CB290545

Overview
NameCB290545
Unique NameCB290545
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length750
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CYSP_THEAN (Cysteine proteinase OS=Theileria annulata GN=TACP PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 7.463e-24
Identity = 74/241 (30.71%), Postives = 127/241 (52.70%), Query Frame = 2
Query:   74 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLK--------SKRSNRYLPRVGEA------------LPDSVDWRKKGAVAEVKDQGS-CGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLND 733
            +S   ++ +++  F+A++ K+ K + +  ++ +RF  F++N   +  H      Y + LN+F+DL++EE+++++         TSL         S ++  Y+ ++ +A              ++++W +  AV+ +KDQG  CGSCWAFS+IA+VE + ++       LSEQELV+CD S + GC GGL   A E+ I + G+  E + PY  I   C    KN   V ID    +  ND
Sbjct:  107 TSDAESELDMLIEFDAFVEKYKKVHRSFDQRVQRFLTFRKNYHIVKTHKP-TEPYSLDLNKFSDLSDEEFKALYPVITPPKTYTSLSKHLEFKKMSHKNPIYISKLKKAKGIEEIKDLSLITGENLNWARTDAVSPIKDQGDHCGSCWAFSSIASVESLYRLYKNKSYFLSEQELVNCDKS-SMGCAGGLPITALEY-IHSKGVSFESEVPYTGIVSPCKPSIKNK--VFIDSISILKGND 342          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CATW_FELCA (Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.837e-23
Identity = 73/235 (31.06%), Postives = 121/235 (51.49%), Query Frame = 2
Query:   77 SSWRTDD------EVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENR-TYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYL--PRVGEALPDSVDWRK-KGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR----KNAKVVTIDDYEDVPLNDEK 739
            SS R+ D      E+   F  + +++ ++Y+   E  +R +IF  NL    +   E+  T + G+  F+DLT EE+     G  +G +R   ++ +  R +     GE++P + DWRK  G ++ VK Q SC  CWA +    +E +  I     + LS QEL+DC     +GC GG +  AF  +++N G+ +E+DYP++   G    +R    K  KV  I D+  +P N++K
Sbjct:   24 SSLRSQDPGPQPLELKQAFTLFQIQYNRSYSNPEEYARRLDIFAHNLAQAQQLEEEDLGTAEFGVTPFSDLTEEEF-----GRLYGHRRMDGEAPKVGREVGSEEWGESVPPTCDWRKLDGVISSVKKQESCSCCWAMAAAGNIEALWAIKYRQSVELSVQELLDCGRC-GDGCRGGFVWDAFITVLNNSGLASEKDYPFQ---GQVKPHRCLAKKRTKVAWIQDFIMLPDNEQK 249          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CATL3_PARTE (Putative cathepsin L 3 OS=Paramecium tetraurelia GN=GSPATT00022199001 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.135e-22
Identity = 69/197 (35.03%), Postives = 106/197 (53.81%), Query Frame = 2
Query:  113 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNS-ENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPD-------SVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR 679
            FE W +K+ K Y    EK  R EI+  N R I+EHN  E+ TY++G N+F  L++EE+  ++L             ++S+  +  +G +LP+       +VDWR       VK+QG C S WAFS   ++E    I     I+ S Q++VDCD + N GC+GG   YA E+++   G+ +  +YPY A + +C   R
Sbjct:   29 FERWALKNNKFYTE-SEKLYRMEIYNSNKRMIEEHNQREDVTYQMGENQFMTLSHEEFVDLYL-------------QKSDSSVNIMGASLPEVQLEGLGAVDWRN---YTTVKEQGQCASGWAFSVSNSLEAWYAIRGFQKINASTQQIVDCDYN-NTGCSGGYNAYAMEYVL-RVGLVSSTNYPYVAKNQTCKQSR 206          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CATW_MOUSE (Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.123e-22
Identity = 69/221 (31.22%), Postives = 118/221 (53.39%), Query Frame = 2
Query:   98 EVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENR-TYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKR--SNRYLPRVGEALPDSVDWRK-KGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR----KNAKVVTIDDYEDVPLNDE 736
            E+  +F+ + ++  ++Y    E  +R  IF  NL        E+  T + G   F+DLT EE+  ++ G     +RT   +K+  SN +    GE++P + DWRK K  ++ VK+QGSC  CWA +    ++ + +I     + +S QEL+DC+   N GCNGG +  A+  +++N G+ +E+DYP++   G    +R    K  KV  I D+  +  N++
