CB290545

Overview
NameCB290545
Unique NameCB290545
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length750
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.436e-67
Identity = 127/247 (51.42%), Postives = 173/247 (70.04%), Query Frame = 2
Query:   20 SSALDMSIVSYDKTHESKSSSWRT----DDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCD-TYRKNAKVVTIDDYEDVPLNDEKAL 745
            ++A+DMS+VS +  H   +   R     D E   MFE+W+VKHGK Y+++ EKE+R  IF++NLRFI   N+EN +Y++GLNRFADL+  EY  +  GA     R  +    SNRY    G+ LP SVDWR +GAV EVKDQG C SCWAFST+ AVEG+NKIVTG L++LSEQ+L++C+   N GC GG ++ A+EFI++NGG+ T+ DYPYKA++G C+   +++ K V ID YE++P NDE AL
Sbjct:   21 ATAMDMSVVSSNDNHHVTAGPGRRQGIFDAEATLMFESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLHEYGEICHGADPRPPRNHVFMTSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE-NNGCGGGKVETAYEFIMNNGGLGTDNDYPYKALNGVCEGRLKEDNKNVMIDGYENLPANDEAAL 266          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.179e-67
Identity = 125/243 (51.44%), Postives = 170/243 (69.96%), Query Frame = 2
Query:   20 SSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCD-TYRKNAKVVTIDDYEDVPLNDEKAL 745
            ++A+DMS+VSYD  +   S     D E   +FE+W+VKHGK Y ++ EKE+R  IF++NLRFI+  N+EN +Y++GL  FADL+  EY+ +  GA     R  +    S+RY     + LP SVDWR +GAV EVKDQG C SCWAFST+ AVEG+NKIVTG L++LSEQ+L++C+   N GC GG ++ A+EFI+ NGG+ T+ DYPYKA++G CD   ++N K V ID YE++P NDE AL
Sbjct:   21 ATAIDMSVVSYDDNNRLHSVF---DAEASLIFESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAENLSYRLGLTGFADLSLHEYKEVCHGADPRPPRNHVFMTSSDRYKTSADDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE-NNGCGGGKLETAYEFIMKNGGLGTDNDYPYKAVNGVCDGRLKENNKNVMIDGYENLPANDESAL 259          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 246.514 bits (628), Expect = 1.138e-64
Identity = 130/249 (52.21%), Postives = 168/249 (67.47%), Query Frame = 2
Query:   35 MSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKH------GKAYNALGEKEKRFEIFKENLRFIDEHNS---ENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAV-AEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTS-YNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQ 748
            MSI+ Y+  H  +    RT+ E  A ++ WL +H      G     +GE E+RF +F +NL+F+D HN+   E   +++G+NRFADLTN E+R+ +LG     +   +       Y     EALPDSVDWR KGAV A VK+QG CGSCWAFS +AAVEGINKIVTG L+SLSEQELV+C  +  N GCNGG+MD AF FI  NGG+DTEEDYPY A+DG C+  +++ KVV+ID +EDVP NDE +LQ
Sbjct:   37 MSIIRYNAEHGVRGLE-RTEAEARAAYDLWLARHRRGGGGGSRNGFIGEHERRFRVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNGEFRATYLGTTPAGRGRRV----GEAYRHDGVEALPDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECARNGQNSGCNGGIMDDAFAFIARNGGLDTEEDYPYTAMDGKCNLAKRSRKVVSIDGFEDVPENDELSLQ 280          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.138e-64
Identity = 125/249 (50.20%), Postives = 163/249 (65.46%), Query Frame = 2
Query:    2 FFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSN-RYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKAL 745
            F L  +S AL ++I      HE +  S   ++ +  ++E W   H     +L EK+KRF +FK N   +   N  ++ YK+ LN+FAD+TN E+R+ + G++    R      R N  ++    + +P SVDWRKKGAV  VKDQG CGSCWAFSTI AVEGIN+I T  L+SLSEQELVDCDT  N+GCNGGLMDYAFEFI   GGI TE +YPY+A DG+CD  ++NA  V+ID +E+VP NDE AL
Sbjct:    4 FILLALSLALVLAITESFDFHEKELES---EESLWGLYERWR-SHHTVSRSLHEKQKRFNVFKHNAMHVHNANKMDKPYKLKLNKFADMTNHEFRNTYSGSKVKHHRMFRGGPRGNGTFMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENAL 248          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.538e-61
Identity = 122/248 (49.19%), Postives = 164/248 (66.13%), Query Frame = 2
Query:   11 FTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTS--LKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKAL 745
            F   + + +S +S  ++         ++D +  ++E W   H  A + L EK +RF +FKEN++FI E N + +  YK+ LN+F D+TN+E+RS + G++    R+   ++    +     VG     S+DWR KGAV  VKDQG CGSCWAFSTIA+VEGIN+I TG L+SLSEQELVDCDTSYNEGCNGGLMDYAFEFI  N GI TE+ YPY   DG+C +   N+ VV+ID ++DVP N+E AL
Sbjct:    6 FIALALVALSFLSIAQSIPFTEKDLASEDSLWNLYEKWRTHHTVARD-LDEKNRRFNVFKENVKFIHEFNQKKDAPYKLALNKFGDMTNQEFRSKYAGSKIQHHRSQRGIQKNTGSFMYENVGSLPAASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCDTSYNEGCNGGLMDYAFEFIQKN-GITTEDSYPYAEQDGTCASNLLNSPVVSIDGHQDVPANNENAL 251          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.701e-60
Identity = 106/140 (75.71%), Postives = 123/140 (87.86%), Query Frame = 2
Query:  329 LKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQ 748
            L   +S+RYLP+VG++LP+S+DWR+KG +  VKDQGSCGSCWAFS +AA+E IN IVTG+LISLSEQELVDCD SYNEGC+GGLMDYAFEF+I NGGIDTEEDYPYK  +G CD YRKNAKVV ID YEDVP+N+EKALQ
Sbjct:    2 LSKNKSDRYLPKVGDSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPYKERNGVCDQYRKNAKVVKIDSYEDVPVNNEKALQ 141          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 231.491 bits (589), Expect = 3.789e-60
Identity = 117/233 (50.21%), Postives = 152/233 (65.24%), Query Frame = 2
Query:   50 YDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSN-RYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKAL 745
