNSQGTCGVYKSSYY 346          
BLAST of CB290544 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.000e-21
Identity = 47/90 (52.22%), Postives = 59/90 (65.56%), Query Frame = -2
Query:  603 AVANHPGSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 872
            A+A  P SV +E  G  FQLY+ GIF G CGT +DH VTAVGYG   G  Y ++KNSWG++WGE GYIR++R   G   G CG+   + Y
Sbjct:  256 AIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDHAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKR-APGNSPGVCGLYKSSYY 344          
BLAST of CB290544 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 9.927e-21
Identity = 46/90 (51.11%), Postives = 57/90 (63.33%), Query Frame = -2
Query:  603 AVANHPGSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 872
            A+A+ P SV +E  G  FQ Y+ GIF G CGT +DH VTAVGYG   G  Y ++KNSWG  WGE GYIR+ R  +G   G CG+   + Y
Sbjct:  256 AIAHQPVSVVVESAGRDFQNYKGGIFEGSCGTKVDHAVTAVGYGKSGGKGYILIKNSWGPGWGENGYIRI-RRASGNSPGVCGVYRSSYY 344          
BLAST of CB290544 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.693e-20
Identity = 51/87 (58.62%), Postives = 60/87 (68.97%), Query Frame = -2
Query:  603 PGSVAIEGGGMAFQLYESGIFTGR-CG-TSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 857
            P SVAI+    +FQ Y SG++  + C  T LDHGV AVGYGTE+  DYW+VKNSWGSSWG+AGYI+M RN        CGIA E SY
Sbjct:  236 PISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKMSRN----RDNNCGIASEPSY 318          
BLAST of CB290544 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.693e-20
Identity = 47/87 (54.02%), Postives = 62/87 (71.26%), Query Frame = -2
Query:  615 AVANHPGSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTEN-GADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAM 872
            AV+N P +  I+     FQ Y  G+F+G CGTSL+H +T +GYG ++ G  YWIV+NSWGSSWGE GY+RM R V+ + +G CGIAM
Sbjct:  245 AVSNQPIAALIDASEN-FQYYNGGVFSGPCGTSLNHAITIIGYGQDSSGTKYWIVRNSWGSSWGEGGYVRMARGVSSS-SGVCGIAM 329          
BLAST of CB290544 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 6.434e-20
Identity = 45/91 (49.45%), Postives = 64/91 (70.33%), Query Frame = -2
Query:  603 AVANHPGSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTEN-GADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 872
            AV+N P + A++  G  FQ Y+ G+FTG CGT L+H +  +GYG ++ G  +WIV+NSWG+ WGE GYIR+ R+V+ +  G CGIAM+  Y
Sbjct:  245 AVSNQPIAAALDASGN-FQHYKRGVFTGPCGTRLNHAIVIIGYGQDSSGKKFWIVRNSWGAGWGEGGYIRLARDVSSSF-GLCGIAMDPLY 333          
BLAST of CB290544 vs. ExPASy Swiss-Prot
Match: MDO1_PSEMR (Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.872e-19
Identity = 43/86 (50.00%), Postives = 62/86 (72.09%), Query Frame = -2
Query:  615 AVANHPGSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAM 872
            AV+N P +  I+  G  FQ Y+ G+++G CG SL+H +T +GYG ++   YWIV+NSWGSSWG+ GY+R+ R+V+ +  G CGIAM
Sbjct:  124 AVSNQPIAALIDASGDNFQYYKGGVYSGPCGFSLNHAITIIGYGRDS---YWIVRNSWGSSWGQGGYVRIRRDVSHS-GGVCGIAM 205          
The following BLAST results are available for this feature:
BLAST of CB290544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
ERVB_TABDI1.025e-2561.11Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
XCP2_ARATH8.676e-2559.34Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
CPGP1_ZINOF1.133e-2459.34Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]
PAPA2_CARPA1.480e-2456.67Chymopapain OS=Carica papaya PE=1 SV=2[more]
PAPA3_CARPA2.000e-2152.22Caricain OS=Carica papaya PE=1 SV=2[more]
PAPA4_CARPA9.927e-2151.11Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CYSP3_HOMAM1.693e-2058.62Digestive cysteine proteinase 3 OS=Homarus america... [more]
BROM1_ANACO1.693e-2054.02Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
ANAN_ANACO6.434e-2049.45Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
MDO1_PSEMR1.872e-1950.00Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cb07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cb07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290544 ID=CB290544; Name=CB290544; organism=Citrus sinensis; type=EST; length=876bp
TTTTTTTTTTTTTTTTTAGATAACAACAATTTGTTTGTGCATTGCCCTTT
ATTCAACGCAGATAGATAACTTACAACGCTATATACCCAACCAACGTCCG
AATAAATATTTAACAGACCATCCACCTGCCGGTACATTAACGTTTGGAAT
GAAATGCAGTAGAATGAACTAAGGCCGGGGAGAAACTCATTCACAAGCAC
GAATATTTTCATCCTCCCTTCGGCCTTCCACTGCTCTTACAGTGCCAACT
ATAATTAAGCACTGCTACTTCCACCTTGATTTCCATGAGCCCAGTAAGGT
TTAGCAGGGGTGCGTCGTAATGCCCTCACTCCCAATGGGTTGTCCTTGCT
CATCAAGCAGGTCCCAGCACGAACATTACAGATGGGATAGTCATGTGGGC
AGCAGCTATAGGGGTCATCACAGCAGGTGGCAGCCTCAAGCGGGCAGCAT
CCCCATGCAAAGCAAGAGTTACCATACTCAAAGACACAGCAGCAAGTGTT
GCTCTCAGGGCAAGAGTAATAATTGTCACACACAGCAGGAGGCTTTGTTG
GAGATGGAGGGGACGGTCCAGGGTTGGGAGGATTTTGGCCTTTCTTTATG
GGATATGAGGCCTCCATGGCAATTCCACACTTGCCCGTGAGAGTGCCAGC
CACGTTACGCTCCATCCTAATATAGCCAGCCTCTCCCCAGCTACTGCCCC
ATGAATTCTTCACAATCCAGTAATCAGCTCCATTTTCTGTGCCATATCCA
ACAGCAGTAACACCATGGTCCAGAGATGTCCCACATCTTCCCGTAAATAT
ACCCGATTCATATAACTGGAATGCCATGCCACCTCCTTCAATGGCAACAC
TCCCGGGGTGATTTGCAACTGCCTTT
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