Sbjct:   35 ELKEVFKLFQIRFNRSYWNPAEYTRRLSIFAHNLAQAQRLQQEDLGTAEFGETPFSDLTEEEFGQLY-GQERSPERTPNMTKKVESNTW----GESVPRTCDWRKAKNIISSVKNQGSCKCCWAMAAADNIQALWRIKHQQFVDVSVQELLDCERCGN-GCNGGFVWDAYLTVLNNSGLASEKDYPFQ---GDRKPHRCLAKKYKKVAWIQDFTMLSNNEQ 246          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CYSP_THEPA (Cysteine proteinase OS=Theileria parva GN=TP03_0285 PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.654e-21
Identity = 68/222 (30.63%), Postives = 108/222 (48.65%), Query Frame = 2
Query:   98 EVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHL-----GARFGAKRTSLKSKRSNRYLPRVGEALP------------DSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDY 712
            EV   FE +  K+ + +    E+  R   F+ N   + E   +   Y  G+NRF+DLT  E+  +        A +      L    +  YL  + +AL             +++DWR+  +V  VKDQ +CG CWAFST+ +VEG           LS QEL+DCD S++ GC GGL++ A+E+ +   G+ + +D P+  +D +       AK V++  Y
Sbjct:  120 EVYREFEEFNSKYNRRHATQQERLNRLVTFRSNYLEVKEQKGDE-PYVKGINRFSDLTEREFYKLFPVMKPPKATYSNGYYLLSHMANKTYLKNLKKALNTDEDVDLAKLTGENLDWRRSSSVTSVKDQSNCGGCWAFSTVGSVEGYYMSHFDKSYELSVQELLDCD-SFSNGCQGGLLESAYEY-VRKYGLVSAKDLPF--VDKARRCSVPKAKKVSVPSY 336          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.009e-20
Identity = 63/201 (31.34%), Postives = 109/201 (54.23%), Query Frame = 2
Query:  125 LVKHGKAYNALGEKEKRFEIFKENL---RFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFG-AKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNG-GIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDY 712
            L +HG A       ++     +E+L   R+++    EN T   G+N+F+ L  EE+++++LG+++  A R   + +R    +P V  +LP   DWR K  V  V++Q  CG CWAFS ++A+E    I   SL  LS Q+++DC  + N GC GG    A  ++ +    +  +  YP+KA++G C  + ++   V++ D+
Sbjct:   16 LGRHGVAGTWSWSHQREAAALRESLHRHRYLNSFPHENSTAFYGVNQFSYLFPEEFKALYLGSKYAWAPRYPAEGQRP---IPNV--SLPLRFDWRDKHVVNPVRNQEMCGGCWAFSVVSAIESARAIQGKSLDYLSVQQVIDCSFN-NSGCLGGSPLCALRWLNETQLKLVADSQYPFKAVNGQCRHFPQSQAGVSVKDF 210          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CATW_HUMAN (Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 6.538e-20
Identity = 66/223 (29.60%), Postives = 112/223 (50.22%), Query Frame = 2
Query:   98 EVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENR-TYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRK-KGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR----KNAKVVTIDDYEDVPLNDEKALQ 748
            E+   F+ + ++  ++Y +  E   R +IF  NL        E+  T + G+  F+DLT EE+  ++ G R  A       +      P   E++P S DWRK   A++ +KDQ +C  CWA +    +E + +I     + +S QEL+DC     +GC+GG +  AF  +++N G+ +E+DYP++   G    +R    K  KV  I D+  +  N+ +  Q
Sbjct:   37 ELKEAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEFGQLY-GYRRAAGGVPSMGREIRSEEPE--ESVPFSCDWRKVASAISPIKDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVQELLDCGRC-GDGCHGGFVWDAFITVLNNSGLASEKDYPFQ---GKVRAHRCHPKKYQKVAWIQDFIMLQNNEHRIAQ 252          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVN (Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.539e-20
Identity = 73/221 (33.03%), Postives = 111/221 (50.23%), Query Frame = 2
Query:   71 KSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNS----ENRTYKVGLNRFADLTNEEYRS---------MHLGARFGAKRTSLKSKRSNRYLPRV---GEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSL-ISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKA-IDGSCDTYR 679
            K  S + + +  + F  ++ ++ K Y  + E+ +RFE FK       +HN        TY   +N+++D + EE+ +         M L +++      LK   +N  L  V    +  PDS D+R K      KDQG+CGSCWAF+ I   E +       + IS SEQ++VDC T  N GC+GG   YAF ++I+N G+   ++YPYK   D  C  YR
Sbjct:  148 KLESMQDNIKYASKFFKYMKENNKKYENMDEQLQRFENFKIRYMKTQKHNEMVGKNGLTYVQKVNQYSDFSKEEFDNYFKKLLSVPMDLKSKY---IVPLKKHLANTNLISVDNKSKDFPDSRDYRSKFNFLPPKDQGNCGSCWAFAAIGNFEYLYVHTRHEMPISFSEQQMVDCSTE-NYGCDGGNPFYAFLYMINN-GVCLGDEYPYKGHEDFFCLNYR 363          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CATO_HUMAN (Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.685e-18