            +DK   S+ S W        ++E W   H     +LGEK KRF +FK NL  +   N  ++ YK+ LN+FAD+TN E+RS + G++    R    +   N  ++     ++P SVDWRKKGAV +VKDQG CGSCWAFST+ AVEGIN+I T  L++LSEQELVDCD   N+GCNGGLM+ AFEFI   GGI TE +YPYKA +G+CD  + N   V+ID +E+VP NDE AL
Sbjct:   26 HDKDLASEESLWD-------LYERWR-SHHTVSRSLGEKHKRFNVFKANLMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHPRMFRGTPHENGAFMYEKVVSVPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVDCDKEENQGCNGGLMESAFEFIKQKGGITTESNYPYKAQEGTCDASKVNDLAVSIDGHENVPANDEDAL 250          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 6.462e-60
Identity = 117/233 (50.21%), Postives = 154/233 (66.09%), Query Frame = 2
Query:   50 YDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKR-SNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKAL 745
            ++K  ES+ S W        ++E W   H     +LGEK KRF +FK N+  +   N  ++ YK+ LN+FAD+TN E+RS + G++    +    S+  S  ++     ++P SVDWRKKGAV +VKDQG CGSCWAFSTI AVEGIN+I T  L+SLSEQELVDCD   N+GCNGGLM+ AFEFI   GGI TE +YPY A +G+CD  + N   V+ID +E+VP+NDE AL
Sbjct:   26 HEKDLESEESLWD-------LYERWR-SHHTVSRSLGEKHKRFNVFKANVMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHHKMFRGSQHGSGTFMYEKVGSVPASVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDKEENQGCNGGLMESAFEFIKQKGGITTESNYPYTAQEGTCDESKVNDLAVSIDGHENVPVNDENAL 250          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.189e-59
Identity = 122/245 (49.80%), Postives = 169/245 (68.98%), Query Frame = 2
Query:   29 LDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVA-EVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDT-SYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAID-GSCDTYR-KNAKVVTIDDYEDVPLNDEKALQ 748
            L + ++S      + + S R + EV+ M+E WLV++GK YN LGEKE+RF+IFK+NL+ I+EHNS+ NR+Y+ GLN+F+DLT +E+++ +LG +   K  S     + RY  + G+ LPD VDWR++GAV   VK QG CGSCWAF+   AVEGIN+I TG L+SLSEQEL+DCD  + N GC GG   +AFEFI +NGGI ++E Y Y   D  +C     K  +VVTI+ +E VP+NDE +L+
Sbjct:   13 LSVLLISISLGVVTATESQRNEGEVLTMYEQWLVENGKNYNGLGEKERRFKIFKDNLKRIEEHNSDPNRSYERGLNKFSDLTADEFQASYLGGKMEKKSLS---DVAERYQYKEGDVLPDEVDWRERGAVVPRVKRQGECGSCWAFAATGAVEGINQITTGELVSLSEQELIDCDRGNDNFGCAGGGAVWAFEFIKENGGIVSDEVYGYTGEDTAACKAIEMKTTRVVTINGHEVVPVNDEMSLK 254          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.353e-51
Identity = 110/235 (46.81%), Postives = 141/235 (60.00%), Query Frame = 2
Query:   53 DKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR---KNAKVVTIDDYEDVPLNDEKAL 745
            DK  ES+ + W        ++E W   H +      EK +RF  FK N  FI  HN   +  Y++ LNRF D+   E+R+  +G       +   S     Y       LP SVDWR+KGAV  VKDQG CGSCWAFST+ +VEGIN I TGSL+SLSEQEL+DCDT+ N+GC GGLMD AFE+I +NGG+ TE  YPY+A  G+C+  R    +  VV ID ++DVP N E+ L
Sbjct:   33 DKDLESEEALWD-------LYERWQSAH-RVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPSKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDL 259          
The following BLAST results are available for this feature:
BLAST of CB290545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CPR4_ARATH1.436e-6751.42Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CPR3_ARATH4.179e-6751.44Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CYSP1_ORYSJ1.138e-6452.21Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CYSEP_RICCO1.138e-6450.20Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CYSP_HEMSP1.538e-6149.19Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CYSPL_SOLLC1.701e-6075.71Low-temperature-induced cysteine proteinase (Fragm... [more]
CYSEP_PHAVU3.789e-6050.21Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CYSEP_VIGMU6.462e-6050.21Vignain OS=Vigna mungo PE=1 SV=1[more]
CPR2_ARATH4.189e-5949.80Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CYSP2_HORVU9.353e-5146.81Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cb07_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cb07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290545 ID=CB290545; Name=CB290545; organism=Citrus sinensis; type=EST; length=750bp
TTTTTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTATCTT
ATGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAG
GTTATGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTTATAA
CGCTTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAATCTTA
GGTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTG
AACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATCTGGG
TGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCAACC
GTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGG
AAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTG
CTGGGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTA
CAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACA
TCATATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTT
CATTATTGATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAG
CCATTGATGGTAGCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACA
ATTGATGACTATGAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAA
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