Identity = 63/198 (31.82%), Postives = 104/198 (52.53%), Query Frame = 2
Query:  164 KEKRFEIFKENL---RFIDE-HNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIID-NGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEK 739
            +E+    F+E+L   R+++    SEN T   G+N+F+ L  EE+++++L ++    +    S   +  +P V  +LP   DWR K  V +V++Q  CG CWAFS + AVE    I    L  LS Q+++DC  SYN  GCNGG    A  ++      +  + +YP+KA +G C  +  +    +I  Y     +D++
Sbjct:   37 REREAAAFRESLNRHRYLNSLFPSENSTAFYGINQFSYLFPEEFKAIYLRSK--PSKFPRYSAEVHMSIPNV--SLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDC--SYNNYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFSDQE 228          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: PEPT1_PSOOV (Peptidase 1 OS=Psoroptes ovis PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.044e-17
Identity = 74/248 (29.84%), Postives = 117/248 (47.18%), Query Frame = 2
Query:    5 FLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGA--RFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDV-PLNDEK 739
            F+  ++S L +S+V       +  S  RT +E    F     KH     A  E  + F    E++          +  K  +N+F+D++ EE+++ +L +   + A +         +        +P+ +D R  G V ++K+Q +CGSCWAFS +A VE          + LSEQELVDC + +  GC G  +     +I  NG ++ E+ YPYKA +G C   R NAK   I D   + P N +K
Sbjct:    3 FVLAIASLLVLSVVY------AYPSEIRTFEEFKKAFN----KHYVTPEAEQEARQNFLASLEHIE---------KAGKGRINQFSDMSLEEFKNQYLMSDQAYEALKKEFDLDAGAQACQIGAVNIPNEIDLRALGYVTKIKNQVACGSCWAFSGVATVESNYLSYDNVSLDLSEQELVDCASQH--GCGGDTVLNGLRYIQKNGVVE-EQSYPYKAREGRCQ--RPNAKRYGIKDLCQIYPPNGDK 226          
The following BLAST results are available for this feature:
BLAST of CB290545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CYSP_THEAN7.463e-2430.71Cysteine proteinase OS=Theileria annulata GN=TACP ... [more]
CATW_FELCA4.837e-2331.06Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2[more]
CATL3_PARTE3.135e-2235.03Putative cathepsin L 3 OS=Paramecium tetraurelia G... [more]
CATW_MOUSE9.123e-2231.22Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1[more]
CYSP_THEPA2.654e-2130.63Cysteine proteinase OS=Theileria parva GN=TP03_028... [more]
CATO_MOUSE1.009e-2031.34Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]
CATW_HUMAN6.538e-2029.60Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2[more]
CYSP_PLAVN8.539e-2033.03Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=... [more]
CATO_HUMAN4.685e-1831.82Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1[more]
PEPT1_PSOOV1.044e-1729.84Peptidase 1 OS=Psoroptes ovis PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cb07_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cb07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290545 ID=CB290545; Name=CB290545; organism=Citrus sinensis; type=EST; length=750bp
TTTTTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTATCTT
ATGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAG
GTTATGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTTATAA
CGCTTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAATCTTA
GGTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTG
AACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATCTGGG
TGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCAACC
GTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGG
AAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTG
CTGGGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTA
CAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACA
TCATATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTT
CATTATTGATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAG
CCATTGATGGTAGCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACA
ATTGATGACTATGAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAA
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